Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5887
(645 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D50406-1|BAA34060.1| 971|Homo sapiens ST15 protein. 81 4e-15
AL158830-3|CAD13384.2| 971|Homo sapiens reversion-inducing-cyst... 81 4e-15
AL138834-5|CAH70155.1| 971|Homo sapiens reversion-inducing-cyst... 81 4e-15
BC060806-1|AAH60806.1| 225|Homo sapiens RECK protein protein. 46 1e-04
AK131285-1|BAD18459.1| 736|Homo sapiens protein ( Homo sapiens ... 38 0.040
BC037574-1|AAH37574.1| 366|Homo sapiens ubiquitin specific pept... 33 0.87
AK024318-1|BAB14881.1| 366|Homo sapiens protein ( Homo sapiens ... 33 0.87
AK022614-1|BAB14133.1| 366|Homo sapiens protein ( Homo sapiens ... 33 0.87
Y08418-1|CAA69695.1| 503|Homo sapiens nicotinic acetylcholine r... 32 2.0
X53559-1|CAA37625.1| 474|Homo sapiens neuronal nicotinic acetyl... 32 2.0
U62432-1|AAB40110.1| 504|Homo sapiens nicotinic acetylcholine r... 32 2.0
M86383-1|AAC84176.1| 502|Homo sapiens nicotinic acetylcholine r... 32 2.0
M37981-1|AAA59942.1| 503|Homo sapiens neuronal nicotinic acetyl... 32 2.0
BT006897-1|AAP35543.1| 505|Homo sapiens cholinergic receptor, n... 32 2.0
BT006646-1|AAP35292.1| 489|Homo sapiens cholinergic receptor, n... 32 2.0
BC098443-1|AAH98443.1| 504|Homo sapiens cholinergic receptor, n... 32 2.0
BC006114-1|AAH06114.1| 489|Homo sapiens CHRNA3 protein protein. 32 2.0
BC002996-1|AAH02996.1| 505|Homo sapiens cholinergic receptor, n... 32 2.0
BC001642-1|AAH01642.1| 505|Homo sapiens cholinergic receptor, n... 32 2.0
BC000513-1|AAH00513.1| 505|Homo sapiens cholinergic receptor, n... 32 2.0
AJ007783-1|CAA07682.1| 504|Homo sapiens nicotinic acetylcholine... 32 2.0
AF385584-1|AAK68110.1| 489|Homo sapiens nicotinic cholinergic r... 32 2.0
AK026410-1|BAB15475.1| 793|Homo sapiens protein ( Homo sapiens ... 31 3.5
DQ462572-1|ABE73209.1| 205|Homo sapiens endothelial cell-specif... 30 6.1
DQ112698-1|AAY99942.1| 318|Homo sapiens NADH dehydrogenase subu... 30 8.1
>D50406-1|BAA34060.1| 971|Homo sapiens ST15 protein.
Length = 971
Score = 80.6 bits (190), Expect = 4e-15
Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Frame = +3
Query: 63 LTESCRRSDEIAMFDCMDKQQEAQWCCSQT-QSVSCHEACQKVLRRLGHSRIDGDAKEAA 239
+++ CR+ E A+F C+ + + CCS +C E CQ + R G ++ A
Sbjct: 126 ISKVCRKEYENALFSCISRNEMGSVCCSYAGHHTNCREYCQAIFRT---DSSPGPSQIKA 182
Query: 240 VDA-CEQ-SPELLHCLRDLTSSTVVGDTSKYLPCCHESDSQSCRSTCESVLRRTSDIEEI 413
V+ C SP+L+HC+ + T S + + + L CC ++ +C++ C+ +L EI
Sbjct: 183 VENYCASISPQLIHCVNNYTQSYPMRNPTDSLYCCDRAEDHACQNACKRILMSKKTEMEI 242
Query: 414 VEALGQDCGA-PAIHNVLWQCFL 479
V+ L + C P + LWQCFL
Sbjct: 243 VDGLIEGCKTQPLPQDPLWQCFL 265
Score = 44.8 bits (101), Expect = 3e-04
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = +1
Query: 523 DVANLHCCLKAKSATCKELC--FHTFNKGSQEKWDMFDLQC 639
D A LHCC KA ++TC+ELC ++ + G+ + W FD C
