Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5849
         (657 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-1185|AAF52451.1|  253|Drosophila melanogaster CG13773-P...    84   2e-16
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    30   3.2  
AY118479-1|AAM49848.1|  240|Drosophila melanogaster GM16372p pro...    28   9.7  
AE014296-1998|AAF50032.1|  240|Drosophila melanogaster CG7339-PA...    28   9.7  

>AE014134-1185|AAF52451.1|  253|Drosophila melanogaster CG13773-PA
           protein.
          Length = 253

 Score = 83.8 bits (198), Expect = 2e-16
 Identities = 41/126 (32%), Positives = 73/126 (57%), Gaps = 1/126 (0%)
 Frame = +3

Query: 72  IMSKIIKFDLRELKQLANDKNSCLVVKKITQNLALQPWCLGNIKESITNLL-DYKVGKFD 248
           I+ K IKF ++EL+  A+   SC+       +LA+ P+ + N K ++  LL   KVG +D
Sbjct: 4   ILQKYIKFSVKELENYASSPESCVRCITTDMHLAMGPYGMANFKHALHELLIRTKVGFYD 63

Query: 249 KELNGVLVSYKNPCILQNVGTIRNDNADIHFQVQADYFIFQPYIGAKLTGLVNKKCSTHL 428
             L+G+++  KN  +L     +R D+  +H  + AD+++F+P  GA L+G+V      H+
Sbjct: 64  SGLDGIVLGIKNIKVLGQTAGLRADDPTMHLVINADFYVFRPKAGAILSGVVRHISRHHV 123

Query: 429 SVLVHR 446
           S +++R
Sbjct: 124 SAVIYR 129


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 19/59 (32%), Positives = 31/59 (52%)
 Frame = +3

Query: 276   YKNPCILQNVGTIRNDNADIHFQVQADYFIFQPYIGAKLTGLVNKKCSTHLSVLVHRYC 452
             Y+NPC    V   R + A    Q   +Y+   PY G +   ++N  CS+HL+ L +++C
Sbjct: 17964 YQNPCGSNAVCRERGEAASC--QCLPEYY-GNPYEGCRPECVLNSDCSSHLACL-NQHC 18018


>AY118479-1|AAM49848.1|  240|Drosophila melanogaster GM16372p
           protein.
          Length = 240

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 15/53 (28%), Positives = 29/53 (54%)
 Frame = +3

Query: 261 GVLVSYKNPCILQNVGTIRNDNADIHFQVQADYFIFQPYIGAKLTGLVNKKCS 419
           G+ ++ K+   L++   +  D A  H +V   Y +F+P +G  +TG + + CS
Sbjct: 43  GLCIALKDIVSLKDSIILPGDGAS-HTEVLFRYVVFRPMVGTVITGKI-RNCS 93


>AE014296-1998|AAF50032.1|  240|Drosophila melanogaster CG7339-PA
           protein.
          Length = 240

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 15/53 (28%), Positives = 29/53 (54%)
 Frame = +3

Query: 261 GVLVSYKNPCILQNVGTIRNDNADIHFQVQADYFIFQPYIGAKLTGLVNKKCS 419
           G+ ++ K+   L++   +  D A  H +V   Y +F+P +G  +TG + + CS
Sbjct: 43  GLCIALKDIVSLKDSIILPGDGAS-HTEVLFRYVVFRPMVGTVITGKI-RNCS 93


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,508,014
Number of Sequences: 53049
Number of extensions: 461752
Number of successful extensions: 1265
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1264
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)