Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5859
         (709 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC057236-1|AAH57236.1|  270|Homo sapiens ATP8B4 protein protein.       31   5.3  
AK025125-1|BAB15072.1|  195|Homo sapiens roto-LBC) mRNA.  protein.     31   5.3  
AB075819-1|BAB85525.1| 1082|Homo sapiens KIAA1939 protein protein.     31   5.3  
BC018723-1|AAH18723.1|  424|Homo sapiens carbohydrate (N-acetylg...    30   9.3  
BC014250-1|AAH14250.1|  424|Homo sapiens CHST8 protein protein.        30   9.3  
BC011380-1|AAH11380.1|  424|Homo sapiens CHST8 protein protein.        30   9.3  
AF305781-1|AAL09373.1|  424|Homo sapiens GalNAc-4-O-sulfotransfe...    30   9.3  
AB047801-1|BAB19806.1|  424|Homo sapiens GalNAc 4-sulfotransfera...    30   9.3  

>BC057236-1|AAH57236.1|  270|Homo sapiens ATP8B4 protein protein.
          Length = 270

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -3

Query: 287 SLVFTMVSRGIASVGPNSAPVVDSAQH 207
           S++FTM S GI  + PN  P V +A+H
Sbjct: 112 SILFTMHSNGIFGIFPNQFPFVGNARH 138


>AK025125-1|BAB15072.1|  195|Homo sapiens roto-LBC) mRNA.  protein.
          Length = 195

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -3

Query: 287 SLVFTMVSRGIASVGPNSAPVVDSAQH 207
           S++FTM S GI  + PN  P V +A+H
Sbjct: 37  SILFTMHSNGIFGIFPNQFPFVGNARH 63


>AB075819-1|BAB85525.1| 1082|Homo sapiens KIAA1939 protein protein.
          Length = 1082

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -3

Query: 287  SLVFTMVSRGIASVGPNSAPVVDSAQH 207
            S++FTM S GI  + PN  P V +A+H
Sbjct: 924  SILFTMHSNGIFGIFPNQFPFVGNARH 950


>BC018723-1|AAH18723.1|  424|Homo sapiens carbohydrate
           (N-acetylgalactosamine 4-0) sulfotransferase 8 protein.
          Length = 424

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = -2

Query: 705 YALRKAREALHGVSHQELPRKTDYRLNPHRAPPLRLHETHGTAQCAP 565
           Y    +REAL   S    P    Y L+ HR   + +H  H +  C+P
Sbjct: 291 YRANASREALRTGSGVRFPEFVQYLLDVHRPVGMDIHWDHVSRLCSP 337


>BC014250-1|AAH14250.1|  424|Homo sapiens CHST8 protein protein.
          Length = 424

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = -2

Query: 705 YALRKAREALHGVSHQELPRKTDYRLNPHRAPPLRLHETHGTAQCAP 565
           Y    +REAL   S    P    Y L+ HR   + +H  H +  C+P
Sbjct: 291 YRANASREALRTGSGVRFPEFVQYLLDVHRPVGMDIHWDHVSRLCSP 337


>BC011380-1|AAH11380.1|  424|Homo sapiens CHST8 protein protein.
          Length = 424

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = -2

Query: 705 YALRKAREALHGVSHQELPRKTDYRLNPHRAPPLRLHETHGTAQCAP 565
           Y    +REAL   S    P    Y L+ HR   + +H  H +  C+P
Sbjct: 291 YRANASREALRTGSGVRFPEFVQYLLDVHRPVGMDIHWDHVSRLCSP 337


>AF305781-1|AAL09373.1|  424|Homo sapiens
           GalNAc-4-O-sulfotransferase 1 protein.
          Length = 424

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = -2

Query: 705 YALRKAREALHGVSHQELPRKTDYRLNPHRAPPLRLHETHGTAQCAP 565
           Y    +REAL   S    P    Y L+ HR   + +H  H +  C+P
Sbjct: 291 YRANASREALRTGSGVRFPEFVQYLLDVHRPVGMDIHWDHVSRLCSP 337


>AB047801-1|BAB19806.1|  424|Homo sapiens GalNAc 4-sulfotransferase
           protein.
          Length = 424

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = -2

Query: 705 YALRKAREALHGVSHQELPRKTDYRLNPHRAPPLRLHETHGTAQCAP 565
           Y    +REAL   S    P    Y L+ HR   + +H  H +  C+P
Sbjct: 291 YRANASREALRTGSGVRFPEFVQYLLDVHRPVGMDIHWDHVSRLCSP 337


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,140,751
Number of Sequences: 237096
Number of extensions: 1892031
Number of successful extensions: 4143
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4141
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)