Sbjct: 286 DGAKLHCCSKANTSTCRELCTKLYSMSWGNTQSWQEFDRFC 326
Score = 34.3 bits (75), Expect = 0.38
Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 12/100 (12%)
Frame = +3
Query: 111 MDKQQEAQWCCSQTQSVSCHEACQKVL--RRLGHSRIDGDAKEAAVDACEQSPELLHCLR 284
M ++ +CC + + +C AC+++L ++ +DG + Q P L C
Sbjct: 207 MRNPTDSLYCCDRAEDHACQNACKRILMSKKTEMEIVDGLIEGCKTQPLPQDP-LWQCFL 265
Query: 285 DLTSSTVVGDT----------SKYLPCCHESDSQSCRSTC 374
+ + S G T L CC ++++ +CR C
Sbjct: 266 ESSQSVHPGVTVHPPPSTGLDGAKLHCCSKANTSTCRELC 305
Score = 30.3 bits (65), Expect = 6.1
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 6/79 (7%)
Frame = +3
Query: 333 CC-HESDSQSCRSTCESVLRRTSD--IEEIVEALGQDCGAPAIHNVLWQCFLRKDAP--- 494
CC H D+Q CR CE + S+ ++ +++ C P +W C + P
Sbjct: 37 CCNHSKDNQMCRDVCEQIFSSKSESRLKHLLQRAPDYC--PETMVEIWNC-MNSSLPGVF 93
Query: 495 TDTKDLIP*GRCEFALLFE 551
+ + G CE A+ E
Sbjct: 94 KKSDGWVGLGCCELAIALE 112
>AL158830-3|CAD13384.2| 971|Homo sapiens
reversion-inducing-cysteine-rich protein with kazal
motifs protein.
Length = 971
Score = 80.6 bits (190), Expect = 4e-15
Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Frame = +3
Query: 63 LTESCRRSDEIAMFDCMDKQQEAQWCCSQT-QSVSCHEACQKVLRRLGHSRIDGDAKEAA 239
+++ CR+ E A+F C+ + + CCS +C E CQ + R G ++ A
Sbjct: 126 ISKVCRKEYENALFSCISRNEMGSVCCSYAGHHTNCREYCQAIFRT---DSSPGPSQIKA 182
Query: 240 VDA-CEQ-SPELLHCLRDLTSSTVVGDTSKYLPCCHESDSQSCRSTCESVLRRTSDIEEI 413
V+ C SP+L+HC+ + T S + + + L CC ++ +C++ C+ +L EI
Sbjct: 183 VENYCASISPQLIHCVNNYTQSYPMRNPTDSLYCCDRAEDHACQNACKRILMSKKTEMEI 242
Query: 414 VEALGQDCGA-PAIHNVLWQCFL 479
V+ L + C P + LWQCFL
Sbjct: 243 VDGLIEGCKTQPLPQDPLWQCFL 265
Score = 44.8 bits (101), Expect = 3e-04
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = +1
Query: 523 DVANLHCCLKAKSATCKELC--FHTFNKGSQEKWDMFDLQC 639
D A LHCC KA ++TC+ELC ++ + G+ + W FD C
Sbjct: 286 DGAKLHCCSKANTSTCRELCTKLYSMSWGNTQSWQEFDRFC 326
Score = 34.3 bits (75), Expect = 0.38
Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 12/100 (12%)
Frame = +3
Query: 111 MDKQQEAQWCCSQTQSVSCHEACQKVL--RRLGHSRIDGDAKEAAVDACEQSPELLHCLR 284
M ++ +CC + + +C AC+++L ++ +DG + Q P L C
Sbjct: 207 MRNPTDSLYCCDRAEDHACQNACKRILMSKKTEMEIVDGLIEGCKTQPLPQDP-LWQCFL 265
Query: 285 DLTSSTVVGDT----------SKYLPCCHESDSQSCRSTC 374
+ + S G T L CC ++++ +CR C
Sbjct: 266 ESSQSVHPGVTVHPPPSTGLDGAKLHCCSKANTSTCRELC 305
Score = 30.3 bits (65), Expect = 6.1
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 6/79 (7%)
Frame = +3
Query: 333 CC-HESDSQSCRSTCESVLRRTSD--IEEIVEALGQDCGAPAIHNVLWQCFLRKDAP--- 494
CC H D+Q CR CE + S+ ++ +++ C P +W C + P
Sbjct: 37 CCNHSKDNQMCRDVCEQIFSSKSESRLKHLLQRAPDYC--PETMVEIWNC-MNSSLPGVF 93
Query: 495 TDTKDLIP*GRCEFALLFE 551
+ + G CE A+ E
Sbjct: 94 KKSDGWVGLGCCELAIALE 112
>AL138834-5|CAH70155.1| 971|Homo sapiens
reversion-inducing-cysteine-rich protein with kazal
motifs protein.
