Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5870
         (701 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domai...    32   2.3  
AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domai...    32   2.3  
AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein pr...    32   2.3  
AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein.                32   2.3  

>AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domains
           6 protein.
          Length = 1229

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -1

Query: 476 SYLCFLETGFVTPRCLQRCP 417
           S LC  E G+V PRC Q+CP
Sbjct: 781 SGLCLCEAGYVGPRCEQQCP 800


>AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domains
           6 protein.
          Length = 1229

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -1

Query: 476 SYLCFLETGFVTPRCLQRCP 417
           S LC  E G+V PRC Q+CP
Sbjct: 781 SGLCLCEAGYVGPRCEQQCP 800


>AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein
            protein.
          Length = 1640

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -1

Query: 476  SYLCFLETGFVTPRCLQRCP 417
            S LC  E G+V PRC Q+CP
Sbjct: 961  SGLCLCEAGYVGPRCEQQCP 980


>AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein.
          Length = 1246

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -1

Query: 476 SYLCFLETGFVTPRCLQRCP 417
           S LC  E G+V PRC Q+CP
Sbjct: 798 SGLCLCEAGYVGPRCEQQCP 817


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,202,750
Number of Sequences: 237096
Number of extensions: 2335031
Number of successful extensions: 4009
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4009
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)