Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5880
         (660 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L00632-1|AAA28415.1|  444|Drosophila melanogaster protein ( Dros...    29   5.6  
BT009992-1|AAQ22461.1|  449|Drosophila melanogaster RE37385p pro...    29   5.6  
AE013599-3852|AAF47194.1|  449|Drosophila melanogaster CG4354-PA...    29   5.6  
BT001328-1|AAN71083.1|  513|Drosophila melanogaster AT17665p pro...    29   7.4  
AY113217-1|AAM29222.1|  542|Drosophila melanogaster AT07424p pro...    29   7.4  
AE013599-2861|AAF57576.1|  513|Drosophila melanogaster CG9975-PA...    29   7.4  

>L00632-1|AAA28415.1|  444|Drosophila melanogaster protein (
           Drosophila melanogasterC/EBP gene, complete cds. ).
          Length = 444

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 20/75 (26%), Positives = 30/75 (40%)
 Frame = -1

Query: 411 GSIGMTSDSEFINADLYLQWLHHFKDHISPTADNPVLLIIDNHSNHISLHCRQHNMIVLT 232
           GS G ++ S+F N        HH   H++  A    LL       H  LH +Q +     
Sbjct: 288 GSTGSSNGSQFTNLTTANVLAHHNLPHLAAAAGAHNLL-----KQHSKLHAQQQHQQHQQ 342

Query: 231 LPPHSSHKLQPLDRG 187
              H  H  + +D+G
Sbjct: 343 QQQHRKHSNKHVDKG 357


>BT009992-1|AAQ22461.1|  449|Drosophila melanogaster RE37385p
           protein.
          Length = 449

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 20/75 (26%), Positives = 30/75 (40%)
 Frame = -1

Query: 411 GSIGMTSDSEFINADLYLQWLHHFKDHISPTADNPVLLIIDNHSNHISLHCRQHNMIVLT 232
           GS G ++ S+F N        HH   H++  A    LL       H  LH +Q +     
Sbjct: 293 GSTGSSNGSQFTNLTTANVLAHHNLPHLAAAAGAHNLL-----KQHSKLHAQQQHQQHQQ 347

Query: 231 LPPHSSHKLQPLDRG 187
              H  H  + +D+G
Sbjct: 348 QQQHRKHSNKHVDKG 362


>AE013599-3852|AAF47194.1|  449|Drosophila melanogaster CG4354-PA
           protein.
          Length = 449

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 20/75 (26%), Positives = 30/75 (40%)
 Frame = -1

Query: 411 GSIGMTSDSEFINADLYLQWLHHFKDHISPTADNPVLLIIDNHSNHISLHCRQHNMIVLT 232
           GS G ++ S+F N        HH   H++  A    LL       H  LH +Q +     
Sbjct: 293 GSTGSSNGSQFTNLTTANVLAHHNLPHLAAAAGAHNLL-----KQHSKLHAQQQHQQHQQ 347

Query: 231 LPPHSSHKLQPLDRG 187
              H  H  + +D+G
Sbjct: 348 QQQHRKHSNKHVDKG 362


>BT001328-1|AAN71083.1|  513|Drosophila melanogaster AT17665p
           protein.
          Length = 513

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +1

Query: 436 TLHLFSRKNKCRRHIISSRTDTANSGYSLTTFSRNNFI 549
           T HLF R+N+ R H   S     N+G+S   F+ NN +
Sbjct: 474 TSHLFVRRNEKRMHFDGSCFIVRNAGHS-AGFNENNLL 510


>AY113217-1|AAM29222.1|  542|Drosophila melanogaster AT07424p
           protein.
          Length = 542

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = -2

Query: 656 KYNFPSGRIYNMDE--TGIVSVPKKTHKVISPKGKKKLIKLFLENVVKL 516
           K   P+G++   DE  + + S PKKT KVI+ +     ++  +E  V+L
Sbjct: 464 KVEEPNGKVQEQDELESNLDSRPKKTRKVITRRAPDPPVRCDVEPKVRL 512


>AE013599-2861|AAF57576.1|  513|Drosophila melanogaster CG9975-PA
           protein.
          Length = 513

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +1

Query: 436 TLHLFSRKNKCRRHIISSRTDTANSGYSLTTFSRNNFI 549
           T HLF R+N+ R H   S     N+G+S   F+ NN +
Sbjct: 474 TSHLFVRRNEKRMHFDGSCFIVRNAGHS-AGFNENNLL 510


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,210,138
Number of Sequences: 53049
Number of extensions: 655915
Number of successful extensions: 1622
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1622
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)