Length = 971
Score = 80.6 bits (190), Expect = 4e-15
Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Frame = +3
Query: 63 LTESCRRSDEIAMFDCMDKQQEAQWCCSQT-QSVSCHEACQKVLRRLGHSRIDGDAKEAA 239
+++ CR+ E A+F C+ + + CCS +C E CQ + R G ++ A
Sbjct: 126 ISKVCRKEYENALFSCISRNEMGSVCCSYAGHHTNCREYCQAIFRT---DSSPGPSQIKA 182
Query: 240 VDA-CEQ-SPELLHCLRDLTSSTVVGDTSKYLPCCHESDSQSCRSTCESVLRRTSDIEEI 413
V+ C SP+L+HC+ + T S + + + L CC ++ +C++ C+ +L EI
Sbjct: 183 VENYCASISPQLIHCVNNYTQSYPMRNPTDSLYCCDRAEDHACQNACKRILMSKKTEMEI 242
Query: 414 VEALGQDCGA-PAIHNVLWQCFL 479
V+ L + C P + LWQCFL
Sbjct: 243 VDGLIEGCKTQPLPQDPLWQCFL 265
Score = 44.8 bits (101), Expect = 3e-04
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = +1
Query: 523 DVANLHCCLKAKSATCKELC--FHTFNKGSQEKWDMFDLQC 639
D A LHCC KA ++TC+ELC ++ + G+ + W FD C
Sbjct: 286 DGAKLHCCSKANTSTCRELCTKLYSMSWGNTQSWQEFDRFC 326
Score = 34.3 bits (75), Expect = 0.38
Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 12/100 (12%)
Frame = +3
Query: 111 MDKQQEAQWCCSQTQSVSCHEACQKVL--RRLGHSRIDGDAKEAAVDACEQSPELLHCLR 284
M ++ +CC + + +C AC+++L ++ +DG + Q P L C
Sbjct: 207 MRNPTDSLYCCDRAEDHACQNACKRILMSKKTEMEIVDGLIEGCKTQPLPQDP-LWQCFL 265
Query: 285 DLTSSTVVGDT----------SKYLPCCHESDSQSCRSTC 374
+ + S G T L CC ++++ +CR C
Sbjct: 266 ESSQSVHPGVTVHPPPSTGLDGAKLHCCSKANTSTCRELC 305
Score = 30.3 bits (65), Expect = 6.1
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 6/79 (7%)
Frame = +3
Query: 333 CC-HESDSQSCRSTCESVLRRTSD--IEEIVEALGQDCGAPAIHNVLWQCFLRKDAP--- 494
CC H D+Q CR CE + S+ ++ +++ C P +W C + P
Sbjct: 37 CCNHSKDNQMCRDVCEQIFSSKSESRLKHLLQRAPDYC--PETMVEIWNC-MNSSLPGVF 93
Query: 495 TDTKDLIP*GRCEFALLFE 551
+ + G CE A+ E
Sbjct: 94 KKSDGWVGLGCCELAIALE 112
>BC060806-1|AAH60806.1| 225|Homo sapiens RECK protein protein.
