Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5887
(645 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY052138-1|AAK93562.1| 1071|Drosophila melanogaster SD09502p pro... 98 8e-21
AE014296-2453|AAF49684.2| 1071|Drosophila melanogaster CG5392-PA... 98 8e-21
U09306-1|AAB60255.1| 1106|Drosophila melanogaster shuttle craft ... 33 0.33
AF145679-1|AAD38654.1| 1106|Drosophila melanogaster BcDNA.LD2272... 33 0.33
AE014134-2570|AAN10891.1| 1099|Drosophila melanogaster CG3647-PA... 33 0.33
AE014134-2569|AAF53441.2| 1106|Drosophila melanogaster CG3647-PB... 33 0.33
AF079764-1|AAC64271.1| 2023|Drosophila melanogaster enhancer of ... 30 3.1
AE013599-1314|AAM68743.1| 2023|Drosophila melanogaster CG7776-PB... 30 3.1
AE013599-1313|AAF58641.1| 2023|Drosophila melanogaster CG7776-PA... 30 3.1
BT023949-1|ABB36453.1| 1312|Drosophila melanogaster IP03879p pro... 29 4.1
AF287292-1|AAG00999.1| 729|Drosophila melanogaster Disco-relate... 29 4.1
AE014298-2334|AAF48566.2| 1311|Drosophila melanogaster CG32577-P... 29 4.1
AY118370-1|AAM48399.1| 359|Drosophila melanogaster RE12410p pro... 29 5.4
AE013599-2604|AAF57760.1| 359|Drosophila melanogaster CG10911-P... 29 5.4
BT021963-1|AAX94784.2| 840|Drosophila melanogaster LD05244p pro... 28 9.4
AJ556818-1|CAD89223.1| 2162|Drosophila melanogaster SMG1 protein... 28 9.4
AE014298-963|AAF46207.2| 3218|Drosophila melanogaster CG32743-PA... 28 9.4
AE014297-2332|AAF55402.1| 2112|Drosophila melanogaster CG4090-PA... 28 9.4
AE014296-808|AAF47871.2| 840|Drosophila melanogaster CG15011-PA... 28 9.4
>AY052138-1|AAK93562.1| 1071|Drosophila melanogaster SD09502p
protein.
Length = 1071
Score = 98.3 bits (234), Expect = 8e-21
Identities = 44/142 (30%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Frame = +3
Query: 69 ESCRRSDEIAMFDCMDKQQEAQWCCSQTQSVSCHEACQKVLRRLGHSRIDGDAKEAAVDA 248
++CRRSDE ++DC+++Q+ A CC Q ++ C EAC+ V + D A D
Sbjct: 201 QNCRRSDEQTLYDCLERQEAADQCCGQARTSECLEACRAVFEPANDNHDHVDINGACGD- 259
Query: 249 CEQSPELLHCLRDLTSSTVVGDTSKYLPCCHESDSQSCRSTCESVLRRTSDIEEIVEAL- 425
++ +++ C+ + T T + + +Y+PCC S + CR TC ++L + + + E E +
Sbjct: 260 --RNADVIQCVNNHTDMTPLANAEQYIPCCEYSSKEHCRHTCRNLLHQNATLMERSEVIF 317
Query: 426 ----GQDCGAPAIHNVLWQCFL 479
CG+P WQCFL
Sbjct: 318 GRLEAAGCGSPLPQLPFWQCFL 339
Score = 32.7 bits (71), Expect = 0.44
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +1
Query: 523 DVANLHCCLKAKSATCKELCFHTFNKGSQEKWDMFDLQCLD 645
D A CC +A S C+ LC F + F+ +C+D
Sbjct: 379 DAAKRQCCEQASSHKCRRLCNQIFTSNWWDARSSFENECMD 419
>AE014296-2453|AAF49684.2| 1071|Drosophila melanogaster CG5392-PA
protein.
