Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5840
         (411 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   3.3  
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       23   5.7  
AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    23   5.7  

>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +3

Query: 27  STTHDFLQPSQINLKGKK 80
           STT D+   SQINLK K+
Sbjct: 340 STTQDYPSISQINLKVKQ 357


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +1

Query: 286 IEDHMTELNNENSFPINLDQYISLLDSSRGGARY 387
           IEDHM E+   +SF +   +  +L+ +S  G RY
Sbjct: 301 IEDHMMEVIASDSFHLQPRKVDTLVSTS--GERY 332


>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 193 CCSFHPSQAPFYQSHLSCVCCFEISVFD 110
           C  +H  +A    +  S +CCF + +FD
Sbjct: 317 CYLYHAWEAILIGAIGSALCCFGMPLFD 344


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 364,647
Number of Sequences: 2352
Number of extensions: 6397
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33349914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)