Length = 225
Score = 46.0 bits (104), Expect = 1e-04
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = +3
Query: 63 LTESCRRSDEIAMFDCMDKQQEAQWCCSQT-QSVSCHEACQKVLRRLGHSRIDGDAKEAA 239
+++ CR+ E A+F C+ + + CCS +C E CQ + R G ++ A
Sbjct: 126 ISKVCRKEYENALFSCISRNEMGSVCCSYAGHHTNCREYCQAIFRT---DSSPGPSQIKA 182
Query: 240 VD--ACEQSPELLHCLRDLTSS 299
V+ SP+L+HC+ + T S
Sbjct: 183 VENYCASISPQLIHCVNNYTQS 204
Score = 30.3 bits (65), Expect = 6.1
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 6/79 (7%)
Frame = +3
Query: 333 CC-HESDSQSCRSTCESVLRRTSD--IEEIVEALGQDCGAPAIHNVLWQCFLRKDAP--- 494
CC H D+Q CR CE + S+ ++ +++ C P +W C + P
Sbjct: 37 CCNHSKDNQMCRDVCEQIFSSKSESRLKHLLQRAPDYC--PETMVEIWNC-MNSSLPGVF 93
Query: 495 TDTKDLIP*GRCEFALLFE 551
+ + G CE A+ E
Sbjct: 94 KKSDGWVGLGCCELAIALE 112
>AK131285-1|BAD18459.1| 736|Homo sapiens protein ( Homo sapiens
cDNA FLJ16238 fis, clone HCASM2003018, weakly similar
to Homo sapiens nuclear transcription factor NFX2 (NFX2)
mRNA. ).
Length = 736
Score = 37.5 bits (83), Expect = 0.040
Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 4/90 (4%)
Frame = +3
Query: 105 DCMDKQQEAQWCCSQTQSVSCHEACQKVLRRLGHSRIDGDAKEAAVDAC----EQSPELL 272
+C+ K + + C SC C ++L H+ + K D C + PE L
Sbjct: 483 ECLGKHEVSPLPCHAVGPYSCKRVCGRILDCQNHTCMKECHKVTKTDGCTGKNKAGPECL 542
Query: 273 HCLRDLTSSTVVGDTSKYLPCCHESDSQSC 362
HC + S +G + CH + C
Sbjct: 543 HCEEGCSKSRPLGCLHPCILRCHPGECPPC 572
>BC037574-1|AAH37574.1| 366|Homo sapiens ubiquitin specific
peptidase 46 protein.
Length = 366
Score = 33.1 bits (72), Expect = 0.87
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 216 DGDAKEAAVDACEQSPELLHCLRDLTSSTVVGDTSKYL--PCCHESDSQ 356
D D + +VD EQ+ + HCLRD +++ + KY CC + ++Q
Sbjct: 192 DEDFLDLSVDV-EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 239
>AK024318-1|BAB14881.1| 366|Homo sapiens protein ( Homo sapiens
cDNA FLJ14256 fis, clone PLACE1000007, weakly similar to
PROBABLE UBIQUITIN CARBOXYL-TERMINAL HYDROLASE R10E11.3
(EC ).
Length = 366
Score = 33.1 bits (72), Expect = 0.87
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 216 DGDAKEAAVDACEQSPELLHCLRDLTSSTVVGDTSKYL--PCCHESDSQ 356
D D + +VD EQ+ + HCLRD +++ + KY CC + ++Q
Sbjct: 192 DEDFLDLSVDV-EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 239
>AK022614-1|BAB14133.1| 366|Homo sapiens protein ( Homo sapiens
cDNA FLJ12552 fis, clone NT2RM4000712, moderately
similar to Homo sapiens ubiquitin hydrolyzing enzyme I
(UBH1) mRNA. ).
Length = 366
Score = 33.1 bits (72), Expect = 0.87
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 216 DGDAKEAAVDACEQSPELLHCLRDLTSSTVVGDTSKYL--PCCHESDSQ 356
D D + +VD EQ+ + HCLRD +++ + KY CC + ++Q
Sbjct: 192 DEDFLDLSVDV-EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 239
>Y08418-1|CAA69695.1| 503|Homo sapiens nicotinic acetylcholine
receptor alpha3 subunit precursor protein.
