Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5880
(660 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 27 0.12
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 27 0.12
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 26 0.28
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 26 0.28
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 26 0.28
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 26 0.37
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 24 1.5
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 23 2.0
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 22 4.5
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 21 7.9
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 27.5 bits (58), Expect = 0.12
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = -1
Query: 363 YLQWLHHFKDHISPTADNPVLLIIDNHSNHISLHCRQ 253
Y+Q +H IS D + ++D++ NH+ L+ +Q
Sbjct: 322 YVQMIHDLHTRISTAID--LGYVVDSYGNHVKLYTKQ 356
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 27.5 bits (58), Expect = 0.12
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = -1
Query: 363 YLQWLHHFKDHISPTADNPVLLIIDNHSNHISLHCRQ 253
Y+Q +H IS D + ++D++ NH+ L+ +Q
Sbjct: 322 YVQMIHDLHTRISTAID--LGYVVDSYGNHVKLYTKQ 356
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 26.2 bits (55), Expect = 0.28
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = -1
Query: 243 IVLTLPPHSSHKLQPLDRGVYSPLKSQYAIEADE----WKTQHPGRSISNI 103
I LTL + KL PLDR V S + Y D+ WK P + + N+
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFLWKEGDPVQVVKNL 204
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 26.2 bits (55), Expect = 0.28
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = -1
Query: 243 IVLTLPPHSSHKLQPLDRGVYSPLKSQYAIEADE----WKTQHPGRSISNI 103
I LTL + KL PLDR V S + Y D+ WK P + + N+
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFLWKEGDPVQVVKNL 204
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 26.2 bits (55), Expect = 0.28
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +1
Query: 445 LFSRKNKCRRHIISSRTDTANSGYSLTTFSRNNF 546
L S + K ++ I++ RTD ++S S+++ N+F
Sbjct: 353 LSSSEEKLKQDILNLRTDISSSSSSISSSEENDF 386
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 25.8 bits (54), Expect = 0.37
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -2
Query: 413 LAVLV*HLIRNSSTRIYICNGFIISRTIFHQL 318
L VLV +L +S ++ +C+ ++S T+F L
Sbjct: 266 LTVLVFYLPSDSGEKVSLCSSILLSLTVFFLL 297
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 350 SHCKYKSALMNSESDVIPILPV 415
S C S+L ESDV+ + PV
Sbjct: 424 SDCSTTSSLSGDESDVVELQPV 445
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 23.4 bits (48), Expect = 2.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 93 VENRYYL*IYQDAVSSIHQLQLRT 164
V+N+ L IYQ+A S H+L T
Sbjct: 205 VDNKNTLIIYQNADDSFHRLSSHT 228
Score = 21.8 bits (44), Expect = 6.0
Identities = 16/63 (25%), Positives = 27/63 (42%)
Frame = -1
Query: 432 LMDGAPTGSIGMTSDSEFINADLYLQWLHHFKDHISPTADNPVLLIIDNHSNHISLHCRQ 253
++D T I +D F + L+H D +S +N L +DN ++L
Sbjct: 204 MVDNKNTLIIYQNADDSFHRLSSHT--LNHNSDKMSDQQENLTLKEVDNKVYGMALSPVT 261
Query: 252 HNM 244
HN+
Sbjct: 262 HNL 264
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +1
Query: 106 ITYRSTRMLCLPFISFNCVLAFKRT 180
I + S +LC+PF ++ V + T
Sbjct: 140 IVFNSGTILCVPFTTYTPVCEYDHT 164
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 7.9
Identities = 12/44 (27%), Positives = 19/44 (43%)
Frame = -1
Query: 609 HRLRSKKDS*SYITERKKKVNKIVSGERGQTITTVCCVSTTGNY 478
+R RSK+ S + K KI+S I+ + + NY
Sbjct: 59 YRERSKERSRDKRERERSKERKIISSLSNNYISNISNYNNNNNY 102
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,703
Number of Sequences: 438
Number of extensions: 4637
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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