Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5846
(677 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0008 + 13651997-13652072,13652440-13652541,13653138-136531... 122 3e-28
08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107 94 1e-19
09_04_0360 - 16944990-16945202,16945288-16945377,16945525-169457... 84 9e-17
06_01_0830 + 6261629-6261704,6261829-6261974,6262086-6262310,626... 71 6e-13
07_03_1563 - 27746977-27747180,27747280-27747369,27747529-277477... 69 3e-12
05_04_0139 + 18355597-18355696,18356665-18356778,18357118-183572... 64 1e-10
02_05_0782 - 31716860-31717150,31717400-31717612,31718497-317186... 62 4e-10
01_05_0009 - 17101633-17101836,17101948-17102040,17102122-171023... 58 6e-09
05_04_0138 - 18350298-18350579,18350648-18350878,18350977-183512... 49 4e-06
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 29 4.5
05_04_0440 + 21266281-21266400,21267395-21267447,21267542-212676... 29 4.5
02_04_0468 - 23172561-23174201 29 4.5
01_03_0301 - 14785898-14786299,14786785-14787234 29 4.5
08_02_0697 + 20144063-20144341,20144755-20145366 28 6.0
06_01_0568 - 4015749-4015923,4016315-4016433 28 6.0
11_01_0014 + 108647-108816,109704-109803,109891-110018,110232-11... 28 7.9
10_01_0168 - 1883380-1883594,1884572-1888325 28 7.9
06_03_0956 + 26296744-26297382,26297595-26297669,26298147-262983... 28 7.9
>09_04_0008 +
13651997-13652072,13652440-13652541,13653138-13653142,
13653970-13654188,13654686-13654901,13654989-13655078,
13656307-13656507
Length = 302
Score = 122 bits (294), Expect = 3e-28
Identities = 59/135 (43%), Positives = 86/135 (63%)
Frame = +2
Query: 2 DARKLLQAGELRMGTDESTFNMILCSRSYPQLAAIFQEYEYLTGHEIEHAIKSEFSGDIE 181
DA+ L +AGE R+GTDE TF I RS+ +A++ Y ++ +E +KSE SG+ E
Sbjct: 158 DAKDLYKAGEKRLGTDEKTFIRIFTERSWAHMASVASAYHHMYDRSLEKVVKSETSGNFE 217
Query: 182 KALLTIVKVVRNKPLYFAERLHKSMKGLGTNDKQLIRIMVTRCEVDLGDIVEAFQTKYGE 361
ALLTI++ N YFA+ L KSMKG+GT+D LIR++VTR E+D+ I + KY +
Sbjct: 218 LALLTILRCAENPAKYFAKVLRKSMKGMGTDDSTLIRVVVTRTEIDMQYIKAEYYKKYKK 277
Query: 362 TLQSWIEGDCSGHYK 406
+L I + SG+Y+
Sbjct: 278 SLAEAIHSETSGNYR 292
Score = 55.6 bits (128), Expect = 3e-08
Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
Frame = +2
Query: 68 ILCSRSYPQLAAIFQEYEYLTGHEIEHAIKSEFSGDIEKALLTIVKVVRNK--------P 223
I+CSR+ QL + Q Y G +EH I SGD +K LL V + R +
Sbjct: 96 IICSRTPSQLQIMKQTYHAKFGTYLEHDIGQRTSGDHQKLLLAYVGIPRYEGPEVDPTIV 155
