Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5848
(622 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 59 2e-09
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 56 2e-08
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 46 2e-05
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 40 0.001
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 33 0.16
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 32 0.29
U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical pr... 32 0.38
AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical... 31 0.88
AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical ... 30 1.2
Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical pr... 30 1.5
M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein ( C.ele... 30 1.5
AF098997-2|AAC68722.2| 796|Caenorhabditis elegans Hypothetical ... 29 2.7
U23452-5|AAK31546.1| 304|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical pr... 28 4.7
U29377-8|AAA68716.1| 218|Caenorhabditis elegans Hypothetical pr... 28 4.7
AC024812-3|AAF59551.1| 183|Caenorhabditis elegans Hypothetical ... 28 4.7
U64856-1|AAB04985.2| 429|Caenorhabditis elegans Hypothetical pr... 27 8.2
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 27 8.2
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 27 8.2
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 27 8.2
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 27 8.2
U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical pr... 27 8.2
AL132860-26|CAB60511.2| 700|Caenorhabditis elegans Hypothetical... 27 8.2
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 59.3 bits (137), Expect = 2e-09
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Frame = -3
Query: 548 TRSRPRHVTAGVPQGSALSPLLFSLYINDIPRSPETHLAL--FADDTAIYYSCRKKALLH 375
T S + T GVPQG+ LSPLLF +Y+NDI +A FADDT +Y S K
Sbjct: 66 TLSSRKFATCGVPQGAVLSPLLFGIYVNDISSILPEKVACKQFADDTKLYAS-TPKTESE 124
Query: 374 RRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGR 270
LQ+A + W + ++ +N +K+ V + R
Sbjct: 125 NNLQSALDAVVDWTKGSKLTLNQSKTVHVTVGKRR 159
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 56.0 bits (129), Expect = 2e-08
Identities = 39/138 (28%), Positives = 62/138 (44%)
Frame = -3
Query: 518 GVPQGSALSPLLFSLYINDIPRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQ 339
GVPQGS +SP LF+ Y+ D+P +T L +ADD +I +K ++Q + +
Sbjct: 532 GVPQGSVISPNLFTFYLKDMPTQQDTMLISYADDMSIIARDKKIEKAAEKVQLHIDEIAK 591
Query: 338 WFRKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPK 159
+ ++ + I+ KST +F P P I D PIP
Sbjct: 592 YLKERGMSISAEKSTVTVFSCD-----------PKEHKTKP-----DIYWMDDPIPVINA 635
Query: 158 VKYLGVTLDSRMTFRPHI 105
K LG+TL++ + H+
Sbjct: 636 PKLLGITLNTMTGTKDHV 653
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 46.0 bits (104), Expect = 2e-05
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Frame = -3
Query: 527 VTAGVPQGSALSPLLFSLYIND--IPRSPETHLALFADDTAIYYSCRKKALLHRRLQTAA 354
+++GVPQGS PLLF L+IN+ I +P +++ FADD I+++ +Q +
Sbjct: 877 ISSGVPQGSVSGPLLFILFINNLLIDLAPTINISCFADDVKIFHTD------PTIIQNSI 930
Query: 353 TTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLSI 246
+ W + + + PTKS A+L R N + S+
Sbjct: 931 DIIVSWSKLNELPLAPTKS-ALLALGTRNKNQSYSV 965
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 40.3 bits (90), Expect = 0.001
Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 26/170 (15%)
Frame = -3
Query: 527 VTAGVPQGSALSPLLFSLYINDIPRS--PETHLALFADDTAIYYSCRKKALLHRRLQTAA 354
+++GVP+GS P LF ++IN + S P + FADD +Y L +QT
Sbjct: 53 ISSGVPKGSVSGPFLFLIFINSLLLSVPPSISCSAFADDLKVY--SHSPPL----IQTTI 106
Query: 353 TTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLSI-PLPTRRVNNPAPAVR-------- 201
+ W ++ + K+ A+L K G N L + PL V A R
Sbjct: 107 DLITTWSENNKLPLAVHKA-ALLNKLGFSSNCVLLLAPLINSLVCRLLAASRTGVSTVAH 165
Query: 200 ------------PITMFD-QPIPWAPK--VKYLGVTLDSRMTFRPHIKTV 96
P T++ +P +P + LG+ DS++TF+PHIK +
Sbjct: 166 SKTCLLHLGKKNPKTVYKINNLPISPSNIARDLGILTDSKLTFKPHIKKI 215
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -3
Query: 299 STAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAP 162
ST + PP T P P R+ NP+P+ +P + P P P
Sbjct: 449 STGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 494
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 32.3 bits (70), Expect = 0.29
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -3
Query: 299 STAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAP 162
ST + PP T P P R+ NP+P+ +P + P P P
Sbjct: 456 STGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 501
>U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical protein
M02E1.1a protein.
