Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5867
(721 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 75 1e-13
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 75 1e-13
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 68 1e-11
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 68 1e-11
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 68 1e-11
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 68 1e-11
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 64 1e-10
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 64 2e-10
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 64 2e-10
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 62 7e-10
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 62 1e-09
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 61 2e-09
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 61 2e-09
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 60 2e-09
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 58 1e-08
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 58 1e-08
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 58 1e-08
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 58 1e-08
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 58 1e-08
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 55 1e-07
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 54 1e-07
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 51 2e-06
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 50 4e-06
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 47 3e-05
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 46 7e-05
AE014296-1304|AAN12045.1| 9196|Drosophila melanogaster CG32377-P... 30 3.6
BT022698-1|AAY55114.1| 206|Drosophila melanogaster IP07194p pro... 29 6.4
AE014297-1177|AAN13481.1| 196|Drosophila melanogaster CG31373-P... 29 6.4
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 74.5 bits (175), Expect = 1e-13
Identities = 64/241 (26%), Positives = 110/241 (45%), Gaps = 9/241 (3%)
Frame = +3
Query: 3 AFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVLQGPVL 182
AFD VWH LL KL G P L K + +FL R +V ++ S +NAGV QG VL
Sbjct: 613 AFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVL 672
Query: 183 SPTLFILYINDMLSIDG--MHCYADDSTGDARYIGHQSLSRSVVQERRSKLVSEVENSLG 356
PTLF ++ +D+ + +ADD+ + S S + + ++E++
Sbjct: 673 GPTLFNIFTHDIPQATNCVLSLFADDAA-----VYSAGFSYSEINQSMQSYLNELDI--- 724
Query: 357 RVSKWGELNLIQFNPLKTQVCAFTAKKDPFVMAPQFQGV---SLQPSESIGILGVDISSD 527
KW I+ NP KT FT ++ P + + + +Q ++I LG+
Sbjct: 725 YYKKW----KIKINPNKTNAIFFTKRRKPRYLPDRQLRILDSPIQWVDNIRYLGIIFDKK 780
Query: 528 VQFRSHLEGKAKLASKML----GVLNRAKRYFTPGQRLLLYKAQVRPRVGVLLPSLGRGS 695
+ F+ H+ +K++ ++NR K + +++++K P + P GR +
Sbjct: 781 LTFKYHINNTIMKVNKIICTLYPLINR-KSKLSISNKIIIFKTIFNPILMYGSPVWGRCA 839
Query: 696 Q 698
Q
Sbjct: 840 Q 840
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 74.5 bits (175), Expect = 1e-13
Identities = 64/241 (26%), Positives = 110/241 (45%), Gaps = 9/241 (3%)
Frame = +3
