Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5845
(621 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40942-9|AAC47074.6| 703|Caenorhabditis elegans Synaptogenesis ... 38 0.004
U80438-4|AAB37634.2| 1415|Caenorhabditis elegans Uncoordinated p... 35 0.041
U70618-1|AAB17088.1| 1415|Caenorhabditis elegans unc-40 protein. 35 0.041
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z81545-9|CAB04445.1| 173|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 29 2.7
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 29 2.7
Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical pr... 28 4.7
S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein. 28 4.7
S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein. 28 4.7
AF036698-5|AAB88356.2| 567|Caenorhabditis elegans Uncoordinated... 28 4.7
AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated... 28 4.7
U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon gu... 28 6.2
U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon gu... 28 6.2
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 28 6.2
AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein. 28 6.2
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 28 6.2
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 28 6.2
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 28 6.2
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 28 6.2
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 28 6.2
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 8.2
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 8.2
>U40942-9|AAC47074.6| 703|Caenorhabditis elegans Synaptogenesis
abnormal protein 1 protein.
Length = 703
Score = 38.3 bits (85), Expect = 0.004
Identities = 22/59 (37%), Positives = 27/59 (45%)
Frame = +2
Query: 428 WKNLAVFCVLATTAAFQQQYFRVVPRSLRVQEGSEAVLECAVANLAGQVQWAKDGFALG 604
W L +F L T QQ+ P+ G A+L C V + G VQW KD F LG
Sbjct: 7 WPLLLLF-QLVTCQQLQQRIVEA-PKDTLAAVGETAILTCRVEHQQGPVQWMKDDFGLG 63
>U80438-4|AAB37634.2| 1415|Caenorhabditis elegans Uncoordinated
protein 40 protein.
Length = 1415
Score = 35.1 bits (77), Expect = 0.041
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 407 IKMAGRFWKNLAVFCVLATTAAFQQQYFRVVPRSLRVQEGSEAVLECAVANL-AGQVQWA 583
++ AG+ + + T + F PR V++G E +LEC VA+L QV+W
Sbjct: 220 VEGAGKRRSSQTARLTVTTETVSNELVFITTPRLQVVEQGDEFLLECLVASLIRPQVRWL 279
Query: 584 KD 589
KD
Sbjct: 280 KD 281
>U70618-1|AAB17088.1| 1415|Caenorhabditis elegans unc-40 protein.
Length = 1415
Score = 35.1 bits (77), Expect = 0.041
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 407 IKMAGRFWKNLAVFCVLATTAAFQQQYFRVVPRSLRVQEGSEAVLECAVANL-AGQVQWA 583
++ AG+ + + T + F PR V++G E +LEC VA+L QV+W
Sbjct: 220 VEGAGKRRSSQTARLTVTTETVSNELVFITTPRLQVVEQGDEFLLECLVASLIRPQVRWL 279
Query: 584 KD 589
KD
Sbjct: 280 KD 281
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +1
Query: 457 GHDSSLPATVLQGGSSKPAGSRGLRGGPRVRCSQSSRPGAVGQRWIC 597
GHD A +G + P G G G P QS PG VG++ IC
Sbjct: 237 GHDGQPGAPGPKGPNGNP-GQPGADGNPGAP-GQSGTPGGVGEKGIC 281
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +1
Query: 457 GHDSSLPATVLQGGSSKPAGSRGLRGGPRVRCSQSSRPGAVGQRWIC 597
GHD A +G + P G G G P QS PG VG++ IC
Sbjct: 204 GHDGQPGAPGPKGPNGNP-GQPGADGNPGAP-GQSGTPGGVGEKGIC 248
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +1
Query: 457 GHDSSLPATVLQGGSSKPAGSRGLRGGPRVRCSQSSRPGAVGQRWIC 597
GHD A +G + P G G G P QS PG VG++ IC
Sbjct: 237 GHDGQPGAPGPKGPNGNP-GQPGADGNPGAP-GQSGTPGGVGEKGIC 281
>Z81545-9|CAB04445.1| 173|Caenorhabditis elegans Hypothetical
protein F49H6.12 protein.
Length = 173
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 493 GGSSKPAG-SRGLRGGPRVRCSQSSRPGAVGQR 588
GGS+ A S G GGP VR R G+VG+R
Sbjct: 35 GGSAVGASQSTGQNGGPDVRILSGDRGGSVGER 67
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +2
Query: 503 RSLRVQEGSEAVLECAVANLAGQVQWAKDGFAL 601
R + EG+E V++C + + + + W+K+G L
Sbjct: 4235 RYINGSEGTETVIKCEIESESSEFSWSKNGVPL 4267
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +2
Query: 503 RSLRVQEGSEAVLECAVANLAGQVQWAKDGFAL 601
R + EG+E V++C + + + + W+K+G L
Sbjct: 4235 RYINGSEGTETVIKCEIESESSEFSWSKNGVPL 4267
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +2
Query: 503 RSLRVQEGSEAVLECAVANLAGQVQWAKDGFAL 601
R + EG+E V++C + + + + W+K+G L
Sbjct: 4235 RYINGSEGTETVIKCEIESESSEFSWSKNGVPL 4267
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +2
Query: 503 RSLRVQEGSEAVLECAVANLAGQVQWAKDGFAL 601
R + EG+E V++C + + + + W+K+G L
Sbjct: 4235 RYINGSEGTETVIKCEIESESSEFSWSKNGVPL 4267
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +2
Query: 503 RSLRVQEGSEAVLECAVANLAGQVQWAKDGFAL 601
R + EG+E V++C + + + + W+K+G L
Sbjct: 4235 RYINGSEGTETVIKCEIESESSEFSWSKNGVPL 4267
>Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical
protein W03G11.1b protein.
