Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5877
(762 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical pr... 36 0.031
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 35 0.055
L15313-8|AAA28196.1| 469|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical pr... 30 1.6
U53151-2|AAN73859.1| 385|Caenorhabditis elegans Serpentine rece... 30 2.1
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 29 2.7
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 29 2.7
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z83241-5|CAH10791.1| 1183|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z83241-4|CAB05819.3| 1181|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z81120-11|CAH10815.1| 1183|Caenorhabditis elegans Hypothetical p... 28 6.3
Z81120-10|CAB03350.3| 1181|Caenorhabditis elegans Hypothetical p... 28 6.3
U41036-5|AAV28332.1| 475|Caenorhabditis elegans Hypothetical pr... 28 6.3
AC087081-8|AAY55899.1| 499|Caenorhabditis elegans Hypothetical ... 28 6.3
U41270-1|AAA82439.2| 411|Caenorhabditis elegans Hypothetical pr... 28 8.3
>U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical
protein F35A5.5 protein.
Length = 125
Score = 35.9 bits (79), Expect = 0.031
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 165 IGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPI 269
I +P P PV VPQ V VP+P P P+ + + P+
Sbjct: 7 IPIPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPV 41
Score = 35.1 bits (77), Expect = 0.055
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 138 PYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVE 260
P + + P+P PV V +P + +P+P P PV V V+
Sbjct: 6 PIPIPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPVPVPVQ 46
Score = 34.7 bits (76), Expect = 0.073
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 165 IGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPI 269
I +PIP PV V P VP+P P P+ + + P+
Sbjct: 5 IPIPIPAPVPVPAPVPQPVPVPMPMPMPMPMPMPV 39
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 171 VPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPI 269
VP+P PV VP + +P+P P P+ V V P+
Sbjct: 13 VPVPAPVPQPVPVPMPMPMPMPMPMPVPVPVPV 45
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 138 PYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTV 257
P + + + VP P P V VP + +P+P P PV V V
Sbjct: 4 PIPIPIPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPVPV 43
Score = 32.3 bits (70), Expect = 0.39
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 171 VPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPI 269
+P P P+ + P V P+PQP PV + + P+
Sbjct: 1 MPPPIPIPIPAPVPVPAPVPQPVPVPMPMPMPM 33
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 35.1 bits (77), Expect = 0.055
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +3
Query: 171 VPIPHPVAVSVPQYVKVPIPQPYPVH 248
VP+P PV V VP V VP+P P PV+
Sbjct: 156 VPVPVPVQVPVPIRVPVPVPVPTPVY 181
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +3
Query: 120 HTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTV 257
H P V V ++ VP+P P V P Y VP P P P V
Sbjct: 155 HVPVPVPVQVPVPIRVPVPVPVPTPVYQPTYCAVP-PCPAPAATPV 199
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +3
Query: 174 PIPHPVAVS-VPQYVKVPIPQ--PYPVHVTVEQPI 269
P P PVA V Q+V VP+P P P+ V V P+
Sbjct: 142 PCPAPVAPQPVIQHVPVPVPVQVPVPIRVPVPVPV 176
>L15313-8|AAA28196.1| 469|Caenorhabditis elegans Hypothetical
protein ZK353.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +3
Query: 162 KIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVE 260
++ P P P V VP PIP P PV ++
Sbjct: 125 QLSTPSPSPAPVQVPASTDAPIPAPTPVTAPIQ 157
>Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical
protein B0393.4 protein.
Length = 803
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 147 VTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPV 245
V V + P+P PV VP+ PI +P PV
Sbjct: 108 VAVTLPVPEPVPEPVPEPVPESTPEPISEPLPV 140
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 165 IGVPIPHPVAVSVPQYVKVPIPQPY--PVHVTVEQP 266
+ +P+P PV VP+ V P+P P+ V E+P
Sbjct: 110 VTLPVPEPVPEPVPEPVPESTPEPISEPLPVVQEEP 145
>U53151-2|AAN73859.1| 385|Caenorhabditis elegans Serpentine
receptor, class r protein10 protein.
