Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5847
         (617 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70687-1|CAA94616.3|  403|Caenorhabditis elegans Hypothetical pr...    31   0.66 
Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical p...    29   2.7  
Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical p...    29   2.7  
Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical pr...    29   2.7  
M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.       29   2.7  

>Z70687-1|CAA94616.3|  403|Caenorhabditis elegans Hypothetical
           protein T14C1.1 protein.
          Length = 403

 Score = 31.1 bits (67), Expect = 0.66
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = -2

Query: 562 FCQVAKLIKLQK*FLKRLIV*FFTQCIFLFGKLLQFSYFVPHFLKNSSVLFYHQ 401
           F QV    K+++ F ++  V F   C+ +F  L    Y VPHF +   +  YHQ
Sbjct: 173 FVQVCLPEKVRRAFSRKETVHFLATCVVIFSVL----YNVPHFFEGFVIDCYHQ 222


>Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical protein
            ZK524.2e protein.
          Length = 1816

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = -1

Query: 254  YSEHSLDFKVYL--HKQEKPCHKTPENK*IYFKVQTF 150
            +S +  D K+ L  H Q+K C KTPE   +YFKV+ F
Sbjct: 1208 WSMYKNDLKMALEEHAQKKRC-KTPEYMNLYFKVKGF 1243


>Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical protein
            ZK524.2d protein.
          Length = 2155

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = -1

Query: 254  YSEHSLDFKVYL--HKQEKPCHKTPENK*IYFKVQTF 150
            +S +  D K+ L  H Q+K C KTPE   +YFKV+ F
Sbjct: 1547 WSMYKNDLKMALEEHAQKKRC-KTPEYMNLYFKVKGF 1582


>Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical
           protein ZK524.2c protein.
          Length = 1475

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = -1

Query: 254 YSEHSLDFKVYL--HKQEKPCHKTPENK*IYFKVQTF 150
           +S +  D K+ L  H Q+K C KTPE   +YFKV+ F
Sbjct: 867 WSMYKNDLKMALEEHAQKKRC-KTPEYMNLYFKVKGF 902


>Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical protein
            ZK524.2a protein.
          Length = 1813

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = -1

Query: 254  YSEHSLDFKVYL--HKQEKPCHKTPENK*IYFKVQTF 150
            +S +  D K+ L  H Q+K C KTPE   +YFKV+ F
Sbjct: 1205 WSMYKNDLKMALEEHAQKKRC-KTPEYMNLYFKVKGF 1240


>Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical
            protein ZK524.2e protein.
          Length = 1816

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = -1

Query: 254  YSEHSLDFKVYL--HKQEKPCHKTPENK*IYFKVQTF 150
            +S +  D K+ L  H Q+K C KTPE   +YFKV+ F
Sbjct: 1208 WSMYKNDLKMALEEHAQKKRC-KTPEYMNLYFKVKGF 1243


>Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical
            protein ZK524.2d protein.
          Length = 2155

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = -1

Query: 254  YSEHSLDFKVYL--HKQEKPCHKTPENK*IYFKVQTF 150
            +S +  D K+ L  H Q+K C KTPE   +YFKV+ F
Sbjct: 1547 WSMYKNDLKMALEEHAQKKRC-KTPEYMNLYFKVKGF 1582


>Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical protein
            ZK524.2a protein.
          Length = 1813

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = -1

Query: 254  YSEHSLDFKVYL--HKQEKPCHKTPENK*IYFKVQTF 150
            +S +  D K+ L  H Q+K C KTPE   +YFKV+ F
Sbjct: 1205 WSMYKNDLKMALEEHAQKKRC-KTPEYMNLYFKVKGF 1240


>Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical protein
            ZK524.2e protein.
          Length = 1816

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = -1

Query: 254  YSEHSLDFKVYL--HKQEKPCHKTPENK*IYFKVQTF 150
            +S +  D K+ L  H Q+K C KTPE   +YFKV+ F
Sbjct: 1208 WSMYKNDLKMALEEHAQKKRC-KTPEYMNLYFKVKGF 1243


>Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical protein
            ZK524.2d protein.
          Length = 2155

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = -1

Query: 254  YSEHSLDFKVYL--HKQEKPCHKTPENK*IYFKVQTF 150
            +S +  D K+ L  H Q+K C KTPE   +YFKV+ F
Sbjct: 1547 WSMYKNDLKMALEEHAQKKRC-KTPEYMNLYFKVKGF 1582


>Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical
           protein ZK524.2c protein.
          Length = 1475

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = -1

Query: 254 YSEHSLDFKVYL--HKQEKPCHKTPENK*IYFKVQTF 150
           +S +  D K+ L  H Q+K C KTPE   +YFKV+ F
Sbjct: 867 WSMYKNDLKMALEEHAQKKRC-KTPEYMNLYFKVKGF 902


>Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical protein
            ZK524.2a protein.
          Length = 1813

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = -1

Query: 254  YSEHSLDFKVYL--HKQEKPCHKTPENK*IYFKVQTF 150
            +S +  D K+ L  H Q+K C KTPE   +YFKV+ F
Sbjct: 1205 WSMYKNDLKMALEEHAQKKRC-KTPEYMNLYFKVKGF 1240


>M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.
          Length = 1815

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = -1

Query: 254  YSEHSLDFKVYL--HKQEKPCHKTPENK*IYFKVQTF 150
            +S +  D K+ L  H Q+K C KTPE   +YFKV+ F
Sbjct: 1208 WSMYKNDLKMALEEHAQKKRC-KTPEYMNLYFKVKGF 1243


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,070,052
Number of Sequences: 27780
Number of extensions: 258624
Number of successful extensions: 428
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 428
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)