Length = 279
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 496 GSSKPAGSRGLRGGPRVRCSQSSRPGAVG 582
G+ PAG G +GG V S + PGA G
Sbjct: 183 GADGPAGQLGPQGGSNVAPSPAGEPGAPG 211
>Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical
protein W03G11.1a protein.
Length = 332
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 496 GSSKPAGSRGLRGGPRVRCSQSSRPGAVG 582
G+ PAG G +GG V S + PGA G
Sbjct: 236 GADGPAGQLGPQGGSNVAPSPAGEPGAPG 264
>S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein.
Length = 919
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +2
Query: 470 AFQQQYFRVVPRSLRVQEGSEAVLECAV--ANLAGQVQWAKDG 592
A+ +++F P + RVQEG+ L C ++ ++ W KDG
Sbjct: 107 AYMRKHFLKSPVAQRVQEGTTLQLPCQAPESDPKAELTWYKDG 149
>S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein.
Length = 947
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +2
Query: 470 AFQQQYFRVVPRSLRVQEGSEAVLECAV--ANLAGQVQWAKDG 592
A+ +++F P + RVQEG+ L C ++ ++ W KDG
Sbjct: 135 AYMRKHFLKSPVAQRVQEGTTLQLPCQAPESDPKAELTWYKDG 177
>AF036698-5|AAB88356.2| 567|Caenorhabditis elegans Uncoordinated
protein 5, isoform b protein.
Length = 567
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +2
Query: 470 AFQQQYFRVVPRSLRVQEGSEAVLECAV--ANLAGQVQWAKDG 592
A+ +++F P + RVQEG+ L C ++ ++ W KDG
Sbjct: 107 AYMRKHFLKSPVAQRVQEGTTLQLPCQAPESDPKAELTWYKDG 149
>AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated
protein 5, isoform a protein.
Length = 919
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +2
Query: 470 AFQQQYFRVVPRSLRVQEGSEAVLECAV--ANLAGQVQWAKDG 592
A+ +++F P + RVQEG+ L C ++ ++ W KDG
Sbjct: 107 AYMRKHFLKSPVAQRVQEGTTLQLPCQAPESDPKAELTWYKDG 149
>U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform b protein.
Length = 1273
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 470 AFQQQYFRVVPRSLRVQEGSEAVLECAVANLAGQ--VQWAKD 589
A ++ FRV PR+++ G AVLEC+ + V W KD
Sbjct: 129 AMLREDFRVRPRTVQALGGEMAVLECSPPRGFPEPVVSWRKD 170
>U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform a protein.
Length = 1269
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 470 AFQQQYFRVVPRSLRVQEGSEAVLECAVANLAGQ--VQWAKD 589
A ++ FRV PR+++ G AVLEC+ + V W KD
Sbjct: 129 AMLREDFRVRPRTVQALGGEMAVLECSPPRGFPEPVVSWRKD 170
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 506 SLRVQEGSEAVLECAVANLAGQVQWAKDGFAL 601
+++V+E A EC V+ V+W KDG L
Sbjct: 4026 AIQVKETETAKFECKVSGTKPDVKWFKDGTPL 4057
>AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein.
Length = 1273
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 470 AFQQQYFRVVPRSLRVQEGSEAVLECAVANLAGQ--VQWAKD 589
A ++ FRV PR+++ G AVLEC+ + V W KD
Sbjct: 129 AMLREDFRVRPRTVQALGGEMAVLECSPPRGFPEPVVSWRKD 170
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 506 SLRVQEGSEAVLECAVANLAGQVQWAKDGFAL 601
+++V+E A EC V+ V+W KDG L
Sbjct: 3386 AIQVKETETAKFECKVSGTKPDVKWFKDGTPL 3417
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 506 SLRVQEGSEAVLECAVANLAGQVQWAKDGFAL 601
+++V+E A EC V+ V+W KDG L
Sbjct: 4026 AIQVKETETAKFECKVSGTKPDVKWFKDGTPL 4057
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 506 SLRVQEGSEAVLECAVANLAGQVQWAKDGFAL 601
+++V+E A EC V+ V+W KDG L
Sbjct: 4026 AIQVKETETAKFECKVSGTKPDVKWFKDGTPL 4057
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 506 SLRVQEGSEAVLECAVANLAGQVQWAKDGFAL 601
+++V+E A EC V+ V+W KDG L
Sbjct: 3386 AIQVKETETAKFECKVSGTKPDVKWFKDGTPL 3417
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 506 SLRVQEGSEAVLECAVANLAGQVQWAKDGFAL 601
+++V+E A EC V+ V+W KDG L
Sbjct: 4026 AIQVKETETAKFECKVSGTKPDVKWFKDGTPL 4057
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 509 LRVQEGSEAVLECAVANLAGQVQWAKDGFALGFSFS 616
+ + G E + VA V+W KDG AL S++
Sbjct: 15199 IELTAGKEGEISAQVAETGVSVEWKKDGKALDASYT 15234
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 509 LRVQEGSEAVLECAVANLAGQVQWAKDGFALGFSFS 616
+ + G E + VA V+W KDG AL S++
Sbjct: 15199 IELTAGKEGEISAQVAETGVSVEWKKDGKALDASYT 15234
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,681,442
Number of Sequences: 27780
Number of extensions: 310467
Number of successful extensions: 907
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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