Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5831
         (634 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74037-2|CAD36492.1|  441|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z74037-1|CAA98492.1|  510|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z69634-10|CAA93457.2|  431|Caenorhabditis elegans Hypothetical p...    28   6.4  
Z68507-8|CAA92831.2|  431|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z81522-6|CAB04230.1|  277|Caenorhabditis elegans Hypothetical pr...    27   8.4  

>Z74037-2|CAD36492.1|  441|Caenorhabditis elegans Hypothetical
           protein F57B7.1b protein.
          Length = 441

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +1

Query: 499 YFPRFNDIAGLLCCICFAIVYWVAIFINRLLILIIKSHF 615
           Y P   DIA    C+ F + YW++  + ++L   + S F
Sbjct: 202 YLPGIADIAKANSCLVFRLSYWISGMVFKVLPCALLSLF 240


>Z74037-1|CAA98492.1|  510|Caenorhabditis elegans Hypothetical
           protein F57B7.1a protein.
          Length = 510

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +1

Query: 499 YFPRFNDIAGLLCCICFAIVYWVAIFINRLLILIIKSHF 615
           Y P   DIA    C+ F + YW++  + ++L   + S F
Sbjct: 202 YLPGIADIAKANSCLVFRLSYWISGMVFKVLPCALLSLF 240


>Z69634-10|CAA93457.2|  431|Caenorhabditis elegans Hypothetical
           protein M18.8 protein.
          Length = 431

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +2

Query: 476 DATLPVLRISPVSMILLVSFVAFVLPLSIG*LFL 577
           D T P++ ++P+S I LV  +A  + +++   FL
Sbjct: 187 DGTEPIILLTPISFIALVFAIAMAIAVALALTFL 220


>Z68507-8|CAA92831.2|  431|Caenorhabditis elegans Hypothetical
           protein M18.8 protein.
          Length = 431

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +2

Query: 476 DATLPVLRISPVSMILLVSFVAFVLPLSIG*LFL 577
           D T P++ ++P+S I LV  +A  + +++   FL
Sbjct: 187 DGTEPIILLTPISFIALVFAIAMAIAVALALTFL 220


>Z81522-6|CAB04230.1|  277|Caenorhabditis elegans Hypothetical
           protein F32B4.5 protein.
          Length = 277

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +3

Query: 177 CGFLVKFERLGLPVVLCREPSIADTIVIIVV*G 275
           C FL++F  +  P++L    +I + ++ IVV G
Sbjct: 213 CSFLLRFSPINFPLLLLMNTAIGEYVLRIVVSG 245


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,833,226
Number of Sequences: 27780
Number of extensions: 237442
Number of successful extensions: 600
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 600
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)