Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5855
(672 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001706-1|AAH01706.1| 161|Homo sapiens chromosome 11 open read... 57 5e-08
AK000632-1|BAA91297.1| 161|Homo sapiens protein ( Homo sapiens ... 57 5e-08
CR457247-1|CAG33528.1| 161|Homo sapiens FLJ20625 protein. 54 6e-07
Z96050-2|CAI19034.1| 1254|Homo sapiens chromosome 1 open reading... 35 0.30
Z96050-1|CAI19033.1| 1406|Homo sapiens chromosome 1 open reading... 35 0.30
Z94054-2|CAI19460.1| 1254|Homo sapiens chromosome 1 open reading... 35 0.30
Z94054-1|CAI19459.1| 1406|Homo sapiens chromosome 1 open reading... 35 0.30
AL035291-1|CAA22894.1| 1254|Homo sapiens hypothetical protein pr... 35 0.30
AJ250075-1|CAB57360.1| 1254|Homo sapiens hypothetical protein pr... 35 0.30
AF097535-1|AAF04619.1| 1405|Homo sapiens membrane protein CH1 pr... 34 0.40
AF167615-1|AAF15448.1| 89|Homo sapiens immunoglobulin heavy ch... 31 3.8
AF167611-1|AAF15444.1| 89|Homo sapiens immunoglobulin heavy ch... 31 3.8
Y08766-1|CAA70019.1| 638|Homo sapiens SF1-Bo isoform protein. 31 5.0
Y08765-1|CAA70018.1| 639|Homo sapiens SF1-Hl1 isoform protein. 31 5.0
L49380-1|AAB04033.1| 639|Homo sapiens transcription factor ZFM1... 31 5.0
D26120-2|BAA05117.1| 623|Homo sapiens ZFM1 protein protein. 31 5.0
BC000773-1|AAH00773.1| 265|Homo sapiens Similar to zinc finger ... 31 5.0
U47924-15|AAB51321.1| 1190|Homo sapiens DRPLA protein. 30 6.6
U23851-1|AAB50276.1| 1184|Homo sapiens atrophin-1 protein. 30 6.6
D38529-1|BAA07534.1| 1182|Homo sapiens DRPLA protein protein. 30 6.6
D31840-1|BAA06626.1| 1185|Homo sapiens DRPLA protein. 30 6.6
BC065551-1|AAH65551.1| 440|Homo sapiens WAS/WASL interacting pr... 30 6.6
BC051795-1|AAH51795.1| 1191|Homo sapiens atrophin 1 protein. 30 6.6
AK075032-1|BAC11364.1| 524|Homo sapiens protein ( Homo sapiens ... 30 6.6
AJ431177-1|CAD24007.1| 440|Homo sapiens WIRE protein protein. 30 6.6
AF053356-14|AAC78803.1| 318|Homo sapiens nucleoporin protein. 30 6.6
AB209345-1|BAD92582.1| 774|Homo sapiens atrophin-1 variant prot... 30 6.6
AB043786-1|BAB85113.1| 440|Homo sapiens WICH protein. 30 6.6
AL662870-8|CAM25687.1| 493|Homo sapiens discoidin domain recept... 30 8.7
AL662854-8|CAM24838.1| 493|Homo sapiens discoidin domain recept... 30 8.7
AK130776-1|BAC85426.1| 441|Homo sapiens protein ( Homo sapiens ... 30 8.7
>BC001706-1|AAH01706.1| 161|Homo sapiens chromosome 11 open reading
frame 59 protein.
Length = 161
Score = 57.2 bits (132), Expect = 5e-08
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 2/157 (1%)
Frame = +2
Query: 140 MGCCYSICHKDNDPQENVINERTHLLEVTEQQQETLVPVVSA--STPPRKPDEQTALNRI 313
MGCCYS ++D+D ER LL+ + + L S P + DEQ L+ I
Sbjct: 1 MGCCYSSENEDSDQDRE---ERKLLLDPSSPPTKALNGAEPNYHSLPSARTDEQALLSSI 57
Query: 314 LHETANNVIDVGALGPYTLEASAYSEXXXXXXXXXXXXXXXXXXXXXXLLADVTHAERVA 493
L +TA+N+IDV A +E Y + ++
Sbjct: 58 LAKTASNIIDVSAADSQGMEQHEYMDRARQYSTRLAVLSSSLTHWKKLPPLPSLTSQPHQ 117
Query: 494 LLSCPPIPAADKELISGAVRRAAAAISELRVEHREDL 604
+L+ PIP +D + +S A +A+S++RV+ +E+L
Sbjct: 118 VLASEPIPFSDLQQVSRIAAYAYSALSQIRVDAKEEL 154
>AK000632-1|BAA91297.1| 161|Homo sapiens protein ( Homo sapiens
cDNA FLJ20625 fis, clone KAT04008. ).
