Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5824
         (720 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    24   1.3  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              24   1.7  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      24   1.7  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   8.9  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 14/48 (29%), Positives = 28/48 (58%)
 Frame = +1

Query: 139 KRSIYTACIYGT*GVFRSAHD*QPDTNIFIANGTSDMRVKIIV*LTNL 282
           +RSIY++ +     +FR   D Q   +IFI++   + ++  IV ++N+
Sbjct: 378 RRSIYSSLLRYPRSIFRQTDDHQNSPSIFISD--DNQKLTGIVQISNM 423


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 285 FQISQSDDNFNSHITRSIS 229
           F     D NFN H++R I+
Sbjct: 70  FSFVDKDGNFNEHVSREIA 88


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 495 ICLLCIKINKCLIYLNKRNSHNTSYH 572
           +C LC K+ + L   N  N+H + YH
Sbjct: 403 VCALCHKVFRTL---NSLNNHKSIYH 425


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 358 GLKNKLRNIFGLKLLNVI 305
           GLK  +R+IFG  L+ +I
Sbjct: 146 GLKRAIRSIFGAWLIALI 163


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,923
Number of Sequences: 438
Number of extensions: 4777
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)