Length = 1077
Score = 31.9 bits (69), Expect = 0.38
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = -3
Query: 254 LSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRA 84
++ PLP+ P VRP T FD IP+ ++G + T + R RA
Sbjct: 890 MATPLPSFN-GRPPSVVRPRTAFDMNIPYGTDSNFIGAKQFKKNTLSVEMTNARQRA 945
>AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical
protein Y75B8A.13 protein.
Length = 1420
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 281 KRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAP 162
K +PP + +PLP RR + P V P + P P P
Sbjct: 233 KTTKPPQHLIILPLPPRRASPAPPRVIPHVIMQPPRPRPP 272
>AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical
protein Y82E9BR.8 protein.
Length = 390
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +1
Query: 460 ISLIYKLNSNGERAEPCGTPAVT*RGRER 546
ISL S GER +PCGTP G E+
Sbjct: 50 ISLTNMPKSTGERTDPCGTPHTAFLGSEK 78
>Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical
protein B0240.4 protein.
Length = 588
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 239 PTRRVNNPAPAVRPITMFDQPIPW 168
P R V++P +PIT+FDQ + W
Sbjct: 46 PNRTVSSPRVQQKPITIFDQIVDW 69
>Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical protein
F02A9.6 protein.
Length = 1295
Score = 29.9 bits (64), Expect = 1.5
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Frame = -1
Query: 340 SGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPR 161
SG G+ + T + +R S+ +TP A+ SR +TPPP S S SP+ P
Sbjct: 1180 SGHGAKSGRQTVKNIKRAGSR----KTPTSAASSRETNHLTPPPSDG-SFSSPSPHYYPT 1234
Query: 160 RSN----I*ASPSTVG*H--SAPTSRRYATVPPSF*DVSTR 56
++ + SP + H + P + + T PP + D + R
Sbjct: 1235 TTSTPNRMETSPEYMFNHEMAPPVNAMWYTTPPPYQDPNYR 1275
>Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical protein
F02A9.6 protein.
Length = 1295
Score = 29.9 bits (64), Expect = 1.5
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Frame = -1
Query: 340 SGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPR 161
SG G+ + T + +R S+ +TP A+ SR +TPPP S S SP+ P
Sbjct: 1180 SGHGAKSGRQTVKNIKRAGSR----KTPTSAASSRETNHLTPPPSDG-SFSSPSPHYYPT 1234
Query: 160 RSN----I*ASPSTVG*H--SAPTSRRYATVPPSF*DVSTR 56
++ + SP + H + P + + T PP + D + R
Sbjct: 1235 TTSTPNRMETSPEYMFNHEMAPPVNAMWYTTPPPYQDPNYR 1275
>M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein ( C.elegans
glp-1 gene,complete cds. ).
Length = 1295
Score = 29.9 bits (64), Expect = 1.5
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Frame = -1
Query: 340 SGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPR 161
SG G+ + T + +R S+ +TP A+ SR +TPPP S S SP+ P
Sbjct: 1180 SGHGAKSGRQTVKNIKRAGSR----KTPTSAASSRETNHLTPPPSDG-SFSSPSPHYYPT 1234
Query: 160 RSN----I*ASPSTVG*H--SAPTSRRYATVPPSF*DVSTR 56
++ + SP + H + P + + T PP + D + R
Sbjct: 1235 TTSTPNRMETSPEYMFNHEMAPPVNAMWYTTPPPYQDPNYR 1275
>AF098997-2|AAC68722.2| 796|Caenorhabditis elegans Hypothetical
protein T10D4.6 protein.
Length = 796
Score = 29.1 bits (62), Expect = 2.7
Identities = 38/142 (26%), Positives = 55/142 (38%), Gaps = 13/142 (9%)
Frame = -1
Query: 562 SSRRERVPGPVTSQPESRKAPPSPRYYSVCISTIYPGLRRPIWRSSPMTPPSTTRVGRRR 383
S+R P T + S + PSP +C S+++ SP TP S RV R
Sbjct: 502 SARSSPAMEPATEEETSGSSDPSPSTSDLC-SSMHAC-------DSPATPESENRVSEER 553
Query: 382 CFIDDFRPQL----PPWDSGSGSGAST-LTPRKAQRCSSKGVALRTPR*ASLSRLGAS-- 224
P P ++G AS+ +P + SS T + A+ R +S
Sbjct: 554 SESSRSLPPTVAVCPATETGEDPHASSDPSPSTSDLRSSMDADPATEKRATEERSESSRS 613
Query: 223 ------ITPPPPFAQSRCSTSP 176
++ PPP A S CS P
Sbjct: 614 LPPTVDVSSPPPVASSSCSPYP 635
>U23452-5|AAK31546.1| 304|Caenorhabditis elegans Hypothetical
protein R07G3.6 protein.
Length = 304
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = -1
Query: 535 PVTSQPESRKAPPSPRYYSVCISTIYPGLRRPIWRSSPMTPPSTTRVGR 389
P T+ + +P + +S +P LRR +S P PP+TT R
Sbjct: 131 PTTTTTPAPTTTTTPNFLEKSLSMFFPSLRRKP-QSIPTLPPTTTPTPR 178
>Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical
protein F56H6.11 protein.