Query: 3 AFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVLQGPVL 182
AFD VWH LL KL G P L K + +FL R +V ++ S +NAGV QG VL
Sbjct: 561 AFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVL 620
Query: 183 SPTLFILYINDMLSIDG--MHCYADDSTGDARYIGHQSLSRSVVQERRSKLVSEVENSLG 356
PTLF ++ +D+ + +ADD+ + S S + + ++E++
Sbjct: 621 GPTLFNIFTHDIPQATNCVLSLFADDAA-----VYSAGFSYSEINQSMQSYLNELDI--- 672
Query: 357 RVSKWGELNLIQFNPLKTQVCAFTAKKDPFVMAPQFQGV---SLQPSESIGILGVDISSD 527
KW I+ NP KT FT ++ P + + + +Q ++I LG+
Sbjct: 673 YYKKW----KIKINPNKTNAIFFTKRRKPRYLPDRQLRILDSPIQWVDNIRYLGIIFDKK 728
Query: 528 VQFRSHLEGKAKLASKML----GVLNRAKRYFTPGQRLLLYKAQVRPRVGVLLPSLGRGS 695
+ F+ H+ +K++ ++NR K + +++++K P + P GR +
Sbjct: 729 LTFKYHINNTIMKVNKIICTLYPLINR-KSKLSISNKIIIFKTIFNPILMYGSPVWGRCA 787
Query: 696 Q 698
Q
Sbjct: 788 Q 788
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 67.7 bits (158), Expect = 1e-11
Identities = 66/230 (28%), Positives = 100/230 (43%), Gaps = 12/230 (5%)
Frame = +3
Query: 3 AFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTM-TINAGVLQGPV 179
AFDRVWH LL KL S IP L + ++L R+ +V +DG+ + + I AGV QG +
Sbjct: 189 AFDRVWHDGLLYKL-SRLIPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSI 247
Query: 180 LSPTLFILYINDM---LSIDGMHCYADDSTGDARYIGHQSLSRSVVQERR--SKLVSEV- 341
L P L+ +Y +DM + D M + I +++ R +KL +
Sbjct: 248 LGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLN 307
Query: 342 ENSLGRVSKWGELNLIQFNPLKTQVCAFTAKKDP--FVMAPQFQGVSLQPSESIGILGVD 515
+N L +W + I N KT F+ KK+ P G LG+
Sbjct: 308 QNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTNIYTPPLINGQRAAKLNKQRYLGLM 367
Query: 516 ISSDVQFRSH---LEGKAKLASKMLGVLNRAKRYFTPGQRLLLYKAQVRP 656
+ + F +H L+GK A K L L + ++LL+K V P
Sbjct: 368 LDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSP 417
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 67.7 bits (158), Expect = 1e-11
Identities = 66/230 (28%), Positives = 100/230 (43%), Gaps = 12/230 (5%)
Frame = +3
Query: 3 AFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTM-TINAGVLQGPV 179
AFDRVWH LL KL S IP L + ++L R+ +V +DG+ + + I AGV QG +
Sbjct: 636 AFDRVWHDGLLYKL-SRLIPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSI 694
Query: 180 LSPTLFILYINDM---LSIDGMHCYADDSTGDARYIGHQSLSRSVVQERR--SKLVSEV- 341
L P L+ +Y +DM + D M + I +++ R +KL +
Sbjct: 695 LGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLN 754
Query: 342 ENSLGRVSKWGELNLIQFNPLKTQVCAFTAKKDP--FVMAPQFQGVSLQPSESIGILGVD 515
+N L +W + I N KT F+ KK+ P G LG+
Sbjct: 755 QNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTNIYTPPLINGQRAAKLNKQRYLGLM 814
Query: 516 ISSDVQFRSH---LEGKAKLASKMLGVLNRAKRYFTPGQRLLLYKAQVRP 656
+ + F +H L+GK A K L L + ++LL+K V P
Sbjct: 815 LDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSP 864
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 67.7 bits (158), Expect = 1e-11
Identities = 66/230 (28%), Positives = 100/230 (43%), Gaps = 12/230 (5%)
Frame = +3
Query: 3 AFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTM-TINAGVLQGPV 179
AFDRVWH LL KL S IP L + ++L R+ +V +DG+ + + I AGV QG +