Length = 161
Score = 57.2 bits (132), Expect = 5e-08
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 2/157 (1%)
Frame = +2
Query: 140 MGCCYSICHKDNDPQENVINERTHLLEVTEQQQETLVPVVSA--STPPRKPDEQTALNRI 313
MGCCYS ++D+D ER LL+ + + L S P + DEQ L+ I
Sbjct: 1 MGCCYSSENEDSDQDRE---ERKLLLDPSSPPTKALNGAEPNYHSLPSARTDEQALLSSI 57
Query: 314 LHETANNVIDVGALGPYTLEASAYSEXXXXXXXXXXXXXXXXXXXXXXLLADVTHAERVA 493
L +TA+N+IDV A +E Y + ++
Sbjct: 58 LAKTASNIIDVSAADSQGMEQHEYMDRARQYSTRLAVLSSSLTHWKKLPPLPSLTSQPHQ 117
Query: 494 LLSCPPIPAADKELISGAVRRAAAAISELRVEHREDL 604
+L+ PIP +D + +S A +A+S++RV+ +E+L
Sbjct: 118 VLASEPIPFSDLQQVSRIAAYAYSALSQIRVDAKEEL 154
>CR457247-1|CAG33528.1| 161|Homo sapiens FLJ20625 protein.
Length = 161
Score = 53.6 bits (123), Expect = 6e-07
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 2/157 (1%)
Frame = +2
Query: 140 MGCCYSICHKDNDPQENVINERTHLLEVTEQQQETL--VPVVSASTPPRKPDEQTALNRI 313
MGCCYS ++D+D ER LL+ + + L S P + D Q L+ I
Sbjct: 1 MGCCYSSENEDSDQDR---EERKLLLDPSSPPTKALNGAEPNYHSLPSARTDVQALLSSI 57
Query: 314 LHETANNVIDVGALGPYTLEASAYSEXXXXXXXXXXXXXXXXXXXXXXLLADVTHAERVA 493
L +TA+N+IDV A +E Y + ++
Sbjct: 58 LAKTASNIIDVPAADSQGMEQHEYMDRARQYSTRLAVLSSSLTHWKKLPPLPSLTSQPHQ 117
Query: 494 LLSCPPIPAADKELISGAVRRAAAAISELRVEHREDL 604
+L+ PIP +D + +S A +A+S++RV+ +E+L
Sbjct: 118 VLASEPIPFSDLQQVSRIAAYAYSALSQIRVDAKEEL 154
>Z96050-2|CAI19034.1| 1254|Homo sapiens chromosome 1 open reading
frame 9 protein.
Length = 1254
Score = 34.7 bits (76), Expect = 0.30
Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +2
Query: 164 HKDNDPQENVINERTHLLEVTEQQQETLVPVVSASTPPRKPDEQTALN--RILHETANNV 337
+K N+ +N+I E + +++ + ET+VP ++ +T P D + +N +T +V
Sbjct: 797 NKVNELMDNIIKEDVNSMQIFTKLSETIVPPINTATVPDNEDGEAKMNIADTAKQTLISV 856
Query: 338 IDVGAL 355
+D +L
Sbjct: 857 VDSSSL 862
>Z96050-1|CAI19033.1| 1406|Homo sapiens chromosome 1 open reading
frame 9 protein.
Length = 1406
Score = 34.7 bits (76), Expect = 0.30
Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +2
Query: 164 HKDNDPQENVINERTHLLEVTEQQQETLVPVVSASTPPRKPDEQTALN--RILHETANNV 337
+K N+ +N+I E + +++ + ET+VP ++ +T P D + +N +T +V
Sbjct: 949 NKVNELMDNIIKEDVNSMQIFTKLSETIVPPINTATVPDNEDGEAKMNIADTAKQTLISV 1008
Query: 338 IDVGAL 355
+D +L
Sbjct: 1009 VDSSSL 1014
>Z94054-2|CAI19460.1| 1254|Homo sapiens chromosome 1 open reading
frame 9 protein.