Length = 503
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +1
Query: 424 WAKTV--ELPPYIMYCGNAF*GKMHRRTPRI*FPRDVANLHCCLKAKSATCKE 576
W KTV L P +M+ + + + PR + +++NL+C +A+S CKE
Sbjct: 339 WVKTVFLNLLPRVMFMTRPTSNEGNAQKPRPLYGAELSNLNCFSRAESKGCKE 391
>X53559-1|CAA37625.1| 474|Homo sapiens neuronal nicotinic
acetylcholine receptor alpha-3merase protein.
Length = 474
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +1
Query: 424 WAKTV--ELPPYIMYCGNAF*GKMHRRTPRI*FPRDVANLHCCLKAKSATCKE 576
W KTV L P +M+ + + + PR + +++NL+C +A+S CKE
Sbjct: 310 WVKTVFLNLLPRVMFMTRPTSNEGNAQKPRPLYGAELSNLNCFSRAESKGCKE 362
>U62432-1|AAB40110.1| 504|Homo sapiens nicotinic acetylcholine
receptor alpha3 subunit precursor protein.
Length = 504
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +1
Query: 424 WAKTV--ELPPYIMYCGNAF*GKMHRRTPRI*FPRDVANLHCCLKAKSATCKE 576
W KTV L P +M+ + + + PR + +++NL+C +A+S CKE
Sbjct: 340 WVKTVFLNLLPRVMFMTRPTSNEGNAQKPRPLYGAELSNLNCFSRAESKGCKE 392
>M86383-1|AAC84176.1| 502|Homo sapiens nicotinic acetylcholine
receptor alpha 3 subunit precursor protein.
Length = 502
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +1
Query: 424 WAKTV--ELPPYIMYCGNAF*GKMHRRTPRI*FPRDVANLHCCLKAKSATCKE 576
W KTV L P +M+ + + + PR + +++NL+C +A+S CKE
Sbjct: 338 WVKTVFLNLLPRVMFMTRPTSNEGNAQKPRPLYGAELSNLNCFSRAESKGCKE 390
>M37981-1|AAA59942.1| 503|Homo sapiens neuronal nicotinic
acetylcholine receptor protein.
Length = 503
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +1
Query: 424 WAKTV--ELPPYIMYCGNAF*GKMHRRTPRI*FPRDVANLHCCLKAKSATCKE 576
W KTV L P +M+ + + + PR + +++NL+C +A+S CKE
Sbjct: 339 WVKTVFLNLLPRVMFMTRPTSNEGNAQKPRPLYGAELSNLNCFSRAESKGCKE 391
>BT006897-1|AAP35543.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 3 protein.
Length = 505
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +1
Query: 424 WAKTV--ELPPYIMYCGNAF*GKMHRRTPRI*FPRDVANLHCCLKAKSATCKE 576
W KTV L P +M+ + + + PR + +++NL+C +A+S CKE
Sbjct: 341 WVKTVFLNLLPRVMFMTRPTSNEGNAQKPRPLYGAELSNLNCFSRAESKGCKE 393
>BT006646-1|AAP35292.1| 489|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 3 protein.
Length = 489
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +1
Query: 424 WAKTV--ELPPYIMYCGNAF*GKMHRRTPRI*FPRDVANLHCCLKAKSATCKE 576
W KTV L P +M+ + + + PR + +++NL+C +A+S CKE
Sbjct: 341 WVKTVFLNLLPRVMFMTRPTSNEGNAQKPRPLYGAELSNLNCFSRAESKGCKE 393
>BC098443-1|AAH98443.1| 504|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 504
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +1
Query: 424 WAKTV--ELPPYIMYCGNAF*GKMHRRTPRI*FPRDVANLHCCLKAKSATCKE 576
W KTV L P +M+ + + + PR + +++NL+C +A+S CKE
Sbjct: 340 WVKTVFLNLLPRVMFMTRPTSNEGNAQKPRPLYGAELSNLNCFSRAESKGCKE 392
>BC006114-1|AAH06114.1| 489|Homo sapiens CHRNA3 protein protein.