Sbjct: 636 AFDRVWHDGLLYKL-SRLIPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSI 694
Query: 180 LSPTLFILYINDM---LSIDGMHCYADDSTGDARYIGHQSLSRSVVQERR--SKLVSEV- 341
L P L+ +Y +DM + D M + I +++ R +KL +
Sbjct: 695 LGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLN 754
Query: 342 ENSLGRVSKWGELNLIQFNPLKTQVCAFTAKKDP--FVMAPQFQGVSLQPSESIGILGVD 515
+N L +W + I N KT F+ KK+ P G LG+
Sbjct: 755 QNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTNIYTPPLINGQRAAKLNKQRYLGLM 814
Query: 516 ISSDVQFRSH---LEGKAKLASKMLGVLNRAKRYFTPGQRLLLYKAQVRP 656
+ + F +H L+GK A K L L + ++LL+K V P
Sbjct: 815 LDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSP 864
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 67.7 bits (158), Expect = 1e-11
Identities = 66/230 (28%), Positives = 100/230 (43%), Gaps = 12/230 (5%)
Frame = +3
Query: 3 AFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTM-TINAGVLQGPV 179
AFDRVWH LL KL S IP L + ++L R+ +V +DG+ + + I AGV QG +
Sbjct: 636 AFDRVWHDGLLYKL-SRLIPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSI 694
Query: 180 LSPTLFILYINDM---LSIDGMHCYADDSTGDARYIGHQSLSRSVVQERR--SKLVSEV- 341
L P L+ +Y +DM + D M + I +++ R +KL +
Sbjct: 695 LGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLN 754
Query: 342 ENSLGRVSKWGELNLIQFNPLKTQVCAFTAKKDP--FVMAPQFQGVSLQPSESIGILGVD 515
+N L +W + I N KT F+ KK+ P G LG+
Sbjct: 755 QNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTNIYTPPLINGQRAAKLNKQRYLGLM 814
Query: 516 ISSDVQFRSH---LEGKAKLASKMLGVLNRAKRYFTPGQRLLLYKAQVRP 656
+ + F +H L+GK A K L L + ++LL+K V P
Sbjct: 815 LDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSP 864
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 64.5 bits (150), Expect = 1e-10
Identities = 66/224 (29%), Positives = 99/224 (44%), Gaps = 6/224 (2%)
Frame = +3
Query: 3 AFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVLQGPVL 182
AFDRVW LL K+ +P+ K + S+L R + D S I AGV QG VL
Sbjct: 584 AFDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNRVFAIRCDTSTSRDCAIEAGVPQGSVL 642
Query: 183 SPTLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSVVQERRSKLVSEVENSLGRV 362
P L+ LY D ID + + D I LSRS + + L+S L V
Sbjct: 643 GPILYTLYTADF-PID--YNLTTSTFADDTAI----LSRSKCPIKATALLSR---HLTSV 692
Query: 363 SKWGELNLIQFNPLKTQVCAFTAKKD---PFVMAPQFQGVSLQPSESIGILGVDISSDVQ 533
+W I N K + FT K P V+ + + ++ + LGV + +
Sbjct: 693 ERWLADWRISINVQKCKQVTFTLNKQTCPPLVL----NNICIPQADEVTYLGVHLDRRLT 748
Query: 534 FRSHLEGKA---KLASKMLGVLNRAKRYFTPGQRLLLYKAQVRP 656
+R H+E K+ KL ++ L L A+ + + LLY + ++P
Sbjct: 749 WRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKP 792
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 64.1 bits (149), Expect = 2e-10
Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 5/223 (2%)
Frame = +3
Query: 3 AFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVLQGPVL 182
AFD+VW L+ K+ +PE K + S+L R V + S TI AGV QG VL
Sbjct: 586 AFDKVWLDGLMFKI-KISLPESTHKLLKSYLYDRKFAVRCNTATSTVHTIEAGVPQGSVL 644
Query: 183 SPTLFILYINDMLSIDGM--HCYADDSTGDARYIGHQSLSRSVVQERRSKLVSEVENSLG 356
PTL+++Y D+ + + +ADD+ +R SRS +Q +++ L
