Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5870
         (701 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094716-1|AAM11069.1| 1688|Drosophila melanogaster GH16393p pro...    34   0.21 
AE014297-2048|AAF55199.3| 1537|Drosophila melanogaster CG14869-P...    34   0.21 
AE014297-2047|AAS65157.1| 1688|Drosophila melanogaster CG14869-P...    34   0.21 
AE013599-1510|AAM68695.1|  555|Drosophila melanogaster CG8819-PC...    29   6.1  
AE013599-1507|AAO41402.1|  524|Drosophila melanogaster CG8821-PB...    29   6.1  

>AY094716-1|AAM11069.1| 1688|Drosophila melanogaster GH16393p protein.
          Length = 1688

 Score = 33.9 bits (74), Expect = 0.21
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
 Frame = -2

Query: 214  CPALQIETHYCFTVEIGGVAVPTRA--DSQEVLPPVYSRSCRPNGKQ-STSPKTCNYGSS 44
            C  ++    +CF    G +A PTRA  +     PP + R     G   S+ P+     SS
Sbjct: 1419 CEGVEKRRDFCFNSHKGRIACPTRARVERHSCTPPPHCRRRSAIGSSISSRPRGTGVSSS 1478

Query: 43   RSIN 32
            RS+N
Sbjct: 1479 RSLN 1482


>AE014297-2048|AAF55199.3| 1537|Drosophila melanogaster CG14869-PA,
            isoform A protein.
          Length = 1537

 Score = 33.9 bits (74), Expect = 0.21
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
 Frame = -2

Query: 214  CPALQIETHYCFTVEIGGVAVPTRA--DSQEVLPPVYSRSCRPNGKQ-STSPKTCNYGSS 44
            C  ++    +CF    G +A PTRA  +     PP + R     G   S+ P+     SS
Sbjct: 1268 CEGVEKRRDFCFNSHKGRIACPTRARVERHSCTPPPHCRRRSAIGSSISSRPRGTGVSSS 1327

Query: 43   RSIN 32
            RS+N
Sbjct: 1328 RSLN 1331


>AE014297-2047|AAS65157.1| 1688|Drosophila melanogaster CG14869-PB,
            isoform B protein.
          Length = 1688

 Score = 33.9 bits (74), Expect = 0.21
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
 Frame = -2

Query: 214  CPALQIETHYCFTVEIGGVAVPTRA--DSQEVLPPVYSRSCRPNGKQ-STSPKTCNYGSS 44
            C  ++    +CF    G +A PTRA  +     PP + R     G   S+ P+     SS
Sbjct: 1419 CEGVEKRRDFCFNSHKGRIACPTRARVERHSCTPPPHCRRRSAIGSSISSRPRGTGVSSS 1478

Query: 43   RSIN 32
            RS+N
Sbjct: 1479 RSLN 1482


>AE013599-1510|AAM68695.1|  555|Drosophila melanogaster CG8819-PC,
           isoform C protein.
          Length = 555

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -2

Query: 196 ETHYCFTVEIGGVAVPTRADSQEVLPPVYSRSCRPNGKQSTSPKT 62
           ET YC+    GG+ V  R++ +E        SC PN ++    +T
Sbjct: 365 ETMYCYKDSYGGIVVSPRSEGEESAQGY--ESCGPNSEEEVRFET 407


>AE013599-1507|AAO41402.1|  524|Drosophila melanogaster CG8821-PB,
           isoform B protein.
          Length = 524

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -2

Query: 196 ETHYCFTVEIGGVAVPTRADSQEVLPPVYSRSCRPNGKQSTSPKT 62
           ET YC+    GG+ V  R++ +E        SC PN ++    +T
Sbjct: 334 ETMYCYKDSYGGIVVSPRSEGEESAQGY--ESCGPNSEEEVRFET 376


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,199,935
Number of Sequences: 53049
Number of extensions: 699363
Number of successful extensions: 1584
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1584
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)