Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5843
         (523 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC125129-1|AAI25130.1|  892|Homo sapiens zinc finger protein 512...    31   1.9  
BC125128-1|AAI25129.1|  892|Homo sapiens zinc finger protein 512...    31   1.9  
AL118506-12|CAC15498.3|  892|Homo sapiens RP4-591C20.6 protein.        31   1.9  
AB033022-1|BAA86510.1|  851|Homo sapiens KIAA1196 protein protein.     31   1.9  

>BC125129-1|AAI25130.1|  892|Homo sapiens zinc finger protein 512B
           protein.
          Length = 892

 Score = 31.5 bits (68), Expect = 1.9
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +3

Query: 387 VTAPYGIAAPYGIAAPYTAYGAYGVA-PYGLGRPRLVNRSRP 509
           ++ P G++ P G++ P T     GV+ P G+ +P  V R  P
Sbjct: 182 ISRPVGVSKPIGVSKPVTIGKPVGVSKPIGISKPVSVGRPMP 223


>BC125128-1|AAI25129.1|  892|Homo sapiens zinc finger protein 512B
           protein.
          Length = 892

 Score = 31.5 bits (68), Expect = 1.9
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +3

Query: 387 VTAPYGIAAPYGIAAPYTAYGAYGVA-PYGLGRPRLVNRSRP 509
           ++ P G++ P G++ P T     GV+ P G+ +P  V R  P
Sbjct: 182 ISRPVGVSKPIGVSKPVTIGKPVGVSKPIGISKPVSVGRPMP 223


>AL118506-12|CAC15498.3|  892|Homo sapiens RP4-591C20.6 protein.
          Length = 892

 Score = 31.5 bits (68), Expect = 1.9
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +3

Query: 387 VTAPYGIAAPYGIAAPYTAYGAYGVA-PYGLGRPRLVNRSRP 509
           ++ P G++ P G++ P T     GV+ P G+ +P  V R  P
Sbjct: 182 ISRPVGVSKPIGVSKPVTIGKPVGVSKPIGISKPVSVGRPMP 223


>AB033022-1|BAA86510.1|  851|Homo sapiens KIAA1196 protein protein.
          Length = 851

 Score = 31.5 bits (68), Expect = 1.9
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +3

Query: 387 VTAPYGIAAPYGIAAPYTAYGAYGVA-PYGLGRPRLVNRSRP 509
           ++ P G++ P G++ P T     GV+ P G+ +P  V R  P
Sbjct: 141 ISRPVGVSKPIGVSKPVTIGKPVGVSKPIGISKPVSVGRPMP 182


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,259,870
Number of Sequences: 237096
Number of extensions: 509058
Number of successful extensions: 2485
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2483
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)