Sbjct: 645 GPTLYLIYTADIPTNSRLTVSTFADDTAILSR-------SRSPIQ-----ATAQLALYLI 692
Query: 357 RVSKWGELNLIQFNPLKTQVCAFTAKKDPFVMAPQFQGVSLQPSESIGILGVDISSDVQF 536
+ KW I+ N K + FT + + L ++ + LGV + + +
Sbjct: 693 DIKKWLSDWRIKVNEQKCKHVTFTLNRQD-CPPLLLNSIPLPKADEVTYLGVHLDRRLTW 751
Query: 537 RSHLEGK---AKLASKMLGVLNRAKRYFTPGQRLLLYKAQVRP 656
R H+E K KL + L L + + ++LLY + ++P
Sbjct: 752 RRHIEAKKTQLKLKANNLHWLINSGSPLSLDHKVLLYNSILKP 794
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 64.1 bits (149), Expect = 2e-10
Identities = 52/188 (27%), Positives = 81/188 (43%), Gaps = 1/188 (0%)
Frame = +3
Query: 3 AFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVLQGPVL 182
AFDRVWH L+SK+ P + S+L+ R V V S + AGV QG VL
Sbjct: 589 AFDRVWHDGLISKVKKL-FPAPYYGVLKSYLEDRRFMVRVRNSYSIPRVMRAGVPQGSVL 647
Query: 183 SPTLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSVVQERRSKLVSEVENSLGRV 362
P L+ ++ D+ + H A Y +L S ++ ++ L +
Sbjct: 648 GPLLYSVFTADLPCPNAYHMADPRKALLATYADDIALLYS--SNCCNEAARGLQEYLTTL 705
Query: 363 SKWGELNLIQFNPLKTQVCAFTAKKDPFVMAP-QFQGVSLQPSESIGILGVDISSDVQFR 539
+ W + +++ NP KT FT K V AP + +GV L LG+ + + F
Sbjct: 706 AAWCKRWILKVNPQKTINPCFTLKTLSPVTAPIELEGVILDQPSQAKYLGITLDKRLTFG 765
Query: 540 SHLEGKAK 563
HL+ +
Sbjct: 766 PHLKATTR 773
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 62.1 bits (144), Expect = 7e-10
Identities = 65/224 (29%), Positives = 98/224 (43%), Gaps = 6/224 (2%)
Frame = +3
Query: 3 AFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVLQGPVL 182
AFDRVW LL K+ +P+ K + S+L + D S I AGV QG VL
Sbjct: 584 AFDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNTVFAIRCDTSTSRDCAIEAGVPQGSVL 642
Query: 183 SPTLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSVVQERRSKLVSEVENSLGRV 362
P L+ LY D ID + + D I LSRS + + L+S L V
Sbjct: 643 GPILYTLYTADF-PID--YNLTTSTFADDTAI----LSRSKCPIKATALLSR---HLTSV 692
Query: 363 SKWGELNLIQFNPLKTQVCAFTAKKD---PFVMAPQFQGVSLQPSESIGILGVDISSDVQ 533
+W I N K + FT K P V+ + + ++ + LGV + +
Sbjct: 693 ERWLADWRISINVQKCKQVTFTLNKQTCPPLVL----NNICIPQADEVTYLGVHLDRRLT 748
Query: 534 FRSHLEGKA---KLASKMLGVLNRAKRYFTPGQRLLLYKAQVRP 656
+R H+E K+ KL ++ L L A+ + + LLY + ++P
Sbjct: 749 WRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKP 792
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 61.7 bits (143), Expect = 1e-09
Identities = 65/219 (29%), Positives = 93/219 (42%), Gaps = 8/219 (3%)
Frame = +3
Query: 3 AFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD-GDCSDTMTINAGVLQGPV 179
AFDRVWH LL KL +P L + S+L R+ V G+ S T I AGV QG
Sbjct: 633 AFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSN 691
Query: 180 LSPTLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSVVQERRSKLVS-EVENSLG 356
L P L+ ++ +DM + Y T + + + + + + EN L
Sbjct: 692 LGPLLYSIFSSDM---PLPYIYRPSPTERIMLSTYADDTIVLSSDTLATAATRNNENYLK 748
Query: 357 RVSKWGELNLIQFNPLKTQVCAFTAKKD--PFVMAPQFQGVSLQPSESIGILGVDISSDV 530
S W + I N KT FT K D + + +G ++ LGV + S +
Sbjct: 749 SFSDWADKWGISVNAAKTGHVIFTLKNDLPTSLRTMKIKGQVIKIESKQSYLGVILDSKL 808
Query: 531 QFRSH---LEGKAKLA-SKMLGVLNRAKRYFTPGQRLLL 635
SH L GK A KM +LNR + T + L+L