Length = 1254
Score = 34.7 bits (76), Expect = 0.30
Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +2
Query: 164 HKDNDPQENVINERTHLLEVTEQQQETLVPVVSASTPPRKPDEQTALN--RILHETANNV 337
+K N+ +N+I E + +++ + ET+VP ++ +T P D + +N +T +V
Sbjct: 797 NKVNELMDNIIKEDVNSMQIFTKLSETIVPPINTATVPDNEDGEAKMNIADTAKQTLISV 856
Query: 338 IDVGAL 355
+D +L
Sbjct: 857 VDSSSL 862
>Z94054-1|CAI19459.1| 1406|Homo sapiens chromosome 1 open reading
frame 9 protein.
Length = 1406
Score = 34.7 bits (76), Expect = 0.30
Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +2
Query: 164 HKDNDPQENVINERTHLLEVTEQQQETLVPVVSASTPPRKPDEQTALN--RILHETANNV 337
+K N+ +N+I E + +++ + ET+VP ++ +T P D + +N +T +V
Sbjct: 949 NKVNELMDNIIKEDVNSMQIFTKLSETIVPPINTATVPDNEDGEAKMNIADTAKQTLISV 1008
Query: 338 IDVGAL 355
+D +L
Sbjct: 1009 VDSSSL 1014
>AL035291-1|CAA22894.1| 1254|Homo sapiens hypothetical protein
protein.
Length = 1254
Score = 34.7 bits (76), Expect = 0.30
Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +2
Query: 164 HKDNDPQENVINERTHLLEVTEQQQETLVPVVSASTPPRKPDEQTALN--RILHETANNV 337
+K N+ +N+I E + +++ + ET+VP ++ +T P D + +N +T +V
Sbjct: 797 NKVNELMDNIIKEDVNSMQIFTKLSETIVPPINTATVPDNEDGEAKMNIADTAKQTLISV 856
Query: 338 IDVGAL 355
+D +L
Sbjct: 857 VDSSSL 862
>AJ250075-1|CAB57360.1| 1254|Homo sapiens hypothetical protein
protein.
Length = 1254
Score = 34.7 bits (76), Expect = 0.30
Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +2
Query: 164 HKDNDPQENVINERTHLLEVTEQQQETLVPVVSASTPPRKPDEQTALN--RILHETANNV 337
+K N+ +N+I E + +++ + ET+VP ++ +T P D + +N +T +V
Sbjct: 797 NKVNELMDNIIKEDVNSMQIFTKLSETIVPPINTATVPDNEDGEAKMNIADTAKQTLISV 856
Query: 338 IDVGAL 355
+D +L
Sbjct: 857 VDSSSL 862
>AF097535-1|AAF04619.1| 1405|Homo sapiens membrane protein CH1
protein.
Length = 1405
Score = 34.3 bits (75), Expect = 0.40
Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +2
Query: 164 HKDNDPQENVINERTHLLEVTEQQQETLVPVVSASTPPRKPDEQTALN--RILHETANNV 337
+K N+ +N+I E + +++ + ET+VP ++ +T P D + +N +T +V
Sbjct: 948 NKVNELMDNIIKEDMNSMQIFTKLSETIVPPINTATVPDNEDGEAKMNIADTAKQTLISV 1007
Query: 338 IDVGAL 355
+D +L
Sbjct: 1008 VDSSSL 1013
>AF167615-1|AAF15448.1| 89|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 89
Score = 31.1 bits (67), Expect = 3.8
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 47 HAKRSRYKTFMQSDDEDTSLHSCFNSLKTAVMGCCYSICHKD 172
+AK S Y EDT+L+ C + T V GC C+ +
Sbjct: 39 NAKNSLYLQMNSLRAEDTALYYCAKDINTGVRGCSGGSCYSN 80
>AF167611-1|AAF15444.1| 89|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 89
Score = 31.1 bits (67), Expect = 3.8
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 47 HAKRSRYKTFMQSDDEDTSLHSCFNSLKTAVMGCCYSICHKD 172
+AK S Y EDT+L+ C + T V GC C+ +
Sbjct: 39 NAKNSLYLQMNSLRAEDTALYYCAKDINTGVRGCSGGSCYSN 80
>Y08766-1|CAA70019.1| 638|Homo sapiens SF1-Bo isoform protein.
