Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5828
         (456 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT016089-1|AAV36974.1| 1341|Drosophila melanogaster LD40982p pro...    29   3.0  
AF145682-1|AAD38657.1| 1239|Drosophila melanogaster BcDNA.LD2333...    29   3.0  
AE014134-2148|AAF53157.2| 1296|Drosophila melanogaster CG7061-PB...    29   3.0  
AE014134-2147|AAF53156.2| 1341|Drosophila melanogaster CG7061-PA...    29   3.0  
BT021340-1|AAX33488.1|  835|Drosophila melanogaster LP23904p pro...    28   5.2  
AY129445-1|AAM76187.1|  855|Drosophila melanogaster LD18893p pro...    28   5.2  
AE014296-2189|AAF49878.1|  835|Drosophila melanogaster CG10967-P...    28   5.2  
BT021279-1|AAX33427.1|  392|Drosophila melanogaster RE40185p pro...    27   9.1  
AE014297-4038|AAF56647.1|  360|Drosophila melanogaster CG14254-P...    27   9.1  

>BT016089-1|AAV36974.1| 1341|Drosophila melanogaster LD40982p
           protein.
          Length = 1341

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 333 RRKAHPLPGRKENPLPRESARSPTLPRCQ 419
           RR   PLP  +E+PLP  +  +P   RC+
Sbjct: 295 RRAPEPLPSPEESPLPVPTKEAPMRIRCR 323


>AF145682-1|AAD38657.1| 1239|Drosophila melanogaster BcDNA.LD23336
           protein.
          Length = 1239

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 333 RRKAHPLPGRKENPLPRESARSPTLPRCQ 419
           RR   PLP  +E+PLP  +  +P   RC+
Sbjct: 193 RRAPEPLPSPEESPLPVPTKEAPMRIRCR 221


>AE014134-2148|AAF53157.2| 1296|Drosophila melanogaster CG7061-PB,
           isoform B protein.
          Length = 1296

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 333 RRKAHPLPGRKENPLPRESARSPTLPRCQ 419
           RR   PLP  +E+PLP  +  +P   RC+
Sbjct: 250 RRAPEPLPSPEESPLPVPTKEAPMRIRCR 278


>AE014134-2147|AAF53156.2| 1341|Drosophila melanogaster CG7061-PA,
           isoform A protein.
          Length = 1341

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 333 RRKAHPLPGRKENPLPRESARSPTLPRCQ 419
           RR   PLP  +E+PLP  +  +P   RC+
Sbjct: 295 RRAPEPLPSPEESPLPVPTKEAPMRIRCR 323


>BT021340-1|AAX33488.1|  835|Drosophila melanogaster LP23904p
           protein.
          Length = 835

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 354 PGRKENPLPRESARSPTLPRCQTCALPSL 440
           PG  ++PL R    SP LP      LP+L
Sbjct: 514 PGHSQSPLRRSGNSSPVLPSAALTKLPTL 542


>AY129445-1|AAM76187.1|  855|Drosophila melanogaster LD18893p
           protein.
          Length = 855

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 354 PGRKENPLPRESARSPTLPRCQTCALPSL 440
           PG  ++PL R    SP LP      LP+L
Sbjct: 534 PGHSQSPLRRSGNSSPVLPSAALTKLPTL 562


>AE014296-2189|AAF49878.1|  835|Drosophila melanogaster CG10967-PA
           protein.
          Length = 835

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 354 PGRKENPLPRESARSPTLPRCQTCALPSL 440
           PG  ++PL R    SP LP      LP+L
Sbjct: 514 PGHSQSPLRRSGNSSPVLPSAALTKLPTL 542


>BT021279-1|AAX33427.1|  392|Drosophila melanogaster RE40185p
           protein.
          Length = 392

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 18/53 (33%), Positives = 28/53 (52%)
 Frame = +3

Query: 282 GIPQNRNCR*ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCALPSL 440
           G+PQ ++ R     +LP   AHP+P +   PLP+E + +   P  QT   P +
Sbjct: 64  GLPQQQSQR-----ALPLN-AHPVPPQIYQPLPQEQSFANFAPPQQTYLPPQM 110


>AE014297-4038|AAF56647.1|  360|Drosophila melanogaster CG14254-PA
           protein.
          Length = 360

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 18/53 (33%), Positives = 28/53 (52%)
 Frame = +3

Query: 282 GIPQNRNCR*ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCALPSL 440
           G+PQ ++ R     +LP   AHP+P +   PLP+E + +   P  QT   P +
Sbjct: 32  GLPQQQSQR-----ALPLN-AHPVPPQIYQPLPQEQSFANFAPPQQTYLPPQM 78


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,457,570
Number of Sequences: 53049
Number of extensions: 200386
Number of successful extensions: 618
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 616
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1497419784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)