Length = 489
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +1
Query: 424 WAKTV--ELPPYIMYCGNAF*GKMHRRTPRI*FPRDVANLHCCLKAKSATCKE 576
W KTV L P +M+ + + + PR + +++NL+C +A+S CKE
Sbjct: 341 WVKTVFLNLLPRVMFMTRPTSNEGNAQKPRPLYGAELSNLNCFSRAESKGCKE 393
>BC002996-1|AAH02996.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 505
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +1
Query: 424 WAKTV--ELPPYIMYCGNAF*GKMHRRTPRI*FPRDVANLHCCLKAKSATCKE 576
W KTV L P +M+ + + + PR + +++NL+C +A+S CKE
Sbjct: 341 WVKTVFLNLLPRVMFMTRPTSNEGNAQKPRPLYGAELSNLNCFSRAESKGCKE 393
>BC001642-1|AAH01642.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 505
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +1
Query: 424 WAKTV--ELPPYIMYCGNAF*GKMHRRTPRI*FPRDVANLHCCLKAKSATCKE 576
W KTV L P +M+ + + + PR + +++NL+C +A+S CKE
Sbjct: 341 WVKTVFLNLLPRVMFMTRPTSNEGNAQKPRPLYGAELSNLNCFSRAESKGCKE 393
>BC000513-1|AAH00513.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 505
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +1
Query: 424 WAKTV--ELPPYIMYCGNAF*GKMHRRTPRI*FPRDVANLHCCLKAKSATCKE 576
W KTV L P +M+ + + + PR + +++NL+C +A+S CKE
Sbjct: 341 WVKTVFLNLLPRVMFMTRPTSNEGNAQKPRPLYGAELSNLNCFSRAESKGCKE 393
>AJ007783-1|CAA07682.1| 504|Homo sapiens nicotinic acetylcholine
receptor alpha-3 subunit protein.
Length = 504
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +1
Query: 424 WAKTV--ELPPYIMYCGNAF*GKMHRRTPRI*FPRDVANLHCCLKAKSATCKE 576
W KTV L P +M+ + + + PR + +++NL+C +A+S CKE
Sbjct: 340 WVKTVFLNLLPRVMFMTRPTSNEGNAQKPRPLYGAELSNLNCFSRAESKGCKE 392
>AF385584-1|AAK68110.1| 489|Homo sapiens nicotinic cholinergic
receptor alpha 3 protein.
Length = 489
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +1
Query: 424 WAKTV--ELPPYIMYCGNAF*GKMHRRTPRI*FPRDVANLHCCLKAKSATCKE 576
W KTV L P +M+ + + + PR + +++NL+C +A+S CKE
Sbjct: 335 WVKTVFLNLLPRVMFMTRPTSNEGNAQKPRPLYGAELSNLNCFSRAESKGCKE 387
>AK026410-1|BAB15475.1| 793|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22757 fis, clone KAIA0803. ).
Length = 793
Score = 31.1 bits (67), Expect = 3.5
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 318 SKYLPCCHESDSQSCRSTCESVLRRTSDIEEIVEALGQDCGAPAIHN 458
S+ L CCH D SC S ++LR D +++ E Q P++ N
Sbjct: 580 SQSLDCCHRGDLDSCFS-LPNILRWQPDDKKLPEPEPQPLSLPSLQN 625
>DQ462572-1|ABE73209.1| 205|Homo sapiens endothelial cell-specific
molecule-2 protein.
Length = 205
Score = 30.3 bits (65), Expect = 6.1
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = -1
Query: 210 ASVPASSTLSGTLRDTTQTASVNSTT 133
A VP+S GT RDT QT NSTT
Sbjct: 74 AGVPSSGRDGGTSRDTFQTVPPNSTT 99
>DQ112698-1|AAY99942.1| 318|Homo sapiens NADH dehydrogenase subunit
1 protein.
Length = 318
Score = 29.9 bits (64), Expect = 8.1
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1
Query: 37 ALVLWTRKPSPNPVVDL 87
AL+LWT P PNPVV+L
Sbjct: 82 ALLLWTPLPMPNPVVNL 98
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,003,018
Number of Sequences: 237096
Number of extensions: 2054814
Number of successful extensions: 8974
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 8671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8945
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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