Length = 638
Score = 30.7 bits (66), Expect = 5.0
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +3
Query: 465 PTSPTPSEWPYSAVPQYRPQIRS**AAQ*DEPPPPYRSSGSSTGRTWW--CPSGSPRAGA 638
P S P P +P ++ Q + Q PPPP S SST W + + AG
Sbjct: 484 PPSGQPPPPPSGPLPPWQQQQQ-----QPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGT 538
Query: 639 GAVPP 653
G++PP
Sbjct: 539 GSIPP 543
>Y08765-1|CAA70018.1| 639|Homo sapiens SF1-Hl1 isoform protein.
Length = 639
Score = 30.7 bits (66), Expect = 5.0
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +3
Query: 465 PTSPTPSEWPYSAVPQYRPQIRS**AAQ*DEPPPPYRSSGSSTGRTWW--CPSGSPRAGA 638
P S P P +P ++ Q + Q PPPP S SST W + + AG
Sbjct: 484 PPSGQPPPPPSGPLPPWQQQQQ-----QPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGT 538
Query: 639 GAVPP 653
G++PP
Sbjct: 539 GSIPP 543
>L49380-1|AAB04033.1| 639|Homo sapiens transcription factor ZFM1
protein.
Length = 639
Score = 30.7 bits (66), Expect = 5.0
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +3
Query: 465 PTSPTPSEWPYSAVPQYRPQIRS**AAQ*DEPPPPYRSSGSSTGRTWW--CPSGSPRAGA 638
P S P P +P ++ Q + Q PPPP S SST W + + AG
Sbjct: 484 PPSGQPPPPPSGPLPPWQQQQQ-----QPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGT 538
Query: 639 GAVPP 653
G++PP
Sbjct: 539 GSIPP 543
>D26120-2|BAA05117.1| 623|Homo sapiens ZFM1 protein protein.
Length = 623
Score = 30.7 bits (66), Expect = 5.0
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +3
Query: 465 PTSPTPSEWPYSAVPQYRPQIRS**AAQ*DEPPPPYRSSGSSTGRTWW--CPSGSPRAGA 638
P S P P +P ++ Q + Q PPPP S SST W + + AG
Sbjct: 484 PPSGQPPPPPSGPLPPWQQQQQ-----QPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGT 538
Query: 639 GAVPP 653
G++PP
Sbjct: 539 GSIPP 543
>BC000773-1|AAH00773.1| 265|Homo sapiens Similar to zinc finger
protein 162 protein.
Length = 265
Score = 30.7 bits (66), Expect = 5.0
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +3
Query: 465 PTSPTPSEWPYSAVPQYRPQIRS**AAQ*DEPPPPYRSSGSSTGRTWW--CPSGSPRAGA 638
P S P P +P ++ Q + Q PPPP S SST W + + AG
Sbjct: 110 PPSGQPPPPPSGPLPPWQQQQQ-----QPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGT 164
Query: 639 GAVPP 653
G++PP
Sbjct: 165 GSIPP 169
>U47924-15|AAB51321.1| 1190|Homo sapiens DRPLA protein.
Length = 1190
Score = 30.3 bits (65), Expect = 6.6
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +3
Query: 471 SPTPSEWPYSAVPQYRPQIRS**AAQ*DEPPPPYRSSGSSTGRTWWCPSGSPRAGAGAVP 650
+P+P + + P Y+P + PP YR + G + P GSP G G +P
Sbjct: 643 APSPGAYKTATPPGYKPGSPP---SFRTGTPPGYRGTSPPAGPGTFKP-GSPTVGPGPLP 698
Query: 651 PLG 659
P G
Sbjct: 699 PAG 701
>U23851-1|AAB50276.1| 1184|Homo sapiens atrophin-1 protein.
