Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5867
(721 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 70 2e-12
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 62 3e-10
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 57 1e-08
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 47 1e-05
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ... 37 0.013
Z81115-4|CAB03294.2| 651|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81118-3|CAB03325.1| 346|Caenorhabditis elegans Hypothetical pr... 29 2.5
U00055-5|AAL06044.4| 1182|Caenorhabditis elegans Hypothetical pr... 29 3.3
AL117203-21|CAN86632.1| 171|Caenorhabditis elegans Hypothetical... 29 3.3
AL117203-20|CAB55118.1| 244|Caenorhabditis elegans Hypothetical... 29 3.3
Z73105-3|CAA97441.2| 205|Caenorhabditis elegans Hypothetical pr... 29 4.4
AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical... 28 5.8
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 69.7 bits (163), Expect = 2e-12
Identities = 66/226 (29%), Positives = 97/226 (42%), Gaps = 6/226 (2%)
Frame = +3
Query: 3 AFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVLQGPVL 182
AFDR+ H LL KL S + L W+ FL RS V + S GV QG VL
Sbjct: 24 AFDRLPHDLLLDKLVSLRKNKNLLIWVNEFLSNRSFRVRIGQTLSSRKFATCGVPQGAVL 83
Query: 183 SPTLFILYINDMLSI--DGMHC--YADDSTGDARYIGHQSLSRSVVQERRSKLVSEVENS 350
SP LF +Y+ND+ SI + + C +ADD ++ +++ + ++++
Sbjct: 84 SPLLFGIYVNDISSILPEKVACKQFADD-------------TKLYASTPKTESENNLQSA 130
Query: 351 LGRVSKWGELNLIQFNPLKTQVCAFTAKKDPFVMAPQFQGVSLQPSESIGILGVDISSDV 530
L V W + + + N KT T K G ++ LG IS +
Sbjct: 131 LDAVVDWTKGSKLTLNQSKT--VHVTVGKRRIDFKYHLDGYPIERKAITRDLGFLISEKL 188
Query: 531 QFRSHLEGKAKLASKMLGVLNRAKRYFTPGQRL--LLYKAQVRPRV 662
F H LA L N +Y T ++L LLYK +RPR+
Sbjct: 189 DFSDHWRKCINLAKFQLA--NMFNKYSTSNKKLMILLYKTFIRPRL 232
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 62.5 bits (145), Expect = 3e-10
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 7/213 (3%)
Frame = +3
Query: 39 KLPSYGIPEGLCKWIASFLDGRSITVVVDGDCS-DTMTINAGVLQGPVLSPTLFILYIND 215
KL +G+ C W FL+ R+ +V ++ S ++ I++GV QG V P LFIL+IN+
Sbjct: 839 KLAKFGLDSLTCSWYKEFLENRTFSVKINKFVSKNSYPISSGVPQGSVSGPLLFILFINN 898
Query: 216 MLSID-----GMHCYADDSTGDARYIGHQSLSRSVVQERRSKLVSEVENSLGRVSKWGEL 380
+L ID + C+ADD I H + ++NS+ + W +L
Sbjct: 899 LL-IDLAPTINISCFADDVK-----IFHTD-------------PTIIQNSIDIIVSWSKL 939
Query: 381 NLIQFNPLKTQVCAF-TAKKDPFVMAPQFQGVSLQPSESIGILGVDISSDVQFRSHLEGK 557
N + P K+ + A T K+ + GV + PS ++ LG+ ++F H+
Sbjct: 940 NELPLAPTKSALLALGTRNKN---QSYSVDGVPITPSSTVRDLGLITDCKLKFEHHIVKV 996
Query: 558 AKLASKMLGVLNRAKRYFTPGQRLLLYKAQVRP 656
+ LA + +A +P LYK V P
Sbjct: 997 SCLAMLRSKQILKAFSSNSPKFYAHLYKTYVAP 1029
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 56.8 bits (131), Expect = 1e-08
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +3
Query: 3 AFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTM-TINAGVLQGPV 179
AFD+V H LL KL +GI C W FL R+ +V V+ + I++GV +G V
Sbjct: 3 AFDQVNHSLLLQKLHDFGINPLFCNWFHDFLSSRTFSVKVNNHIDPNIHPISSGVPKGSV 62
Query: 180 LSPTLFILYINDML 221
P LF+++IN +L
Sbjct: 63 SGPFLFLIFINSLL 76
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 47.2 bits (107), Expect = 1e-05
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Frame = +3
Query: 3 AFDRVWHRALLSKL-PSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVLQGPV 179
AFD+V + L + L + GI + W+ ++L R I D S T+ GV QG V
Sbjct: 479 AFDKVPTKKLCNDLMEAQGIEPKIKLWLGNYLHKRLIRTSHDNHWSKWHTLLGGVPQGSV 538
Query: 180 LSPTLFILYINDMLSIDG--MHCYADDSTGDAR 272
+SP LF Y+ DM + + YADD + AR
Sbjct: 539 ISPNLFTFYLKDMPTQQDTMLISYADDMSIIAR 571
>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
protein Y113G7B.12 protein.