Sbjct: 809 TLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLIL 847
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 60.9 bits (141), Expect = 2e-09
Identities = 52/184 (28%), Positives = 81/184 (44%), Gaps = 2/184 (1%)
Frame = +3
Query: 3 AFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVLQGPVL 182
AFDRVWH LL K P L + SFL+ R+ V VDG S I AGV QG VL
Sbjct: 590 AFDRVWHPGLLYKAKRL-FPPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVL 648
Query: 183 SPTLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSVVQERRSKL--VSEVENSLG 356
PTL+ ++ +DM + H + + I + +V+ + +S L S ++ L
Sbjct: 649 GPTLYSVFASDMPT----HTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLD 704
Query: 357 RVSKWGELNLIQFNPLKTQVCAFTAKKDPFVMAPQFQGVSLQPSESIGILGVDISSDVQF 536
+W E ++ N K F A + G ++ ++ LG+ + + F
Sbjct: 705 AFQQWAENWNVRINAEKCANVTF-ANRTGSCPGVSLNGRLIRHHQAYKYLGITLDRKLTF 763
Query: 537 RSHL 548
H+
Sbjct: 764 SRHI 767
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 60.9 bits (141), Expect = 2e-09
Identities = 52/184 (28%), Positives = 81/184 (44%), Gaps = 2/184 (1%)
Frame = +3
Query: 3 AFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVLQGPVL 182
AFDRVWH LL K P L + SFL+ R+ V VDG S I AGV QG VL
Sbjct: 392 AFDRVWHPGLLYKAKRL-FPPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVL 450
Query: 183 SPTLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSVVQERRSKL--VSEVENSLG 356
PTL+ ++ +DM + H + + I + +V+ + +S L S ++ L
Sbjct: 451 GPTLYSVFASDMPT----HTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLD 506
Query: 357 RVSKWGELNLIQFNPLKTQVCAFTAKKDPFVMAPQFQGVSLQPSESIGILGVDISSDVQF 536
+W E ++ N K F A + G ++ ++ LG+ + + F
Sbjct: 507 AFQQWAENWNVRINAEKCANVTF-ANRTGSCPGVSLNGRLIRHHQAYKYLGITLDRKLTF 565
Query: 537 RSHL 548
H+
Sbjct: 566 SRHI 569
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 60.5 bits (140), Expect = 2e-09
Identities = 62/225 (27%), Positives = 94/225 (41%), Gaps = 7/225 (3%)
Frame = +3
Query: 3 AFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD-GDCSDTMTINAGVLQGPV 179
AFDRVWH LL KL +P L + S+L R+ V G+ S T I AGV QG
Sbjct: 645 AFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSN 703
Query: 180 LSPTLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSVVQERRSKLVS-EVENSLG 356
L P L+ ++ +DM + Y T + + + + + + EN L
Sbjct: 704 LGPLLYSIFSSDM---PLPYIYRPSPTQRIMLSTYADDTIVLSSDTLATAATRNNENYLK 760
Query: 357 RVSKWGELNLIQFNPLKTQVCAFTAKKD--PFVMAPQFQGVSLQPSESIGILGVDISSDV 530
S W + I N KT FT K D M + +G +++ LGV + S +
Sbjct: 761 TFSDWADKWGISVNAAKTGHVIFTLKNDLPTNSMNVKIKGQTIKKESKQSYLGVTLDSKL 820
Query: 531 QFRSH---LEGKAKLASKMLGVLNRAKRYFTPGQRLLLYKAQVRP 656
SH L GK A + L + + ++L+ K+ + P
Sbjct: 821 TLSSHVTKLLGKYSTAYRKLTWILNGRSKLPTKTKILILKSVLSP 865
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 58.0 bits (134), Expect = 1e-08
Identities = 62/225 (27%), Positives = 94/225 (41%), Gaps = 7/225 (3%)
Frame = +3
Query: 3 AFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD-GDCSDTMTINAGVLQGPV 179
AFDRVWH LL KL +P L + S+L R+ V G+ S I AGV QG
Sbjct: 517 AFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSN 575