Length = 385
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 187 GWGIGTPIFFTTVTWYGFVCSVCVW 113
GWG G FF +GFVCS+CV+
Sbjct: 72 GWGEGN--FFGYSALFGFVCSLCVF 94
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 174 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 266
P P P V P+ V + P P PV + VE+P
Sbjct: 1639 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEP 1669
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 174 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 266
P P P V P+ V + P P PV + VE+P
Sbjct: 1639 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEP 1669
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical
protein R11A8.7d protein.
Length = 1427
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 174 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 266
P P P V P+ V + P P PV + VE+P
Sbjct: 460 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEP 490
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical
protein R11A8.7c protein.
Length = 1405
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 174 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 266
P P P V P+ V + P P PV + VE+P
Sbjct: 460 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEP 490
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 174 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 266
P P P V P+ V + P P PV + VE+P
Sbjct: 1639 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEP 1669
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 174 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 266
P P P V P+ V + P P PV + VE+P
Sbjct: 1639 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEP 1669
>Z83241-5|CAH10791.1| 1183|Caenorhabditis elegans Hypothetical
protein T12D8.9b protein.
Length = 1183
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 96 EWEPEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIP 230
E EPE + E K ++ KK+ P P P P V VP+P
Sbjct: 749 EQEPESESEPEPAKKTKRSL-KKVKEPEPEPEEYEQPTPVPVPVP 792
>Z83241-4|CAB05819.3| 1181|Caenorhabditis elegans Hypothetical
protein T12D8.9a protein.
Length = 1181
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 96 EWEPEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIP 230
E EPE + E K ++ KK+ P P P P V VP+P
Sbjct: 747 EQEPESESEPEPAKKTKRSL-KKVKEPEPEPEEYEQPTPVPVPVP 790
>Z81120-11|CAH10815.1| 1183|Caenorhabditis elegans Hypothetical
protein T12D8.9b protein.
Length = 1183
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 96 EWEPEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIP 230
E EPE + E K ++ KK+ P P P P V VP+P
Sbjct: 749 EQEPESESEPEPAKKTKRSL-KKVKEPEPEPEEYEQPTPVPVPVP 792
>Z81120-10|CAB03350.3| 1181|Caenorhabditis elegans Hypothetical
protein T12D8.9a protein.
Length = 1181
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 96 EWEPEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIP 230
E EPE + E K ++ KK+ P P P P V VP+P
Sbjct: 747 EQEPESESEPEPAKKTKRSL-KKVKEPEPEPEEYEQPTPVPVPVP 790
>U41036-5|AAV28332.1| 475|Caenorhabditis elegans Hypothetical
protein T14E8.4 protein.
Length = 475
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/51 (23%), Positives = 23/51 (45%)
Frame = +3
Query: 87 PSEEWEPEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPY 239
P+ +++P T + +V + G P+ P + P+ V +P PY
Sbjct: 241 PNSKFKPRPTTSQSNGPVIKTVIVDERGAPMNQPTSTQKPKVVHKFLPNPY 291
>AC087081-8|AAY55899.1| 499|Caenorhabditis elegans Hypothetical
protein Y82E9BL.18 protein.
Length = 499
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 296 VDNLINRYMDRLLHCDVDRVGLRYGHLHVLRDR 198
VD L+ R + R VDR G+R HL++ +R
Sbjct: 22 VDRLVLRKVSRRFRIQVDRHGIRPRHLYICLNR 54
>U41270-1|AAA82439.2| 411|Caenorhabditis elegans Hypothetical
protein AH9.1 protein.
Length = 411
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2
Query: 569 VSSKKSNKFEIRNYLRNTGIQNRDFFVLVLVARTAICKYKIVLILYKLN 715
V+ +NK I +RN ++ F L+ R IC++ VL+L LN
Sbjct: 204 VTDALTNK-TIYTIVRNEDVEALQVFKFYLIVRECICRWGPVLLLVILN 251
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,063,957
Number of Sequences: 27780
Number of extensions: 369060
Number of successful extensions: 1338
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1290
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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