Length = 1184
Score = 30.3 bits (65), Expect = 6.6
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +3
Query: 471 SPTPSEWPYSAVPQYRPQIRS**AAQ*DEPPPPYRSSGSSTGRTWWCPSGSPRAGAGAVP 650
+P+P + + P Y+P + PP YR + G + P GSP G G +P
Sbjct: 637 APSPGAYKTATPPGYKPGSPP---SFRTGTPPGYRGTSPPAGPGTFKP-GSPTVGPGPLP 692
Query: 651 PLG 659
P G
Sbjct: 693 PAG 695
>D38529-1|BAA07534.1| 1182|Homo sapiens DRPLA protein protein.
Length = 1182
Score = 30.3 bits (65), Expect = 6.6
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +3
Query: 471 SPTPSEWPYSAVPQYRPQIRS**AAQ*DEPPPPYRSSGSSTGRTWWCPSGSPRAGAGAVP 650
+P+P + + P Y+P + PP YR + G + P GSP G G +P
Sbjct: 638 APSPGAYKTATPPGYKPGSPP---SFRTGTPPGYRGTSPPAGPGTFKP-GSPTVGPGPLP 693
Query: 651 PLG 659
P G
Sbjct: 694 PAG 696
>D31840-1|BAA06626.1| 1185|Homo sapiens DRPLA protein.
Length = 1185
Score = 30.3 bits (65), Expect = 6.6
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +3
Query: 471 SPTPSEWPYSAVPQYRPQIRS**AAQ*DEPPPPYRSSGSSTGRTWWCPSGSPRAGAGAVP 650
+P+P + + P Y+P + PP YR + G + P GSP G G +P
Sbjct: 638 APSPGAYKTATPPGYKPGSPP---SFRTGTPPGYRGTSPPAGPGTFKP-GSPTVGPGPLP 693
Query: 651 PLG 659
P G
Sbjct: 694 PAG 696
>BC065551-1|AAH65551.1| 440|Homo sapiens WAS/WASL interacting
protein family, member 2 protein.
Length = 440
Score = 30.3 bits (65), Expect = 6.6
Identities = 22/62 (35%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Frame = +3
Query: 474 PTPSEWPYS--AVPQYRPQIRS**AAQ*DEPPPPYRSSGSSTGRTWWCPSGSPRAGAGAV 647
P P+ P S A P P + A PPPPYR GS P R AG
Sbjct: 312 PPPARDPPSRGAAPPPPPPVIRNGARDAPPPPPPYRMHGSEPPSRGKPPPPPSRTPAGPP 371
Query: 648 PP 653
PP
Sbjct: 372 PP 373
>BC051795-1|AAH51795.1| 1191|Homo sapiens atrophin 1 protein.
Length = 1191
Score = 30.3 bits (65), Expect = 6.6
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +3
Query: 471 SPTPSEWPYSAVPQYRPQIRS**AAQ*DEPPPPYRSSGSSTGRTWWCPSGSPRAGAGAVP 650
+P+P + + P Y+P + PP YR + G + P GSP G G +P
Sbjct: 644 APSPGAYKTATPPGYKPGSPP---SFRTGTPPGYRGTSPPAGPGTFKP-GSPTVGPGPLP 699
Query: 651 PLG 659
P G
Sbjct: 700 PAG 702
>AK075032-1|BAC11364.1| 524|Homo sapiens protein ( Homo sapiens
cDNA FLJ90551 fis, clone OVARC1000779, weakly similar to
ZINC FINGER PROTEIN 157. ).
Length = 524
Score = 30.3 bits (65), Expect = 6.6
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 597 RTWWCPSGSPRAGAGAVPPLG 659
R + CP+ + R GA AVPPLG
Sbjct: 405 RPYTCPAAAARPGARAVPPLG 425
>AJ431177-1|CAD24007.1| 440|Homo sapiens WIRE protein protein.
Length = 440
Score = 30.3 bits (65), Expect = 6.6
Identities = 22/62 (35%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Frame = +3
Query: 474 PTPSEWPYS--AVPQYRPQIRS**AAQ*DEPPPPYRSSGSSTGRTWWCPSGSPRAGAGAV 647
P P+ P S A P P + A PPPPYR GS P R AG
Sbjct: 312 PPPARDPPSRGAAPPPPPPVIRNGARDAPPPPPPYRMHGSEPPSRGKPPPPPSRTPAGPP 371
Query: 648 PP 653
PP
Sbjct: 372 PP 373
>AF053356-14|AAC78803.1| 318|Homo sapiens nucleoporin protein.