Query: 180 LSPTLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSVVQERRSKLVSEVENSLGR 359
L P L+ ++ +DM H + + Y + S + + EN L
Sbjct: 576 LGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDI--LATAATRNNENYLKT 633
Query: 360 VSKWGELNLIQFNPLKTQVCAFTAKKD--PFVMAPQFQGVSLQPSESIGILGVDISSDVQ 533
S W + I N KT +T K D + + +G +++ LGV + S +
Sbjct: 634 FSDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILDSKLT 693
Query: 534 FRSHLE---GKAKLA-SKMLGVLNRAKRYFTPGQRLLLYKAQVRP 656
H+ GK A KM +LN + T ++L+ K+ + P
Sbjct: 694 LSPHVTKVVGKYLTAYRKMSWILNERSKLPT-NTKMLILKSVLSP 737
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 58.0 bits (134), Expect = 1e-08
Identities = 62/225 (27%), Positives = 94/225 (41%), Gaps = 7/225 (3%)
Frame = +3
Query: 3 AFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD-GDCSDTMTINAGVLQGPV 179
AFDRVWH LL KL +P L + S+L R+ V G+ S I AGV QG
Sbjct: 633 AFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSN 691
Query: 180 LSPTLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSVVQERRSKLVSEVENSLGR 359
L P L+ ++ +DM H + + Y + S + + EN L
Sbjct: 692 LGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDI--LATAATRNNENYLKT 749
Query: 360 VSKWGELNLIQFNPLKTQVCAFTAKKD--PFVMAPQFQGVSLQPSESIGILGVDISSDVQ 533
S W + I N KT +T K D + + +G +++ LGV + S +
Sbjct: 750 FSDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILDSKLT 809
Query: 534 FRSHLE---GKAKLA-SKMLGVLNRAKRYFTPGQRLLLYKAQVRP 656
H+ GK A KM +LN + T ++L+ K+ + P
Sbjct: 810 LSPHVTKVVGKYLTAYRKMSWILNERSKLPT-NTKMLILKSVLSP 853
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 58.0 bits (134), Expect = 1e-08
Identities = 62/225 (27%), Positives = 94/225 (41%), Gaps = 7/225 (3%)
Frame = +3
Query: 3 AFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD-GDCSDTMTINAGVLQGPV 179
AFDRVWH LL KL +P L + S+L R+ V G+ S I AGV QG
Sbjct: 633 AFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSN 691
Query: 180 LSPTLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSVVQERRSKLVSEVENSLGR 359
L P L+ ++ +DM H + + Y + S + + EN L
Sbjct: 692 LGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDI--LATAATRNNENYLKT 749
Query: 360 VSKWGELNLIQFNPLKTQVCAFTAKKD--PFVMAPQFQGVSLQPSESIGILGVDISSDVQ 533
S W + I N KT +T K D + + +G +++ LGV + S +
Sbjct: 750 FSDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILDSKLT 809
Query: 534 FRSHLE---GKAKLA-SKMLGVLNRAKRYFTPGQRLLLYKAQVRP 656
H+ GK A KM +LN + T ++L+ K+ + P
Sbjct: 810 LSPHVTKVVGKYLTAYRKMSWILNERSKLPT-NTKMLILKSVLSP 853
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 58.0 bits (134), Expect = 1e-08
Identities = 62/225 (27%), Positives = 94/225 (41%), Gaps = 7/225 (3%)
Frame = +3
Query: 3 AFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD-GDCSDTMTINAGVLQGPV 179
AFDRVWH LL KL +P L + S+L R+ V G+ S I AGV QG
Sbjct: 595 AFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSN 653
Query: 180 LSPTLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSVVQERRSKLVSEVENSLGR 359
L P L+ ++ +DM H + + Y + S + + EN L
