Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5876
         (824 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029031-1|ABJ16964.1|  184|Drosophila melanogaster IP02265p pro...    48   2e-05
AY047580-1|AAK77312.1|  184|Drosophila melanogaster GH09112p pro...    48   2e-05
AE013599-3027|AAF57459.1|  184|Drosophila melanogaster CG18066-P...    48   2e-05

>BT029031-1|ABJ16964.1|  184|Drosophila melanogaster IP02265p
           protein.
          Length = 184

 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
 Frame = +3

Query: 3   HFQLYSKIAEEHAQHPHPYETSV---PRQSAAVAEATLKHSELFRVIAEQHARI 155
           HF  Y++IA+EHA H  P + ++   P  SAAVA AT KH   F  IA +HA I
Sbjct: 105 HFAAYNRIAQEHANHT-PGQVALANAPHASAAVAHATQKHLSAFERIAAEHAAI 157


>AY047580-1|AAK77312.1|  184|Drosophila melanogaster GH09112p
           protein.
          Length = 184

 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
 Frame = +3

Query: 3   HFQLYSKIAEEHAQHPHPYETSV---PRQSAAVAEATLKHSELFRVIAEQHARI 155
           HF  Y++IA+EHA H  P + ++   P  SAAVA AT KH   F  IA +HA I
Sbjct: 105 HFAAYNRIAQEHANHT-PGQVALANAPHASAAVAHATQKHLSAFERIAAEHAAI 157


>AE013599-3027|AAF57459.1|  184|Drosophila melanogaster CG18066-PA
           protein.
          Length = 184

 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
 Frame = +3

Query: 3   HFQLYSKIAEEHAQHPHPYETSV---PRQSAAVAEATLKHSELFRVIAEQHARI 155
           HF  Y++IA+EHA H  P + ++   P  SAAVA AT KH   F  IA +HA I
Sbjct: 105 HFAAYNRIAQEHANHT-PGQVALANAPHASAAVAHATQKHLSAFERIAAEHAAI 157


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,279,651
Number of Sequences: 53049
Number of extensions: 514444
Number of successful extensions: 1214
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1199
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3901127880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)