Length = 1042
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +3
Query: 3 AFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDC-SDTMTINAGVLQGPV 179
AFD+V H L+SKL + + L W + ++ +V V+ S+ G +G
Sbjct: 897 AFDKVPHEFLISKLNDFNVHPTLRNWFRKLMSPKTFSVQVNDHLESEKHNCQIGAPRGSE 956
Query: 180 LSPTLFILYINDML 221
+F+++IN +L
Sbjct: 957 SRQFMFLVFINSLL 970
>Z81115-4|CAB03294.2| 651|Caenorhabditis elegans Hypothetical
protein T05D4.4 protein.
Length = 651
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = -2
Query: 405 LTG*IESSSIHPIWRLAPESSPLQTQVLIVSPAPRSERDSDGRYIAHPP 259
L G + +S++P P+ +PL+ + L ++P R +RD++ + PP
Sbjct: 276 LPGSPDQASVNPYG--LPQPAPLRNRALALAPIRRQKRDAENEDLVVPP 322
>Z81118-3|CAB03325.1| 346|Caenorhabditis elegans Hypothetical
protein T10G3.2 protein.
Length = 346
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = -1
Query: 325 FDRLSCTTLRERL*WPIYRASPVLSSA*QCMPSIDSMSLIYRMKSVGESTGP 170
F ++ C +LR R P+ R+ P+ S S+ ++ ++ M GE+ GP
Sbjct: 283 FSQMCCNSLRRR---PVRRSHPISPSPGTSPSSVVTIQNVFGMTLSGEANGP 331
>U00055-5|AAL06044.4| 1182|Caenorhabditis elegans Hypothetical protein
R02F2.2 protein.
Length = 1182
Score = 29.1 bits (62), Expect = 3.3
Identities = 31/129 (24%), Positives = 51/129 (39%)
Frame = -1
Query: 460 CGAMTKGSFFAVNAQTCVFNGLN*IKFNSPHLETRPREFSTSDTSFDRLSCTTLRERL*W 281
CG + F + N N + F L R R+SC T+ W
Sbjct: 1022 CGRKSTEVFVVDVFNLSIINHFNVVSFVRSQLSGREHILREHKMGCLRISCLTVARSHLW 1081
Query: 280 PIYRASPVLSSA*QCMPSIDSMSLIYRMKSVGESTGPCRTPALMVMVSEQSPSTTTVMLR 101
A VLS++ Q S + L R+ +G S GPCR +++ +PS + R
Sbjct: 1082 IGTSAGCVLSTSVQSARSQPTPDL--RVCEIGHS-GPCR-----ILLPVHTPSHSNHPSR 1133
Query: 100 PSKKLAIHL 74
K+ ++++
Sbjct: 1134 KQKRSSLNV 1142
>AL117203-21|CAN86632.1| 171|Caenorhabditis elegans Hypothetical
protein Y48C3A.18b protein.
Length = 171
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 127 AIALIP*PLTLAFYKVRCSPPRFSSCISMTCCQLMAC 237
A L+P P+TL F ++ C P F+ + C++ C
Sbjct: 14 ANCLLPGPVTLMFERLPCLPAEFNPGVVNVACRVPDC 50
>AL117203-20|CAB55118.1| 244|Caenorhabditis elegans Hypothetical
protein Y48C3A.18a protein.
Length = 244
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 127 AIALIP*PLTLAFYKVRCSPPRFSSCISMTCCQLMAC 237
A L+P P+TL F ++ C P F+ + C++ C
Sbjct: 87 ANCLLPGPVTLMFERLPCLPAEFNPGVVNVACRVPDC 123
>Z73105-3|CAA97441.2| 205|Caenorhabditis elegans Hypothetical
protein R13.2 protein.
Length = 205
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/61 (29%), Positives = 24/61 (39%)
Frame = +2
Query: 416 LRVHCEEGPLCHGAAIPRSIPATFREYWDTWGRHFERCPVSESSGRQSQVGVQNAGSPQQ 595
L VHC + C + I S P T + ++ W E ES S V +GS
Sbjct: 2 LDVHCCDHEQCGSSVIDLSTPHTLQRDFNNWLNGIEVPNSYESQQSDSSSSVDESGSKTS 61
Query: 596 S 598
S
Sbjct: 62 S 62
>AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical
protein T24C4.7 protein.
Length = 798
Score = 28.3 bits (60), Expect = 5.8
Identities = 26/108 (24%), Positives = 50/108 (46%)
Frame = +3
Query: 342 ENSLGRVSKWGELNLIQFNPLKTQVCAFTAKKDPFVMAPQFQGVSLQPSESIGILGVDIS 521
+N LG ++W E +QF V + K P M F+ + + + ++ G +
Sbjct: 387 QNELGTRNRWVEQ--LQF-----LVMEYNQKPIPDRMETPFERMFNRKAPNLYHNGDN-- 437
Query: 522 SDVQFRSHLEGKAKLASKMLGVLNRAKRYFTPGQRLLLYKAQVRPRVG 665
++ ++ ++L ++ GV NR F PG+++ L K +PR G
Sbjct: 438 QEIIHDKYISYHSELRNEEEGVENRLNTSFEPGRKVFLRKGITKPRRG 485
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,142,407
Number of Sequences: 27780
Number of extensions: 444255
Number of successful extensions: 1293
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1291
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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