Sbjct: 654 LGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDI--LATAATRNNENYLKT 711
Query: 360 VSKWGELNLIQFNPLKTQVCAFTAKKD--PFVMAPQFQGVSLQPSESIGILGVDISSDVQ 533
S W + I N KT +T K D + + +G +++ LGV + S +
Sbjct: 712 FSDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILDSKLT 771
Query: 534 FRSHLE---GKAKLA-SKMLGVLNRAKRYFTPGQRLLLYKAQVRP 656
H+ GK A KM +LN + T ++L+ K+ + P
Sbjct: 772 LSPHVTKVVGKYLTAYRKMSWILNERSKLPT-NTKMLILKSVLSP 815
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 58.0 bits (134), Expect = 1e-08
Identities = 62/225 (27%), Positives = 94/225 (41%), Gaps = 7/225 (3%)
Frame = +3
Query: 3 AFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD-GDCSDTMTINAGVLQGPV 179
AFDRVWH LL KL +P L + S+L R+ V G+ S I AGV QG
Sbjct: 633 AFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSN 691
Query: 180 LSPTLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSVVQERRSKLVSEVENSLGR 359
L P L+ ++ +DM H + + Y + S + + EN L
Sbjct: 692 LGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDI--LATAATRNNENYLKT 749
Query: 360 VSKWGELNLIQFNPLKTQVCAFTAKKD--PFVMAPQFQGVSLQPSESIGILGVDISSDVQ 533
S W + I N KT +T K D + + +G +++ LGV + S +
Sbjct: 750 FSDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILDSKLT 809
Query: 534 FRSHLE---GKAKLA-SKMLGVLNRAKRYFTPGQRLLLYKAQVRP 656
H+ GK A KM +LN + T ++L+ K+ + P
Sbjct: 810 LSPHVTKVVGKYLTAYRKMSWILNERSKLPT-NTKMLILKSVLSP 853
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 54.8 bits (126), Expect = 1e-07
Identities = 30/72 (41%), Positives = 39/72 (54%)
Frame = +3
Query: 3 AFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVLQGPVL 182
AFDRVW L+ K+ +P+ + K + S+LD R V S TI AGV QG VL
Sbjct: 125 AFDRVWLDGLMFKIIQL-LPQNIHKLLKSYLDKRVFAVRCSSSTSSDFTIEAGVPQGSVL 183
Query: 183 SPTLFILYINDM 218
P L+ LY D+
Sbjct: 184 GPILYTLYTADI 195
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 54.4 bits (125), Expect = 1e-07
Identities = 47/204 (23%), Positives = 98/204 (48%), Gaps = 6/204 (2%)
Frame = +3
Query: 3 AFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVLQGPVL 182
AF+ +L + + G+P+ + I ++ R + V + D + ++AGV QG VL
Sbjct: 561 AFNTARWPIILGAMRNLGVPDYIRGVIGNYFRDRVLWYVTE-DGPRSHQVSAGVPQGSVL 619
Query: 183 SPTLFILYINDMLSIDG-----MHCYADDSTGDARYIGHQSLSRSVVQERRSKLVSEVEN 347
P L+ + + +LSI +HC+ADD + ++++++ + + ++ N
Sbjct: 620 GPILWNIMYDGILSISKPRGVELHCFADD-------VAITAVAKTIPE------LQDISN 666
Query: 348 -SLGRVSKWGELNLIQFNPLKTQVCAFTAKKDPFVMAPQFQGVSLQPSESIGILGVDISS 524
++ +W E ++ KT+V +++K M + +GV + +E++ LGV I
Sbjct: 667 VAITAAIEWLEKVGLKIAAHKTEVVLLSSRKSVECMRVEVKGVEIASAETLKYLGVLIDR 726
Query: 525 DVQFRSHLEGKAKLASKMLGVLNR 596
+ F++H +K A+ L R
Sbjct: 727 RLSFKAHARYASKKAAMTAAALAR 750
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 50.8 bits (116), Expect = 2e-06
Identities = 29/72 (40%), Positives = 37/72 (51%)
Frame = +3
Query: 3 AFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVLQGPVL 182
AFDRVWH L K+ +P + S+L+GR V S + AGV QG VL
Sbjct: 588 AFDRVWHIGLQLKIKQT-LPAPYFGLLKSYLEGRRFAVRFHSAISTEHNVAAGVPQGSVL 646
Query: 183 SPTLFILYINDM 218
P L+ LY +DM
Sbjct: 647 GPLLYCLYSHDM 658