Length = 1071
Score = 98.3 bits (234), Expect = 8e-21
Identities = 44/142 (30%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Frame = +3
Query: 69 ESCRRSDEIAMFDCMDKQQEAQWCCSQTQSVSCHEACQKVLRRLGHSRIDGDAKEAAVDA 248
++CRRSDE ++DC+++Q+ A CC Q ++ C EAC+ V + D A D
Sbjct: 201 QNCRRSDEQTLYDCLERQEAADQCCGQARTSECLEACRAVFEPANDNHDHVDINGACGD- 259
Query: 249 CEQSPELLHCLRDLTSSTVVGDTSKYLPCCHESDSQSCRSTCESVLRRTSDIEEIVEAL- 425
++ +++ C+ + T T + + +Y+PCC S + CR TC ++L + + + E E +
Sbjct: 260 --RNADVIQCVNNHTDMTPLANAEQYIPCCEYSSKEHCRHTCRNLLHQNATLMERSEVIF 317
Query: 426 ----GQDCGAPAIHNVLWQCFL 479
CG+P WQCFL
Sbjct: 318 GRLEAAGCGSPLPQLPFWQCFL 339
Score = 32.7 bits (71), Expect = 0.44
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +1
Query: 523 DVANLHCCLKAKSATCKELCFHTFNKGSQEKWDMFDLQCLD 645
D A CC +A S C+ LC F + F+ +C+D
Sbjct: 379 DAAKRQCCEQASSHKCRRLCNQIFTSNWWDARSSFENECMD 419
>U09306-1|AAB60255.1| 1106|Drosophila melanogaster shuttle craft
protein protein.
Length = 1106
Score = 33.1 bits (72), Expect = 0.33
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 4/82 (4%)
Frame = +3
Query: 141 CSQTQSVSCHEACQKVLRRLGHSRIDGDAKEAAVDAC-EQSPELLHCLRDLTSSTVVGDT 317
C+ + V C E C K+L G R + AC EQ + HC G
Sbjct: 509 CAMKEEVLCGEICDKLL-NCGEHRCQAECHSGKCAACSEQVVQQCHC----------GKQ 557
Query: 318 SKYLPCCHESDSQ---SCRSTC 374
+ +PC ES + SC+ +C
Sbjct: 558 ERKVPCTRESQDKRTYSCKDSC 579
>AF145679-1|AAD38654.1| 1106|Drosophila melanogaster BcDNA.LD22726
protein.
Length = 1106
Score = 33.1 bits (72), Expect = 0.33
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 4/82 (4%)
Frame = +3
Query: 141 CSQTQSVSCHEACQKVLRRLGHSRIDGDAKEAAVDAC-EQSPELLHCLRDLTSSTVVGDT 317
C+ + V C E C K+L G R + AC EQ + HC G
Sbjct: 509 CAMKEEVLCGEICDKLL-NCGEHRCQAECHSGKCAACSEQVVQQCHC----------GKQ 557
Query: 318 SKYLPCCHESDSQ---SCRSTC 374
+ +PC ES + SC+ +C
Sbjct: 558 ERKVPCTRESQDKRTYSCKDSC 579
>AE014134-2570|AAN10891.1| 1099|Drosophila melanogaster CG3647-PA,
isoform A protein.
Length = 1099
Score = 33.1 bits (72), Expect = 0.33
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 4/82 (4%)
Frame = +3
Query: 141 CSQTQSVSCHEACQKVLRRLGHSRIDGDAKEAAVDAC-EQSPELLHCLRDLTSSTVVGDT 317
C+ + V C E C K+L G R + AC EQ + HC G
Sbjct: 502 CAMKEEVLCGEICDKLL-NCGEHRCQAECHSGKCAACSEQVVQQCHC----------GKQ 550
Query: 318 SKYLPCCHESDSQ---SCRSTC 374
+ +PC ES + SC+ +C
Sbjct: 551 ERKVPCTRESQDKRTYSCKDSC 572
>AE014134-2569|AAF53441.2| 1106|Drosophila melanogaster CG3647-PB,
isoform B protein.