Query: 224 LYFAERLHKS-MKGLGTNDKQLIRIMVTRCEVDLGDIVEAFQTKYGETLQSWIEGDCSGH 400
+ A+ L+K+ K LGT++K IRI R + + A+ Y +L+ ++ + SG+
Sbjct: 156 THDAKDLYKAGEKRLGTDEKTFIRIFTERSWAHMASVASAYHHMYDRSLEKVVKSETSGN 215
Query: 401 YK 406
++
Sbjct: 216 FE 217
Score = 34.3 bits (75), Expect = 0.091
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = +2
Query: 11 KLLQAGELRMGTDESTFNMILCSRSYPQLAAIFQEYEYLTGHEIEHAIKSEFSGDIEKAL 190
K+L+ MGTD+ST ++ +R+ + I EY + AI SE SG+ L
Sbjct: 236 KVLRKSMKGMGTDDSTLIRVVVTRTEIDMQYIKAEYYKKYKKSLAEAIHSETSGNYRTFL 295
Query: 191 LTIV 202
L++V
Sbjct: 296 LSLV 299
>08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107
Length = 346
Score = 93.9 bits (223), Expect = 1e-19
Identities = 57/160 (35%), Positives = 83/160 (51%), Gaps = 25/160 (15%)
Frame = +2
Query: 2 DARKLLQAGELRMGTDESTFNMILCSRSYPQLAAIFQEYEYLTGHEIE------------ 145
DAR+L +AGE R+GTDE TF + RS +AA+ Y ++ +E
Sbjct: 176 DARELYRAGERRLGTDERTFIRVFSERSAAHMAAVAAAYHHMYDRSLEKVIYRSCTAAYA 235
Query: 146 -------------HAIKSEFSGDIEKALLTIVKVVRNKPLYFAERLHKSMKGLGTNDKQL 286
A+KSE SG+ LLTI++ + YFA+ LH++MKGLGTND L
Sbjct: 236 LALVFSLSEFNGGRAVKSETSGNFGFGLLTILRCAESPAKYFAKVLHEAMKGLGTNDTTL 295
Query: 287 IRIMVTRCEVDLGDIVEAFQTKYGETLQSWIEGDCSGHYK 406
IR++ TR EVD+ I + Y +L + + SG+Y+
Sbjct: 296 IRVVTTRAEVDMQYIKAEYHRSYKRSLADAVHSETSGNYR 335
Score = 37.1 bits (82), Expect = 0.013
Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 14/134 (10%)
Frame = +2
Query: 44 TDESTFNMILCSRSYPQLAAIFQEYEYLTGHE----IEHAIKSEFSGDIEKALLTIVKVV 211
TD ++CSR+ QL + Q Y G +EH + SGD ++ LL ++
Sbjct: 101 TDMRAATEVVCSRTPSQLLVVRQAYLARFGGGGGGGLEHDVAVRASGDHQRLLLAYLRSP 160
Query: 212 RNK---------PLYFAERLHKS-MKGLGTNDKQLIRIMVTRCEVDLGDIVEAFQTKYGE 361
R + A L+++ + LGT+++ IR+ R + + A+ Y
Sbjct: 161 RYEGPEVVDMAAAARDARELYRAGERRLGTDERTFIRVFSERSAAHMAAVAAAYHHMYDR 220
Query: 362 TLQSWIEGDCSGHY 403
+L+ I C+ Y
Sbjct: 221 SLEKVIYRSCTAAY 234
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/64 (25%), Positives = 32/64 (50%)
Frame = +2
Query: 11 KLLQAGELRMGTDESTFNMILCSRSYPQLAAIFQEYEYLTGHEIEHAIKSEFSGDIEKAL 190
K+L +GT+++T ++ +R+ + I EY + A+ SE SG+ L
Sbjct: 279 KVLHEAMKGLGTNDTTLIRVVTTRAEVDMQYIKAEYHRSYKRSLADAVHSETSGNYRTFL 338
Query: 191 LTIV 202
L+++
Sbjct: 339 LSLI 342
>09_04_0360 -
16944990-16945202,16945288-16945377,16945525-16945746,
16945854-16946081,16946163-16946372
Length = 320