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 49.6 bits (113), Expect = 4e-06
Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 2/185 (1%)
Frame = +3
Query: 3 AFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVLQGPVL 182
AFDRV A+L +L +GI L I +F+ RS V ++ S++ ++ G+ QG L
Sbjct: 588 AFDRVGIHAVLCRLERWGIGPRLYNLIKAFMTNRSFRVRINNVTSNSHILHNGIPQGSPL 647
Query: 183 SPTLFILYINDMLSIDGMH--CYADDSTGDARYIGHQSLSRSVVQERRSKLVSEVENSLG 356
S LF++ I D+ I H Y DA I + + + V+E+ +++ E
Sbjct: 648 SVVLFMIAIEDINDIVTRHKDIYISLYADDA-IIFTKIKNINTVREKFLEILQE------ 700
Query: 357 RVSKWGELNLIQFNPLKTQVCAFTAKKDPFVMAPQFQGVSLQPSESIGILGVDISSDVQF 536
++ WG + K Q K+ + F +++ + ILG+ + F
Sbjct: 701 -INSWGATSGASLAIEKCQTLHICRKQRCNLSDIVFNSRTIKDVNFLKILGITFDPKLLF 759
Query: 537 RSHLE 551
+ H +
Sbjct: 760 KQHCQ 764
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 46.8 bits (106), Expect = 3e-05
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Frame = +3
Query: 3 AFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVLQGPVL 182
AFDRV +++ +L + + K+I +F+ R ITV V S + + G+ QG +
Sbjct: 580 AFDRVGVHSIIQQLQEWKTGPKIIKYIKNFMSNRKITVRVGPHTSSPLPLFNGIPQGSPI 639
Query: 183 SPTLFILYINDMLSIDGMH------CYADD 254
S LF++ N + +I +H YADD
Sbjct: 640 SVILFLIAFNKLSNIISLHKEIKFNAYADD 669
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 45.6 bits (103), Expect = 7e-05
Identities = 24/73 (32%), Positives = 39/73 (53%)
Frame = +3
Query: 3 AFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVLQGPVL 182
AFD + H ++ L +YG P+G ++ + +G ++ DG S+ GV QG L
Sbjct: 486 AFDSLSHASIYDTLRAYGAPKGFVDYVQNTYEGGGTSLNGDGWSSEEFVPARGVKQGDPL 545
Query: 183 SPTLFILYINDML 221
SP LF L ++ +L
Sbjct: 546 SPILFNLVMDRLL 558
>AE014296-1304|AAN12045.1| 9196|Drosophila melanogaster CG32377-PA
protein.
Length = 9196
Score = 29.9 bits (64), Expect = 3.6
Identities = 24/88 (27%), Positives = 38/88 (43%)
Frame = -2
Query: 558 LCLPDDSETGHRSKCRPQVSQYSRKVAGILLGIAAP*QRGPSSQ*TRKLVSLTG*IESSS 379
L PDDS +P +YS + I P + P S T + S+TG + SS
Sbjct: 6303 LAKPDDSSKSVVETDKPSPKEYSDDETDDEIDIPKPLDK-PISHPTSLVTSVTGSGDKSS 6361
Query: 378 IHPIWRLAPESSPLQTQVLIVSPAPRSE 295
+HP P+S + + ++ P S+
Sbjct: 6362 LHP--EEKPKSPEKKDEKVLAKPDDSSK 6387
>BT022698-1|AAY55114.1| 206|Drosophila melanogaster IP07194p
protein.
Length = 206
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -3
Query: 563 LGFAFQMTPKLDIARNVDPKYPNTLGRLQGYSLELRRHDK 444
L A + P+L+I + K+P ++GYS E+ R+DK
Sbjct: 100 LPLAVFINPELEIISSQVNKHPEGCMSVRGYSAEVERYDK 139
>AE014297-1177|AAN13481.1| 196|Drosophila melanogaster CG31373-PA
protein.
Length = 196
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -3
Query: 563 LGFAFQMTPKLDIARNVDPKYPNTLGRLQGYSLELRRHDK 444
L A + P+L+I + K+P ++GYS E+ R+DK
Sbjct: 90 LPLAVFINPELEIISSQVNKHPEGCMSVRGYSAEVERYDK 129
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,445,102
Number of Sequences: 53049
Number of extensions: 915978
Number of successful extensions: 2691
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2671
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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