Length = 1106
Score = 33.1 bits (72), Expect = 0.33
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 4/82 (4%)
Frame = +3
Query: 141 CSQTQSVSCHEACQKVLRRLGHSRIDGDAKEAAVDAC-EQSPELLHCLRDLTSSTVVGDT 317
C+ + V C E C K+L G R + AC EQ + HC G
Sbjct: 509 CAMKEEVLCGEICDKLL-NCGEHRCQAECHSGKCAACSEQVVQQCHC----------GKQ 557
Query: 318 SKYLPCCHESDSQ---SCRSTC 374
+ +PC ES + SC+ +C
Sbjct: 558 ERKVPCTRESQDKRTYSCKDSC 579
>AF079764-1|AAC64271.1| 2023|Drosophila melanogaster enhancer of
polycomb protein.
Length = 2023
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 231 EAAVDACEQSPELLHCLRDLTSSTVVGDTSK 323
EAAVD E + +LL C+ + S DTSK
Sbjct: 1173 EAAVDEVEMADQLLDCIDEKKSKVGAADTSK 1203
>AE013599-1314|AAM68743.1| 2023|Drosophila melanogaster CG7776-PB,
isoform B protein.
Length = 2023
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 231 EAAVDACEQSPELLHCLRDLTSSTVVGDTSK 323
EAAVD E + +LL C+ + S DTSK
Sbjct: 1173 EAAVDEVEMADQLLDCIDEKKSKVGAADTSK 1203
>AE013599-1313|AAF58641.1| 2023|Drosophila melanogaster CG7776-PA,
isoform A protein.
Length = 2023
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 231 EAAVDACEQSPELLHCLRDLTSSTVVGDTSK 323
EAAVD E + +LL C+ + S DTSK
Sbjct: 1173 EAAVDEVEMADQLLDCIDEKKSKVGAADTSK 1203
>BT023949-1|ABB36453.1| 1312|Drosophila melanogaster IP03879p
protein.
Length = 1312
Score = 29.5 bits (63), Expect = 4.1
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 303 VVGDTSKYLPCCHESDSQSCRSTCESVLRRTSDIEEIVEALGQDCGAPAIHNVLWQC 473
VVGD +P HE+D+ + ES R TS + + + Q + + L +C
Sbjct: 673 VVGDEIDSMPLDHENDNDNENENDESDERSTSAVSSLSQTKEQSSPGKVVQSGLEEC 729
>AF287292-1|AAG00999.1| 729|Drosophila melanogaster Disco-related
protein protein.
Length = 729
Score = 29.5 bits (63), Expect = 4.1
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 303 VVGDTSKYLPCCHESDSQSCRSTCESVLRRTSDIEEIVEALGQDCGAPAIHNVLWQC 473
VVGD +P HE+D+ + ES R TS + + + Q + + L +C
Sbjct: 90 VVGDEIDSMPLDHENDNDNENENDESDERSTSAVSSLSQTKEQSSPGKVVQSGLEEC 146
>AE014298-2334|AAF48566.2| 1311|Drosophila melanogaster CG32577-PA
protein.
Length = 1311
Score = 29.5 bits (63), Expect = 4.1
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 303 VVGDTSKYLPCCHESDSQSCRSTCESVLRRTSDIEEIVEALGQDCGAPAIHNVLWQC 473
VVGD +P HE+D+ + ES R TS + + + Q + + L +C
Sbjct: 672 VVGDEIDSMPLDHENDNDNENENDESDERSTSAVSSLSQTKEQSSPGKVVQSGLEEC 728
>AY118370-1|AAM48399.1| 359|Drosophila melanogaster RE12410p
protein.
