Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5880
(660 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3B8.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.78
SPCC290.04 |ams2|SPCC4F11.01|cell cycle regulated GATA-type tran... 28 1.0
SPBC16E9.14c |||membrane transporter|Schizosaccharomyces pombe|c... 28 1.4
SPCC4G3.03 |||WD repeat protein|Schizosaccharomyces pombe|chr 3|... 28 1.4
SPCC191.11 |inv1||beta-fructofuranosidase|Schizosaccharomyces po... 27 2.4
SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter Trk2|Sch... 27 2.4
SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase |Schizosa... 27 2.4
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 27 3.2
SPBC3B8.02 |php5||CCAAT-binding factor complex subunit Php5|Schi... 26 4.2
SPBP8B7.17c |||phosphomethylpyrimidine kinase|Schizosaccharomyce... 26 5.5
SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5 |Sc... 26 5.5
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 25 7.3
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 25 9.7
SPCC1682.03c |mug174||meiotically upregulated gene Mug174|Schizo... 25 9.7
SPBP22H7.06 |||nicotinamide riboside kinase |Schizosaccharomyces... 25 9.7
>SPBC3B8.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 511
Score = 28.7 bits (61), Expect = 0.78
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -1
Query: 333 HISPTADNPVLLIIDNHSNHISLHCRQH 250
H++ T DNP+ + +N++NH++ H
Sbjct: 5 HMNSTGDNPIEIDFENYANHMNKFLMAH 32
>SPCC290.04 |ams2|SPCC4F11.01|cell cycle regulated GATA-type
transcription factor Ams2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 697
Score = 28.3 bits (60), Expect = 1.0
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = -1
Query: 171 KSQYAIEADEWKTQHPGRSISNIDFQQSLYKYCHCR*RSFSFQGHGNMYIY 19
KSQ+A+ K P + I +D Q + C C S + G+ +Y
Sbjct: 31 KSQHAVPIQVLKEVEPKKVICQVDIQHVIQTVCRCS-PELSCKSQGDFSVY 80
>SPBC16E9.14c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 386
Score = 27.9 bits (59), Expect = 1.4
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -1
Query: 324 PTADNPVLLIIDNHSNHISLHCRQHNMI-VLTLPPHSSHKLQ 202
P+A+NP LL +D H H +H++ LPP + L+
Sbjct: 32 PSANNPNLLSVDTRPTHRKGHHHKHSLSHQYFLPPKNRQPLE 73
>SPCC4G3.03 |||WD repeat protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 347
Score = 27.9 bits (59), Expect = 1.4
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = -1
Query: 336 DHISPTADNPVLLIIDNHSNHISLHCRQHNMIVLTLPPHSSHKLQPLD 193
D+ SPT+ + + D H+N I +H R + L + H ++ +D
Sbjct: 98 DYWSPTSKQTHMKLCDQHNNGIEIHRRNCDSHAEALISSNDHTIKVVD 145
>SPCC191.11 |inv1||beta-fructofuranosidase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 581
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -3
Query: 475 AACIYFSSKKDEE*TN-GWSSNWQY 404
A+ +Y SS + + GW+SNWQY
Sbjct: 344 ASALYHSSSANADVIGVGWASNWQY 368
>SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter
Trk2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 880
Score = 27.1 bits (57), Expect = 2.4
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 505 NSGYSLTTFSRNNFINFFFPFGDITL*VFFGTETMPV 615
N GYSL + S N+F FP T+ +F G P+
Sbjct: 545 NLGYSLNSDSLNSFQKAIFPQVLGTILIFLGNTFFPI 581
>SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 440
Score = 27.1 bits (57), Expect = 2.4
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 9/49 (18%)
Frame = +1
Query: 133 CLPFISFNCV---------LAFKRTVNTPIQGL*FVTAVRWQSKYYHVM 252
C+P SFN + LAF+ + PI+ F +RW S+ YH +
Sbjct: 146 CIPVPSFNVLNGGRHAGGDLAFQEFMIMPIKAPTFSEGLRWGSEVYHTL 194
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 26.6 bits (56), Expect = 3.2
Identities = 12/45 (26%), Positives = 19/45 (42%)
Frame = -1
Query: 342 FKDHISPTADNPVLLIIDNHSNHISLHCRQHNMIVLTLPPHSSHK 208
FK H + + N D+ N++ H + + LPP HK
Sbjct: 486 FKGHANAQSQNRAYF--DDDGNYVICGSEDHQVFIWDLPPQHMHK 528
>SPBC3B8.02 |php5||CCAAT-binding factor complex subunit
Php5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 415
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -1
Query: 201 PLDRGVYSPLKSQYAIEADEWKTQHPGRSISNIDFQQSLYK 79
P+ G P +Q + + + HP R D QS+YK
Sbjct: 231 PMPTGSQLPFSNQQSSQPSMQYSSHPSRMQQMQDIDQSMYK 271
>SPBP8B7.17c |||phosphomethylpyrimidine kinase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 506
Score = 25.8 bits (54), Expect = 5.5
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -1
Query: 363 YLQWLHHFKDHISPTADNPVLLIIDNHSNHISLHCRQHNMIVL 235
Y+ W+ H KD + + +L ++ +S ISL QH + +L
Sbjct: 442 YVAWVEHCKDKSATSHIETLLESLETNSQIISLSKVQHLLGIL 484
>SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 632
Score = 25.8 bits (54), Expect = 5.5
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Frame = +1
Query: 13 EGIYIHIPVTLKAEAT---LPTVAIFIKALLKIDIT 111
E +Y H P A+A+ +PTV ++ L+K+DIT
Sbjct: 226 ETVYAHEPSDSLAKASKQQIPTVQNDLRILIKLDIT 261
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 25.4 bits (53), Expect = 7.3
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = -3
Query: 538 FWRTWSNYNHCLLCQYDWKLCAACIYFSSKKDEE*TNGWSSNWQYWYDI 392
+W W N+ + DW++ + KD + N ++N Y YDI
Sbjct: 45 YWGKWENHQYHPSPD-DWQVPFYTVILDKWKDGDPRNNEANNTIYEYDI 92
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 25.0 bits (52), Expect = 9.7
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 290 SIISSTGLSAVGEIWSLK 343
S++SS G A+G IW L+
Sbjct: 320 SLVSSGGNDAIGRIWDLR 337
>SPCC1682.03c |mug174||meiotically upregulated gene
Mug174|Schizosaccharomyces pombe|chr 3|||Manual
Length = 626
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/40 (25%), Positives = 20/40 (50%)
Frame = -1
Query: 183 YSPLKSQYAIEADEWKTQHPGRSISNIDFQQSLYKYCHCR 64
Y+ + YA+ + K + +I +FQQ+ Y+ H +
Sbjct: 186 YANMPENYALNTKKSKISNENDTIFKANFQQNKYESLHAK 225
>SPBP22H7.06 |||nicotinamide riboside kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 230
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/23 (43%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = -1
Query: 384 EFINADLYLQWLHHFKDH-ISPT 319
E +N D +L+ LH+ +DH + PT
Sbjct: 60 ESLNLDAFLENLHYIRDHGVLPT 82
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,944,235
Number of Sequences: 5004
Number of extensions: 65550
Number of successful extensions: 178
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 178
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 299817502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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