Score = 84.2 bits (199), Expect = 9e-17
Identities = 42/127 (33%), Positives = 73/127 (57%), Gaps = 1/127 (0%)
Frame = +2
Query: 2 DARKLLQAGELRMGT-DESTFNMILCSRSYPQLAAIFQEYEYLTGHEIEHAIKSEFSGDI 178
DAR+L A MG+ DE+ + RS PQL F Y+++ GH+ A+K G+
Sbjct: 171 DARRLYDAKNSGMGSVDEAVILEMFSKRSIPQLRLAFCSYKHIYGHDYTKALKKNGFGEF 230
Query: 179 EKALLTIVKVVRNKPLYFAERLHKSMKGLGTNDKQLIRIMVTRCEVDLGDIVEAFQTKYG 358
E++L +VK + N +YF++ LH+S++ TN + + R ++ +VD+ I F++ YG
Sbjct: 231 EQSLRVVVKCIYNPSMYFSKLLHRSLQCSATNKRLVTRAILGSDDVDMDKIKSVFKSSYG 290
Query: 359 ETLQSWI 379
+ L+ +I
Sbjct: 291 KDLEDFI 297
>06_01_0830 +
6261629-6261704,6261829-6261974,6262086-6262310,
6262910-6263122,6264007-6264300
Length = 317
Score = 71.3 bits (167), Expect = 6e-13
Identities = 39/114 (34%), Positives = 60/114 (52%)
Frame = +2
Query: 68 ILCSRSYPQLAAIFQEYEYLTGHEIEHAIKSEFSGDIEKALLTIVKVVRNKPLYFAERLH 247
IL +RS QL A F Y GH I +K++ + L I++ YF + +
Sbjct: 194 ILTTRSKAQLIATFNRYNDEYGHPINKDLKADPKDEFLSTLRAIIRCFCCPDRYFEKVIR 253
Query: 248 KSMKGLGTNDKQLIRIMVTRCEVDLGDIVEAFQTKYGETLQSWIEGDCSGHYKK 409
++ G+GT++ L RI+ TR EVDL I EA+Q + L+ + GD SG Y++
Sbjct: 254 LAIAGMGTDENSLTRIITTRAEVDLKLITEAYQKRNSVPLERAVAGDTSGDYER 307
Score = 44.4 bits (100), Expect = 9e-05
Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 8/115 (6%)
Frame = +2
Query: 68 ILCSRSYPQLAAIFQEYEYLTGHEIEHAIKSEFSGDIEKALLTIVKVVR------NKPLY 229
I C+R QL A+ Q Y +E + + +GD K L+ ++ R N L
Sbjct: 111 IACARGPAQLFAVRQAYHERFKRSLEEDVAAHATGDFRKLLVPLISAYRYEGPEVNTKLA 170
Query: 230 FAER--LHKSMKGLGTNDKQLIRIMVTRCEVDLGDIVEAFQTKYGETLQSWIEGD 388
+E LH+ ++ D ++IRI+ TR + L + +YG + ++ D
Sbjct: 171 HSEAKILHEKIQHKAYGDDEIIRILTTRSKAQLIATFNRYNDEYGHPINKDLKAD 225
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/64 (29%), Positives = 35/64 (54%)
Frame = +2
Query: 11 KLLQAGELRMGTDESTFNMILCSRSYPQLAAIFQEYEYLTGHEIEHAIKSEFSGDIEKAL 190
K+++ MGTDE++ I+ +R+ L I + Y+ +E A+ + SGD E+ L
Sbjct: 250 KVIRLAIAGMGTDENSLTRIITTRAEVDLKLITEAYQKRNSVPLERAVAGDTSGDYERML 309
Query: 191 LTIV 202
L ++
Sbjct: 310 LALL 313
Score = 34.7 bits (76), Expect = 0.069
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +2
Query: 236 ERLHKSMKGLGTNDKQLIRIMVTRCEVDLGDIVEAFQTKYGETLQSWIEGDCSGHYKK 409
++L K+ +G GTN+ +I I+ R I A+ YGE L I + SG +++
Sbjct: 18 DQLRKAFQGWGTNEALIISILAHRDAAQRRAIRRAYADTYGEELLRSITDEISGDFER 75
>07_03_1563 -
27746977-27747180,27747280-27747369,27747529-27747753,
