Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5867
         (721 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    25   0.95 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    25   0.95 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   5.1  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   6.7  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   6.7  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    21   8.9  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   8.9  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 24.6 bits (51), Expect = 0.95
 Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = -3

Query: 485 RLQGYSLELRRHDKGVLLRSERANLCL*RVELNQVQFTPFGDSPQR--VLHFR 333
           +L+G    +  +D+GV  ++   N+       ++V+F   GD   R  +L+FR
Sbjct: 354 KLKGLCPSMANYDRGVFYKNYLLNVSFIDAAGSEVKFDEHGDGLARYEILNFR 406


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 24.6 bits (51), Expect = 0.95
 Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = -3

Query: 485 RLQGYSLELRRHDKGVLLRSERANLCL*RVELNQVQFTPFGDSPQR--VLHFR 333
           +L+G    +  +D+GV  ++   N+       ++V+F   GD   R  +L+FR
Sbjct: 444 KLKGLCPSMANYDRGVFYKNYLLNVSFIDAAGSEVKFDEHGDGLARYEILNFR 496


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 5/20 (25%), Positives = 12/20 (60%)
 Frame = +1

Query: 556 KPSWRPKCWESSTERSGTSR 615
           +P+W+   W+   ++  TS+
Sbjct: 419 EPAWKTHVWKKGRDKKSTSK 438


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +2

Query: 509 GRHFERCPVSESSGRQSQVGVQNAG 583
           G H    P S  SG+Q Q  +Q  G
Sbjct: 812 GLHINSSPSSVQSGQQQQSVLQGLG 836


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -1

Query: 265 SPVLSSA*QCMPSIDSMSLI 206
           +PVL S  Q  PSIDS + I
Sbjct: 531 TPVLPSRFQSHPSIDSANTI 550


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 180 APDLVERQR*WSWYQSNRRL 121
           +PDLVE      W + N RL
Sbjct: 192 SPDLVETDMTAQWLKENSRL 211


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 309 QERRSKLVSEVENSLGRVSKW 371
           QER S+LV  +EN    V  W
Sbjct: 465 QERESELVPYLENKGNGVYAW 485


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,159
Number of Sequences: 438
Number of extensions: 5097
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)