Length = 359
Score = 29.1 bits (62), Expect = 5.4
Identities = 38/129 (29%), Positives = 54/129 (41%)
Frame = -3
Query: 454 CMAGAPQSWPNASTISSMSLVRRNTDSQVLRQL*ESDSWQHGRYLDVSPTTVEDVKSLRQ 275
C+AGAP P+ ST + S +TDS +DS S T V +
Sbjct: 184 CIAGAP--IPSESTSTQASSTDSSTDSTSASTESSTDS---SSVSTESSTDSSSVSTESS 238
Query: 274 CSSSGDCSQASTAASFASPSMRECPSLLNTFWHAS*HDTDCVCEQHH*ASCCLSMQSNMA 95
SS D S AST +S S S+ S ++ +S T+ + +S S +S+
Sbjct: 239 TDSSTDSSSASTESSTDSSSV-STESSTDSSTDSSSVSTESSTDSSTDSSSA-STESSTE 296
Query: 94 ISSDRRQDS 68
SSD DS
Sbjct: 297 SSSDSPSDS 305
>AE013599-2604|AAF57760.1| 359|Drosophila melanogaster CG10911-PA
protein.
Length = 359
Score = 29.1 bits (62), Expect = 5.4
Identities = 38/129 (29%), Positives = 54/129 (41%)
Frame = -3
Query: 454 CMAGAPQSWPNASTISSMSLVRRNTDSQVLRQL*ESDSWQHGRYLDVSPTTVEDVKSLRQ 275
C+AGAP P+ ST + S +TDS +DS S T V +
Sbjct: 184 CIAGAP--IPSESTSTQASSTDSSTDSTSASTESSTDS---SSVSTESSTDSSSVSTESS 238
Query: 274 CSSSGDCSQASTAASFASPSMRECPSLLNTFWHAS*HDTDCVCEQHH*ASCCLSMQSNMA 95
SS D S AST +S S S+ S ++ +S T+ + +S S +S+
Sbjct: 239 TDSSTDSSSASTESSTDSSSV-STESSTDSSTDSSSVSTESSTDSSTDSSSA-STESSTE 296
Query: 94 ISSDRRQDS 68
SSD DS
Sbjct: 297 SSSDSPSDS 305
>BT021963-1|AAX94784.2| 840|Drosophila melanogaster LD05244p
protein.
Length = 840
Score = 28.3 bits (60), Expect = 9.4
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = +3
Query: 81 RSDEIAMFDCMDKQQEAQWCCSQTQSVSCHEACQKVLRRLGH 206
R +E + C+ + A W C ++ SC +C + L+ H
Sbjct: 557 RCEEGVIVTCIGGHEVATWPCWNSKPTSCQRSCARQLKCGNH 598
>AJ556818-1|CAD89223.1| 2162|Drosophila melanogaster SMG1 protein
protein.
Length = 2162
Score = 28.3 bits (60), Expect = 9.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 200 GTLAHRWRREGSSS*CLRTITRATALPQRLDV 295
G +RW ++ + S C+ T ATA+ Q LD+
Sbjct: 1462 GNWCYRWGKKVADSCCVLTQADATAISQALDI 1493
>AE014298-963|AAF46207.2| 3218|Drosophila melanogaster CG32743-PA
protein.
Length = 3218
Score = 28.3 bits (60), Expect = 9.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 200 GTLAHRWRREGSSS*CLRTITRATALPQRLDV 295
G +RW ++ + S C+ T ATA+ Q LD+
Sbjct: 1462 GNWCYRWGKKVADSCCVLTQADATAISQALDI 1493
>AE014297-2332|AAF55402.1| 2112|Drosophila melanogaster CG4090-PA
protein.
Length = 2112
Score = 28.3 bits (60), Expect = 9.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 201 PASSTLSGTLRDTTQTASVNSTTEPP 124
P ++TLS +T T S STT+PP
Sbjct: 1437 PTTTTLSSETETSTVTTSPESTTQPP 1462
>AE014296-808|AAF47871.2| 840|Drosophila melanogaster CG15011-PA
protein.
Length = 840
Score = 28.3 bits (60), Expect = 9.4
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = +3
Query: 81 RSDEIAMFDCMDKQQEAQWCCSQTQSVSCHEACQKVLRRLGH 206
R +E + C+ + A W C ++ SC +C + L+ H
Sbjct: 557 RCEEGVIVTCIGGHEVATWPCWNSKPTSCQRSCARQLKCGNH 598
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,795,065
Number of Sequences: 53049
Number of extensions: 668621
Number of successful extensions: 3456
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3450
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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