27748002-27748115,27748218-27748423,27748757-27748832
Length = 304
Score = 69.3 bits (162), Expect = 3e-12
Identities = 40/113 (35%), Positives = 60/113 (53%)
Frame = +2
Query: 68 ILCSRSYPQLAAIFQEYEYLTGHEIEHAIKSEFSGDIEKALLTIVKVVRNKPLYFAERLH 247
I+ +RS QL A FQ Y G +I I S G + L T V + + +FAE +
Sbjct: 181 IVTTRSKSQLRATFQRYREDHGSDIAEDIDSHCIGQFGRMLKTAVWCLTSPEKHFAEVIR 240
Query: 248 KSMKGLGTNDKQLIRIMVTRCEVDLGDIVEAFQTKYGETLQSWIEGDCSGHYK 406
S+ GLGT + L R++V+R E+D+ I E ++ +Y T+ + GD S YK
Sbjct: 241 HSILGLGTYEDMLTRVIVSRAEIDMRHIREEYKVRYKTTVTRDVVGDTSFGYK 293
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/66 (24%), Positives = 32/66 (48%)
Frame = +2
Query: 206 VVRNKPLYFAERLHKSMKGLGTNDKQLIRIMVTRCEVDLGDIVEAFQTKYGETLQSWIEG 385
VVR + AE + K + G + +++RI+ TR + L + ++ +G + I+
Sbjct: 154 VVRMEASQLAEAIKKKKQPRG--EDEVVRIVTTRSKSQLRATFQRYREDHGSDIAEDIDS 211
Query: 386 DCSGHY 403
C G +
Sbjct: 212 HCIGQF 217
>05_04_0139 +
18355597-18355696,18356665-18356778,18357118-18357263,
18357365-18357910,18358397-18358600
Length = 369
Score = 64.1 bits (149), Expect = 1e-10
Identities = 33/112 (29%), Positives = 59/112 (52%)
Frame = +2
Query: 68 ILCSRSYPQLAAIFQEYEYLTGHEIEHAIKSEFSGDIEKALLTIVKVVRNKPLYFAERLH 247
I+ +RS QLA + Y G I+ + + L + + + +FAE +
Sbjct: 246 IVGTRSKAQLAVTLERYRQEHGKGIDEVLDGRRGDQLAAVLKAALWCLTSPEKHFAEVIR 305
Query: 248 KSMKGLGTNDKQLIRIMVTRCEVDLGDIVEAFQTKYGETLQSWIEGDCSGHY 403
S+ GLGT+++ L R +V+R EVD+ + E ++ +Y T+ + + GD SG+Y
Sbjct: 306 TSILGLGTDEEMLTRGIVSRAEVDMEKVKEEYKVRYNTTVTADVRGDTSGYY 357
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +2
Query: 221 PLYFAERLHKSMKGLGTNDKQLIRIMVTRCEVDLGDIVEAFQTKYGETLQSWIEGDCSGH 400
P AE + K+++G GT++ LI I+ R +I A++ Y ETL + + SG
Sbjct: 59 PTEDAESIRKAVQGWGTDENALIEILGHRTAAQRAEIAVAYEGLYDETLLDRLHSELSGD 118
Query: 401 YK 406
++
Sbjct: 119 FR 120
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/64 (23%), Positives = 31/64 (48%)
Frame = +2
Query: 11 KLLQAGELRMGTDESTFNMILCSRSYPQLAAIFQEYEYLTGHEIEHAIKSEFSGDIEKAL 190
++++ L +GTDE + SR+ + + +EY+ + ++ + SG L
Sbjct: 302 EVIRTSILGLGTDEEMLTRGIVSRAEVDMEKVKEEYKVRYNTTVTADVRGDTSGYYMNTL 361
Query: 191 LTIV 202
LT+V
Sbjct: 362 LTLV 365
>02_05_0782 -
31716860-31717150,31717400-31717612,31718497-31718642,
31718742-31718817
Length = 241
Score = 62.1 bits (144), Expect = 4e-10
Identities = 36/113 (31%), Positives = 57/113 (50%)