Length = 663
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 223 LTRLVGRGMLSVVFGGRPLLKSTAVLFVGLMSMRHFRNHCPM 348
LT VG G+L ++ PLL + + ++G +S + H P+
Sbjct: 275 LTATVGTGLLMLLSENNPLLSNKVLTYIGDISYSLYLVHWPI 316
>U29377-8|AAA68716.1| 218|Caenorhabditis elegans Hypothetical
protein K05F1.9 protein.
Length = 218
Score = 28.3 bits (60), Expect = 4.7
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = -1
Query: 535 PVTSQPESRKAPPSPRYYSVCISTIYPGLR-RPIWRSSPMTPPSTTRVGRRRCFIDDFRP 359
P T PE+ K YY +T+ + R +W+++ + G RR FID +P
Sbjct: 87 PATVIPENNKHY-FVVYYIKAANTVKEKIPVRDLWKAAASSE------GTRRVFIDFKKP 139
Query: 358 QLPPWDSGSG 329
+LPP ++ G
Sbjct: 140 ELPPTEAEDG 149
>AC024812-3|AAF59551.1| 183|Caenorhabditis elegans Hypothetical
protein Y54E10BR.5 protein.
Length = 183
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +1
Query: 193 VIGRTAGAGLLTRLVGRGMLSVVFGGRPLLKSTAVLFVGLMSMRHFRN 336
V+GRT G LL + GM++++ P LK + F+GL + H N
Sbjct: 141 VVGRTKG--LLPYV---GMVTIIMNDYPKLKYAVLAFLGLFVLLHKEN 183
>U64856-1|AAB04985.2| 429|Caenorhabditis elegans Hypothetical
protein T25F10.3 protein.
Length = 429
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = -1
Query: 235 LGASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVP 83
+ A I PPPP+A SR + P S A+ TV +A AT P
Sbjct: 331 VAAGIQPPPPYAVSRTARREALPPLPSYEDATKDTVIGAAATVIEMQATTP 381
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 27.5 bits (58), Expect = 8.2
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = -1
Query: 328 SGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFA---QSRCSTSPYRGPRR 158
SGA L QR ++ + +S+S + + + PPPP QS S + Y+
Sbjct: 74 SGAQPLPSVLTQRTTTSSYSAPNYSASSMSGVPSDVAPPPPLPIPNQSSSSAASYQHHHA 133
Query: 157 SNI*ASPST 131
S+I S S+
Sbjct: 134 SSISKSISS 142
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 27.5 bits (58), Expect = 8.2
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = -1
Query: 328 SGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFA---QSRCSTSPYRGPRR 158
SGA L QR ++ + +S+S + + + PPPP QS S + Y+
Sbjct: 74 SGAQPLPSVLTQRTTTSSYSAPNYSASSMSGVPSDVAPPPPLPIPNQSSSSAASYQHHHA 133
Query: 157 SNI*ASPST 131
S+I S S+
Sbjct: 134 SSISKSISS 142
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 27.5 bits (58), Expect = 8.2
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = -1
Query: 328 SGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFA---QSRCSTSPYRGPRR 158
SGA L QR ++ + +S+S + + + PPPP QS S + Y+
Sbjct: 74 SGAQPLPSVLTQRTTTSSYSAPNYSASSMSGVPSDVAPPPPLPIPNQSSSSAASYQHHHA 133
Query: 157 SNI*ASPST 131
S+I S S+
Sbjct: 134 SSISKSISS 142
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 27.5 bits (58), Expect = 8.2
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = -1
Query: 328 SGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFA---QSRCSTSPYRGPRR 158
SGA L QR ++ + +S+S + + + PPPP QS S + Y+
Sbjct: 74 SGAQPLPSVLTQRTTTSSYSAPNYSASSMSGVPSDVAPPPPLPIPNQSSSSAASYQHHHA 133
Query: 157 SNI*ASPST 131
S+I S S+
Sbjct: 134 SSISKSISS 142
>U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical
protein C34E10.8 protein.
Length = 1024
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = -3
Query: 263 NTTLSIPLPTRRVNNPAPAVRPITMFDQP----IPWAPK 159
+ TL+ PLP R PA +RP M P +P+ PK
Sbjct: 369 SNTLTAPLPRRYQGPPAQVLRPPQMGPPPGINQVPYQPK 407
>AL132860-26|CAB60511.2| 700|Caenorhabditis elegans Hypothetical
protein Y56A3A.32 protein.
Length = 700
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 220 LLTRLVGRGMLSVVFGGRPLLKSTAVLFVGLMSMRHFRNHCPMVV 354
+L R VGR M SV+F + ++S A+ V L H P+ +
Sbjct: 1 MLLRAVGRQMTSVIFRQQTAVRSIAMSRVALGGGGHHHEPTPVYI 45
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,205,674
Number of Sequences: 27780
Number of extensions: 407415
Number of successful extensions: 1506
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1503
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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