Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5886
         (747 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK000104-1|BAA90948.1|  413|Homo sapiens protein ( Homo sapiens ...    32   2.5  
AC002379-2|AAS02013.1|  413|Homo sapiens unknown protein.              32   2.5  
U72849-1|AAD00186.1| 2033|Homo sapiens envoplakin protein.             30   7.7  
U53786-1|AAC64662.1| 2033|Homo sapiens envoplakin protein.             30   7.7  
BC126105-1|AAI26106.1| 2033|Homo sapiens envoplakin protein.           30   7.7  
BC126103-1|AAI26104.1| 2033|Homo sapiens envoplakin protein.           30   7.7  

>AK000104-1|BAA90948.1|  413|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20097 fis, clone COL04387. ).
          Length = 413

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 18/55 (32%), Positives = 31/55 (56%)
 Frame = +2

Query: 164 AVSSSTHQSYKKKKSYHVSPIRQVEIAKTSI*LGELTPLFSLCCLGPTTICLHIH 328
           +VS  T +S +KK  Y ++ +    +  T++ +  L    SLCCLG +T+  H+H
Sbjct: 314 SVSRETLKS-RKKSDYSLNKVNAPILTNTTLNVIRLVDGVSLCCLGWSTVA-HLH 366


>AC002379-2|AAS02013.1|  413|Homo sapiens unknown protein.
          Length = 413

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 18/55 (32%), Positives = 31/55 (56%)
 Frame = +2

Query: 164 AVSSSTHQSYKKKKSYHVSPIRQVEIAKTSI*LGELTPLFSLCCLGPTTICLHIH 328
           +VS  T +S +KK  Y ++ +    +  T++ +  L    SLCCLG +T+  H+H
Sbjct: 314 SVSRETLKS-RKKSDYSLNKVNAPILTNTTLNVIRLVDGVSLCCLGWSTVA-HLH 366


>U72849-1|AAD00186.1| 2033|Homo sapiens envoplakin protein.
          Length = 2033

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +1

Query: 469  RSRAIQLQRRNPQQGYTQEEILVLAQAEPDLREHGDRL 582
            +S+ + L+RR P++    +E+ V+ Q +P LRE   RL
Sbjct: 1355 QSKRLLLERRKPEEKVVVQEV-VVTQKDPKLREEHSRL 1391


>U53786-1|AAC64662.1| 2033|Homo sapiens envoplakin protein.
          Length = 2033

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +1

Query: 469  RSRAIQLQRRNPQQGYTQEEILVLAQAEPDLREHGDRL 582
            +S+ + L+RR P++    +E+ V+ Q +P LRE   RL
Sbjct: 1355 QSKRLLLERRKPEEKVVVQEV-VVTQKDPKLREEHSRL 1391


>BC126105-1|AAI26106.1| 2033|Homo sapiens envoplakin protein.
          Length = 2033

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +1

Query: 469  RSRAIQLQRRNPQQGYTQEEILVLAQAEPDLREHGDRL 582
            +S+ + L+RR P++    +E+ V+ Q +P LRE   RL
Sbjct: 1355 QSKRLLLERRKPEEKVVVQEV-VVTQKDPKLREEHSRL 1391


>BC126103-1|AAI26104.1| 2033|Homo sapiens envoplakin protein.
          Length = 2033

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +1

Query: 469  RSRAIQLQRRNPQQGYTQEEILVLAQAEPDLREHGDRL 582
            +S+ + L+RR P++    +E+ V+ Q +P LRE   RL
Sbjct: 1355 QSKRLLLERRKPEEKVVVQEV-VVTQKDPKLREEHSRL 1391


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,892,265
Number of Sequences: 237096
Number of extensions: 2050066
Number of successful extensions: 4579
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4577
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)