Frame = +2
Query: 68 ILCSRSYPQLAAIFQEYEYLTGHEIEHAIKSEFSGDIEKALLTIVKVVRNKPLYFAERLH 247
IL +RS QL A F Y GH I +K++ + L I++ YF + +
Sbjct: 119 ILTTRSKAQLLATFNSYNDQFGHPITKDLKADPKDEFLGTLRAIIRCFTCPDRYFEKVIR 178
Query: 248 KSMKGLGTNDKQLIRIMVTRCEVDLGDIVEAFQTKYGETLQSWIEGDCSGHYK 406
++ G+GT++ L RI+ TR EVDL I EA+Q + L+ + D + Y+
Sbjct: 179 LALGGMGTDENSLTRIITTRAEVDLKLIKEAYQKRNSVPLERAVAKDTTRDYE 231
Score = 43.2 bits (97), Expect = 2e-04
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 8/124 (6%)
Frame = +2
Query: 41 GTDESTFNMILCSRSYPQLAAIFQEYEYLTGHEIEHAIKSEFSGDIEKALLTIVKVVR-- 214
GT+E IL R Q AI + Y G E+ A+ E G E L+ +V V R
Sbjct: 28 GTNEKLIISILAHRDAAQRRAIRRAYAEAYGEELLRALNDEIHGKFE-LLVPLVTVYRYD 86
Query: 215 ----NKPLYFAER--LHKSMKGLGTNDKQLIRIMVTRCEVDLGDIVEAFQTKYGETLQSW 376
N L +E LH+ + +D ++IRI+ TR + L ++ ++G +
Sbjct: 87 GPEVNTSLAHSEAKILHEKIHDKAYSDDEIIRILTTRSKAQLLATFNSYNDQFGHPITKD 146
Query: 377 IEGD 388
++ D
Sbjct: 147 LKAD 150
Score = 36.7 bits (81), Expect = 0.017
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +2
Query: 236 ERLHKSMKGLGTNDKQLIRIMVTRCEVDLGDIVEAFQTKYGETLQSWIEGDCSGHYK 406
E+L K+ KG GTN+K +I I+ R I A+ YGE L + + G ++
Sbjct: 18 EQLRKAFKGWGTNEKLIISILAHRDAAQRRAIRRAYAEAYGEELLRALNDEIHGKFE 74
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +2
Query: 38 MGTDESTFNMILCSRSYPQLAAIFQEYEYLTGHEIEHAIKSEFSGDIEKALLTIV 202
MGTDE++ I+ +R+ L I + Y+ +E A+ + + D E LL ++
Sbjct: 184 MGTDENSLTRIITTRAEVDLKLIKEAYQKRNSVPLERAVAKDTTRDYEDILLALL 238
>01_05_0009 -
17101633-17101836,17101948-17102040,17102122-17102334,
17102514-17102651,17102764-17102909,17106264-17106339
Length = 289
Score = 58.0 bits (134), Expect = 6e-09
Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 2/134 (1%)
Frame = +2
Query: 11 KLLQAGELRMGTDESTFNMILCSRSYPQLAAIFQEYEYLTGHEIEHAIK--SEFSGDIEK 184
K+L TD I+ +RS QL A F + G I A++ ++ +G
Sbjct: 146 KILHETVTNGDTDHGELIRIVGTRSRAQLNATFSWFRDERGTSITKALQHGADPTG-YSH 204
Query: 185 ALLTIVKVVRNKPLYFAERLHKSMKGLGTNDKQLIRIMVTRCEVDLGDIVEAFQTKYGET 364
AL T ++ + + YF + L +M GTN+ L R++V E DL I +AFQ +
Sbjct: 205 ALRTALRCISDANKYFVKVLRNAMHKSGTNEDSLTRVIVLHAEKDLKGIKDAFQKRASVA 264
Query: 365 LQSWIEGDCSGHYK 406
L+ I D SG YK
Sbjct: 265 LEKAIGNDTSGDYK 278
Score = 31.5 bits (68), Expect = 0.64
Identities = 17/71 (23%), Positives = 34/71 (47%)
Frame = +2
Query: 197 IVKVVRNKPLYFAERLHKSMKGLGTNDKQLIRIMVTRCEVDLGDIVEAFQTKYGETLQSW 376