Length = 318
Score = 30.3 bits (65), Expect = 6.6
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 555 EPPPPYRSSGSSTGRTWWCPSGSPRAGAGAVPPLGS 662
+P P S G+ G T P+ P + A AVPP G+
Sbjct: 214 QPTPAGSSQGTPFGATPLAPASQPNSLADAVPPTGA 249
>AB209345-1|BAD92582.1| 774|Homo sapiens atrophin-1 variant
protein.
Length = 774
Score = 30.3 bits (65), Expect = 6.6
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +3
Query: 471 SPTPSEWPYSAVPQYRPQIRS**AAQ*DEPPPPYRSSGSSTGRTWWCPSGSPRAGAGAVP 650
+P+P + + P Y+P + PP YR + G + P GSP G G +P
Sbjct: 227 APSPGAYKTATPPGYKPGSPP---SFRTGTPPGYRGTSPPAGPGTFKP-GSPTVGPGPLP 282
Query: 651 PLG 659
P G
Sbjct: 283 PAG 285
>AB043786-1|BAB85113.1| 440|Homo sapiens WICH protein.
Length = 440
Score = 30.3 bits (65), Expect = 6.6
Identities = 22/62 (35%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Frame = +3
Query: 474 PTPSEWPYS--AVPQYRPQIRS**AAQ*DEPPPPYRSSGSSTGRTWWCPSGSPRAGAGAV 647
P P+ P S A P P + A PPPPYR GS P R AG
Sbjct: 312 PPPARDPPSRGAAPPPPPPVIRNGARDAPPPPPPYRMHGSEPPSRGKPPPPPSRTPAGPP 371
Query: 648 PP 653
PP
Sbjct: 372 PP 373
>AL662870-8|CAM25687.1| 493|Homo sapiens discoidin domain receptor
family, member 1 protein.
Length = 493
Score = 29.9 bits (64), Expect = 8.7
Identities = 23/65 (35%), Positives = 29/65 (44%)
Frame = +3
Query: 459 CSPTSPTPSEWPYSAVPQYRPQIRS**AAQ*DEPPPPYRSSGSSTGRTWWCPSGSPRAGA 638
CSP PT S WP + VP + R+ PP P G + G T+ P+ P A
Sbjct: 276 CSPIQPTASFWPLTPVPL---EARAPPHPPGPNPPTP---RGVTGGNTYAVPALPPGA-V 328
Query: 639 GAVPP 653
G PP
Sbjct: 329 GDGPP 333
>AL662854-8|CAM24838.1| 493|Homo sapiens discoidin domain receptor
family, member 1 protein.
Length = 493
Score = 29.9 bits (64), Expect = 8.7
Identities = 23/65 (35%), Positives = 29/65 (44%)
Frame = +3
Query: 459 CSPTSPTPSEWPYSAVPQYRPQIRS**AAQ*DEPPPPYRSSGSSTGRTWWCPSGSPRAGA 638
CSP PT S WP + VP + R+ PP P G + G T+ P+ P A
Sbjct: 276 CSPIQPTASFWPLTPVPL---EARAPPHPPGPNPPTP---RGVTGGNTYAVPALPPGA-V 328
Query: 639 GAVPP 653
G PP
Sbjct: 329 GDGPP 333
>AK130776-1|BAC85426.1| 441|Homo sapiens protein ( Homo sapiens
cDNA FLJ27266 fis, clone TMS00356, highly similar to
Epithelial discoidin domain receptor 1 precursor (EC
2.7.1.112). ).
Length = 441
Score = 29.9 bits (64), Expect = 8.7
Identities = 23/65 (35%), Positives = 29/65 (44%)
Frame = +3
Query: 459 CSPTSPTPSEWPYSAVPQYRPQIRS**AAQ*DEPPPPYRSSGSSTGRTWWCPSGSPRAGA 638
CSP PT S WP + VP + R+ PP P G + G T+ P+ P A
Sbjct: 211 CSPIQPTASFWPLTPVPL---EARAPPHPPGPNPPTP---RGVTGGNTYAVPALPPGA-V 263
Query: 639 GAVPP 653
G PP
Sbjct: 264 GDGPP 268
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,107,863
Number of Sequences: 237096
Number of extensions: 1726685
Number of successful extensions: 9865
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 9408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9862
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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