+V V P A+ L K+ +G GT+++ +I ++ R I ++ Y E L
Sbjct: 5 VVPPVTPSPAEDADALLKAFQGWGTDEQAVIGVLAHRDATQRKQIRLTYEENYNENLIQR 64
Query: 377 IEGDCSGHYKK 409
++ + SG ++
Sbjct: 65 LQSELSGDLER 75
>05_04_0138 -
18350298-18350579,18350648-18350878,18350977-18351253,
18351307-18351487,18351612-18351651
Length = 336
Score = 48.8 bits (111), Expect = 4e-06
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
Frame = +2
Query: 68 ILCSRSYPQLAAIFQEYEYLTGHEIEHAIKSEFSGDIEKALLTIVKVVRNKPLYFAERLH 247
IL +RS P L F+ Y+ + G IE + E + + +A L + R YF+E +
Sbjct: 217 ILTTRSKPHLVETFKHYKEIHGRHIEEDLGHEET--LREAALCLATPAR----YFSEVVA 270
Query: 248 KSMK-GLGTNDKQ-LIRIMVTRCEVDLGDIVEAFQTKYGETLQSWIEGDCSGHYK 406
++ G + K+ L R+ VTR +VD+ I A+ ++G L+ + G G+Y+
Sbjct: 271 AAVSDGADHHAKEALTRVAVTRADVDMDAIRAAYHEQFGGRLEDAVAGKAHGYYR 325
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 28.7 bits (61), Expect = 4.5
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 11/99 (11%)
Frame = +1
Query: 91 SAGGHLPGVR--ILDRTRDRARHQV*VLGG-------HREGPLDYRESGPQQAAVF--RG 237
S+G HL G I TRDR +LG H P S + + R
Sbjct: 237 SSGRHLSGRNRDISPMTRDRHERSPGILGRFPHDRLRHDRSPSRLEPSPRDRGRHYDNRD 296
Query: 238 ASPQIDEGPRNERQTAHSHNGDPLRGRPGRHRRSLPDEI 354
SP I PR+ + +H + P RG HR + P +
Sbjct: 297 RSPYIS--PRHRMRPSHYRDNTPSRGEMHHHRDNTPSRV 333
>05_04_0440 +
21266281-21266400,21267395-21267447,21267542-21267651,
21268136-21268303,21268595-21268692,21269332-21269458,
21269587-21269693
Length = 260
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = -2
Query: 343 EGFDDVAQVDLATGHHYANELFVVRSEALHRFVETLRE 230
+G +++ V + T H Y ++F+VRSE + R ++RE
Sbjct: 186 KGDEELCSVYVPTNHLYIGDIFLVRSEEIIRPNLSIRE 223
>02_04_0468 - 23172561-23174201
Length = 546
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/65 (26%), Positives = 28/65 (43%)
Frame = -3
Query: 363 VSPYFVWKASTMSPRSTSQRVTIMRMSCLSFVPRPFIDLWRRSAKYSGLLRTTFTIVKRA 184
V+P F+WKA + + +R+ + F R D R + G LR ++ R
Sbjct: 241 VTPPFIWKAKRLLRAGSERRLVEATRAVREFAERAVADR-RNEMRKVGSLRGRCDLLSRL 299
Query: 183 FSMSP 169
S +P
Sbjct: 300 MSSAP 304
>01_03_0301 - 14785898-14786299,14786785-14787234
Length = 283
Score = 28.7 bits (61), Expect = 4.5
Identities = 26/99 (26%), Positives = 41/99 (41%)
Frame = -2
Query: 382 LDPALQCFTVFRLEGFDDVAQVDLATGHHYANELFVVRSEALHRFVETLREIQRLVADHF 203
LDP + FR+E + + A A+E+ + S +L + + AD
Sbjct: 97 LDPVAAAASEFRMEACLSLLALRPAVVRGNASEILALASRSLAASSSSSTTTFK-GADST 155
Query: 202 HDSQEGLLDVPRELRLDGVLDLVSGQVFVLLEDGRQLRV 86
HDS + L D R G + VSG V + + R + V
Sbjct: 156 HDSGDALQDAKALARSTGAVIAVSGAVDYVTDGERVVGV 194
>08_02_0697 + 20144063-20144341,20144755-20145366
Length = 296
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -3
Query: 360 SPYFVWKASTMSPRSTSQRVTIMRMSCLSFVPRPFIDLWRR 238
SP+ +W+ + + ST+ R + S PRP + WRR
Sbjct: 145 SPHDLWRDTLVDAPSTTPTTRAARCTSRSAPPRPDLAGWRR 185
>06_01_0568 - 4015749-4015923,4016315-4016433
Length = 97
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -3
Query: 339 ASTMSPRSTSQRVTIMRMSCLSFVPRPFIDLWRRSA 232
+S + R + I+R+ LS PRPF++ WRR A
Sbjct: 61 SSVFASRGVLLIIIILRVWWLS-QPRPFLETWRRGA 95
>11_01_0014 +
108647-108816,109704-109803,109891-110018,110232-110394,
110491-110603,111080-111118,111319-111402,111486-111534,
111624-111715,111999-112128,112225-112301,112377-113995,
114348-114545,114635-115173
Length = 1166
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -3
Query: 387 SPSIQLCNVSPYFVWKASTMSPRSTSQRV-TIMRMSCLSFV 268
SP + N SP +W ++ STS R T+M+ LS V
Sbjct: 704 SPYVHFPNTSPISLWNGKEINHTSTSDRTSTMMQPGLLSSV 744
>10_01_0168 - 1883380-1883594,1884572-1888325
Length = 1322
Score = 27.9 bits (59), Expect = 7.9
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = -2
Query: 334 DDVAQVDLATGHHYANELFVVRSEALHRFVETLREIQRLVADHFH--DSQEGLLDVP--R 167
D++ V L +H +L + E L L ++RL+ DH + +S + L D+P R
Sbjct: 1127 DNLHSVQLDALNHSLKKLLIFGCEKLCSVSGQLDALKRLIIDHCNKLESLDCLGDLPSLR 1186
Query: 166 ELRLDGVLDLVS 131
LRL+G L S
Sbjct: 1187 ILRLEGCRRLQS 1198
>06_03_0956 +
26296744-26297382,26297595-26297669,26298147-26298341,
26298426-26298559,26298713-26298779,26298985-26299043,
26299204-26299321,26299613-26299726,26299855-26299986,
26300076-26300492,26300904-26300954,26301303-26301373,
26302067-26302151,26302258-26302410,26302522-26302596,
26302755-26302844,26303953-26304000,26304081-26304195,
26305356-26305459,26305582-26305692
Length = 950
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 257 KGLGTNDKQLIRIMVTRCEVDLGDIVEAFQTKYGETLQSWIEGDCS 394
KGL T+DK L + V L + + FQ+ G + +W+ GDC+
Sbjct: 752 KGLITDDKLLYEVSCYATRVTLDALGQMFQSARG--IMAWL-GDCA 794
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,070,765
Number of Sequences: 37544
Number of extensions: 315133
Number of successful extensions: 1003
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -