Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5822
(447 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 271 2e-73
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 271 2e-73
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 271 2e-73
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 246 6e-66
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 165 2e-41
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 165 2e-41
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 147 4e-36
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 138 1e-33
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 76 1e-14
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 76 1e-14
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 76 1e-14
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 72 2e-13
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 72 2e-13
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 55 2e-08
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 55 3e-08
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 45 3e-05
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 44 4e-05
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 37 5e-04
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 39 0.002
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 33 0.13
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 33 0.13
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 0.50
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 0.88
AC090999-3|AAK26147.1| 536|Caenorhabditis elegans Hypothetical ... 30 0.88
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 1.2
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 1.2
U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body prot... 29 1.2
U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body prot... 29 1.2
U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body prot... 29 1.2
J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein ( C.ele... 29 1.2
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 27 6.2
AL032643-6|CAA21657.1| 538|Caenorhabditis elegans Hypothetical ... 27 6.2
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 27 6.2
Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical pr... 27 8.2
U15129-1|AAB60240.1| 225|Caenorhabditis elegans protein-L-isoas... 27 8.2
U09669-1|AAA82166.1| 225|Caenorhabditis elegans protein-L-isoas... 27 8.2
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 27 8.2
AF022968-2|AAB69887.1| 225|Caenorhabditis elegans Protein carbo... 27 8.2
AF022968-1|ABR92613.1| 219|Caenorhabditis elegans Protein carbo... 27 8.2
AC006729-2|AAM15613.1| 165|Caenorhabditis elegans Hypothetical ... 27 8.2
AC006729-1|AAK93861.1| 319|Caenorhabditis elegans Hypothetical ... 27 8.2
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 271 bits (664), Expect = 2e-73
Identities = 124/133 (93%), Positives = 130/133 (97%)
Frame = +2
Query: 47 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 226
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 227 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVATGT 406
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 407 GQFQAGITDNGQT 445
G+F+AGI+ NGQT
Sbjct: 121 GEFEAGISKNGQT 133
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 271 bits (664), Expect = 2e-73
Identities = 124/133 (93%), Positives = 130/133 (97%)
Frame = +2
Query: 47 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 226
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 227 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVATGT 406
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 407 GQFQAGITDNGQT 445
G+F+AGI+ NGQT
Sbjct: 121 GEFEAGISKNGQT 133
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 271 bits (664), Expect = 2e-73
Identities = 124/133 (93%), Positives = 130/133 (97%)
Frame = +2
Query: 47 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 226
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 227 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVATGT 406
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 407 GQFQAGITDNGQT 445
G+F+AGI+ NGQT
Sbjct: 121 GEFEAGISKNGQT 133
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 246 bits (602), Expect = 6e-66
Identities = 113/117 (96%), Positives = 116/117 (99%)
Frame = +2
Query: 47 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 226
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 227 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 397
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 165 bits (400), Expect = 2e-41
Identities = 73/130 (56%), Positives = 96/130 (73%)
Frame = +2
Query: 56 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 235
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 236 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVATGTGQF 415
+ ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V TG+F
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 286
Query: 416 QAGITDNGQT 445
+ G + GQT
Sbjct: 287 ETGFENGGQT 296
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 165 bits (400), Expect = 2e-41
Identities = 73/130 (56%), Positives = 96/130 (73%)
Frame = +2
Query: 56 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 235
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 236 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVATGTGQF 415
+ ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V TG+F
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 304
Query: 416 QAGITDNGQT 445
+ G + GQT
Sbjct: 305 ETGFENGGQT 314
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 147 bits (356), Expect = 4e-36
Identities = 64/132 (48%), Positives = 92/132 (69%)
Frame = +2
Query: 50 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 229
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 230 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVATGTG 409
ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++ G
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRG 223
Query: 410 QFQAGITDNGQT 445
+F+ G GQT
Sbjct: 224 EFETGFDRGGQT 235
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 138 bits (335), Expect = 1e-33
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +2
Query: 47 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 226
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 227 DKLKAER 247
DKLK +
Sbjct: 61 DKLKVTK 67
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 75.8 bits (178), Expect = 1e-14
Identities = 47/131 (35%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
Frame = +2
Query: 20 HIAQP*STKMGK-EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMG 196
H+A P + K +K H+N+ IGHVD GK+T T + K+E
Sbjct: 33 HLAVPGGKAVFKRDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED------ 86
Query: 197 KGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAD 376
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q +
Sbjct: 87 ---------IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQME 137
Query: 377 CAVLIVATGTG 409
A+L+VA G
Sbjct: 138 GAILVVAATDG 148
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 75.8 bits (178), Expect = 1e-14
Identities = 47/131 (35%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
Frame = +2
Query: 20 HIAQP*STKMGK-EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMG 196
H+A P + K +K H+N+ IGHVD GK+T T + K+E
Sbjct: 34 HLAVPGGKAVFKRDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED------ 87
Query: 197 KGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAD 376
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q +
Sbjct: 88 ---------IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQME 138
Query: 377 CAVLIVATGTG 409
A+L+VA G
Sbjct: 139 GAILVVAATDG 149
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 75.8 bits (178), Expect = 1e-14
Identities = 47/131 (35%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
Frame = +2
Query: 20 HIAQP*STKMGK-EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMG 196
H+A P + K +K H+N+ IGHVD GK+T T + K+E
Sbjct: 34 HLAVPGGKAVFKRDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED------ 87
Query: 197 KGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAD 376
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q +
Sbjct: 88 ---------IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQME 138
Query: 377 CAVLIVATGTG 409
A+L+VA G
Sbjct: 139 GAILVVAATDG 149
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 72.1 bits (169), Expect = 2e-13
Identities = 47/126 (37%), Positives = 67/126 (53%), Gaps = 2/126 (1%)
Frame = +2
Query: 38 STKMGKEKTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFK 211
+T K ++N+ IGH+D GK+T T + + G K KF++
Sbjct: 36 ATAAATPKINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE----------- 82
Query: 212 YAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 391
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL+
Sbjct: 83 ----IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLV 138
Query: 392 VATGTG 409
+A G
Sbjct: 139 IAATDG 144
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 72.1 bits (169), Expect = 2e-13
Identities = 47/126 (37%), Positives = 67/126 (53%), Gaps = 2/126 (1%)
Frame = +2
Query: 38 STKMGKEKTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFK 211
+T K ++N+ IGH+D GK+T T + + G K KF++
Sbjct: 36 ATAAATPKINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE----------- 82
Query: 212 YAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 391
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL+
Sbjct: 83 ----IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLV 138
Query: 392 VATGTG 409
+A G
Sbjct: 139 IAATDG 144
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 55.6 bits (128), Expect = 2e-08
Identities = 39/117 (33%), Positives = 55/117 (47%)
Frame = +2
Query: 71 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 250
NI + H+DSGK+T T ++Y G ID E+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 251 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVATGTGQFQA 421
RGITI A + + IID PGH DF + D AVL++ G G Q+
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVLC-GVGGVQS 151
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 55.2 bits (127), Expect = 2e-08
Identities = 36/90 (40%), Positives = 46/90 (51%)
Frame = +2
Query: 71 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 250
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 251 RGITIDIALWKFETSKYYVTIIDAPGHRDF 340
RGIT+ A + + + +ID PGH DF
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDF 103
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 54.8 bits (126), Expect = 3e-08
Identities = 36/113 (31%), Positives = 51/113 (45%)
Frame = +2
Query: 71 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 250
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 251 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVATGTG 409
RGIT+ Y + +ID PGH DF + + D +L+VA G
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG 138
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 44.8 bits (101), Expect = 3e-05
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Frame = +2
Query: 47 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 199
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 200 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 367
+ + L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALG 132
Query: 368 QADCAVLIVATGTG 409
D A+++V +G
Sbjct: 133 VTDGALVVVDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 44.4 bits (100), Expect = 4e-05
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Frame = +2
Query: 47 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 199
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 200 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 367
+ + L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALR 132
Query: 368 QADCAVLIVATGTG 409
D A+++V +G
Sbjct: 133 VTDGALVVVDCVSG 146
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 36.7 bits (81), Expect(2) = 5e-04
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +2
Query: 194 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 370
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 371 ADCAVLIVATGTG 409
AD VL+VA G
Sbjct: 228 ADIVVLVVAADDG 240
Score = 23.0 bits (47), Expect(2) = 5e-04
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2
Query: 74 IVVIGHVDSGKST 112
+ ++GHVD GK+T
Sbjct: 159 VTIMGHVDHGKTT 171
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 38.7 bits (86), Expect = 0.002
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +2
Query: 53 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 229
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 230 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 394
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 38.7 bits (86), Expect = 0.002
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +2
Query: 53 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 229
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 230 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 394
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 32.7 bits (71), Expect = 0.13
Identities = 27/113 (23%), Positives = 46/113 (40%)
Frame = +2
Query: 71 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 250
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 251 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVATGTG 409
+ + I + Y + IID PGH +F M AD V++V G
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 32.7 bits (71), Expect = 0.13
Identities = 27/113 (23%), Positives = 46/113 (40%)
Frame = +2
Query: 71 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 250
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 251 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVATGTG 409
+ + I + Y + IID PGH +F M AD V++V G
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 0.50
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 302 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 397
+V+ +D PGH + M+ G + D A L+VA
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 0.88
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 311 IIDAPGHRDFIKNMITGTSQADCAVLIV 394
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>AC090999-3|AAK26147.1| 536|Caenorhabditis elegans Hypothetical
protein Y82E9BR.7 protein.
Length = 536
Score = 29.9 bits (64), Expect = 0.88
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -2
Query: 206 RSPCPSLELLSQTSRLYVYQ 147
+ PCPSLEL S T+R Y+ Q
Sbjct: 378 KCPCPSLELSSSTARYYLRQ 397
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 1.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 149 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 250
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 1.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 149 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 250
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body protein
1, isoform b protein.
Length = 369
Score = 29.5 bits (63), Expect = 1.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 394 HDQYCAISLGSTRDHVLNEISMTGSINNG 308
HDQY A + T DH+LN + G G
Sbjct: 62 HDQYAAQNWRGTNDHLLNSVRAVGDAITG 90
>U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body protein
1, isoform a protein.
Length = 1010
Score = 29.5 bits (63), Expect = 1.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 394 HDQYCAISLGSTRDHVLNEISMTGSINNG 308
HDQY A + T DH+LN + G G
Sbjct: 703 HDQYAAQNWRGTNDHLLNSVRAVGDAITG 731
>U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body protein
1, isoform c protein.
Length = 999
Score = 29.5 bits (63), Expect = 1.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 394 HDQYCAISLGSTRDHVLNEISMTGSINNG 308
HDQY A + T DH+LN + G G
Sbjct: 703 HDQYAAQNWRGTNDHLLNSVRAVGDAITG 731
>J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein (
C.elegans vinculin (deb-1) gene, complete cds. ).
Length = 1010
Score = 29.5 bits (63), Expect = 1.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 394 HDQYCAISLGSTRDHVLNEISMTGSINNG 308
HDQY A + T DH+LN + G G
Sbjct: 703 HDQYAAQNWRGTNDHLLNSVRAVGDAITG 731
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 29.1 bits (62), Expect = 1.5
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 1/115 (0%)
Frame = +2
Query: 68 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 247
+N+ ++GHVDSGK+T T + E+G S A +
Sbjct: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHA-TSTTTDG 53
Query: 248 ERGITIDIALWKFET-SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVATGTG 409
R T+D+ + S + +ID PGH I+ ++ ++ D A++I+ G
Sbjct: 54 IRRNTLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAG 108
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 2.0
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 68 INIVVIGHVDSGKSTTT 118
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 27.9 bits (59), Expect = 3.6
Identities = 36/122 (29%), Positives = 50/122 (40%), Gaps = 8/122 (6%)
Frame = +2
Query: 68 INIVVIGHVDSGKSTTTGHLIYKC--GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 241
+ + V+G D GKST G L C G K I F + E+ G K + V + +
Sbjct: 169 VRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFPHEVRTG--KTSSVCNDVIG 225
Query: 242 ERERGITIDIALWKF----ETSKYYVTIIDAPGHRDFIKNMITGTS--QADCAVLIVATG 403
RG ++ A E S VT+ID G + K I G + A L+VA
Sbjct: 226 FDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHGLTGYTPHFACLVVAAD 285
Query: 404 TG 409
G
Sbjct: 286 RG 287
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = +2
Query: 305 VTIIDAPGHRDFI--KNMITGTSQA 373
V IID+ G RDFI KN+ GT+ A
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGTADA 97
>AL032643-6|CAA21657.1| 538|Caenorhabditis elegans Hypothetical
protein Y54E5A.4 protein.
Length = 538
Score = 27.1 bits (57), Expect = 6.2
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 246 ANAVSPLT*LSGSLKPANTTSP 311
A +P T L GS KPA TT+P
Sbjct: 499 ATTTTPTTSLFGSTKPATTTTP 520
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 27.1 bits (57), Expect = 6.2
Identities = 33/130 (25%), Positives = 52/130 (40%), Gaps = 11/130 (8%)
Frame = +2
Query: 53 KEKTHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKRTIEKFEKEAQEMGKGSFKYAWV 223
K+ + V+G+VD+GKST G L + G RT K E G+ S +
Sbjct: 136 KDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAARTKLFRHKHEFESGRTSSVGNDI 195
Query: 224 L------DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS--QADC 379
L + + +D + +K VT ID GH ++K I G + D
Sbjct: 196 LGFDVHGNIVNKPDPHNHNLDWVQIGSDCAK-LVTFIDLAGHEKYLKTTIFGMTGHMPDY 254
Query: 380 AVLIVATGTG 409
+L++ G
Sbjct: 255 TMLMIGANMG 264
>Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical
protein C38D4.8 protein.
Length = 190
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 38 STKMGKEKTHINIVVIGHVDSGKSTTTGHL 127
S+ G K +NIVV+G +SGK+T L
Sbjct: 8 SSLFGLGKKDVNIVVVGLDNSGKTTILNQL 37
>U15129-1|AAB60240.1| 225|Caenorhabditis elegans
protein-L-isoaspartate (D-aspartate)O-methyltransferase
protein.
Length = 225
Score = 26.6 bits (56), Expect = 8.2
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +1
Query: 193 GQGLLQVCLGIGQAKGGTRTRYHH*HSSLEV*NQQILRHH 312
G G L VC+ + + GT H +E+ + I +HH
Sbjct: 88 GSGYLTVCMAMMVGRNGTVVGIEHMPQLVELSEKNIRKHH 127
>U09669-1|AAA82166.1| 225|Caenorhabditis elegans
protein-L-isoaspartate (D-aspartate)O-methyltransferase
protein.
Length = 225
Score = 26.6 bits (56), Expect = 8.2
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +1
Query: 193 GQGLLQVCLGIGQAKGGTRTRYHH*HSSLEV*NQQILRHH 312
G G L VC+ + + GT H +E+ + I +HH
Sbjct: 88 GSGYLTVCMAMMVGRNGTVVGIEHMPQLVELSEKNIRKHH 127
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 26.6 bits (56), Expect = 8.2
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 53 KEKTHINIVVIGHVDSGKSTTTGHLIY 133
K+ + V+G+VD+GKST G L +
Sbjct: 136 KDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF022968-2|AAB69887.1| 225|Caenorhabditis elegans Protein
carboxymethyltransferaseprotein 1, isoform a protein.
Length = 225
Score = 26.6 bits (56), Expect = 8.2
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +1
Query: 193 GQGLLQVCLGIGQAKGGTRTRYHH*HSSLEV*NQQILRHH 312
G G L VC+ + + GT H +E+ + I +HH
Sbjct: 88 GSGYLTVCMAMMVGRNGTVVGIEHMPQLVELSEKNIRKHH 127
>AF022968-1|ABR92613.1| 219|Caenorhabditis elegans Protein
carboxymethyltransferaseprotein 1, isoform b protein.
Length = 219
Score = 26.6 bits (56), Expect = 8.2
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +1
Query: 193 GQGLLQVCLGIGQAKGGTRTRYHH*HSSLEV*NQQILRHH 312
G G L VC+ + + GT H +E+ + I +HH
Sbjct: 82 GSGYLTVCMAMMVGRNGTVVGIEHMPQLVELSEKNIRKHH 121
>AC006729-2|AAM15613.1| 165|Caenorhabditis elegans Hypothetical
protein Y24D9A.8b protein.
Length = 165
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 102 ESPLLPAISSTSAAALINVQSRSLRKKLKRWARAPSSM 215
E+ L P + STS A +++ S+ +K RWA +M
Sbjct: 101 ETELAPVVLSTSHAKTLDLPKVSIDEKAFRWALNEDAM 138
>AC006729-1|AAK93861.1| 319|Caenorhabditis elegans Hypothetical
protein Y24D9A.8a protein.
Length = 319
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 102 ESPLLPAISSTSAAALINVQSRSLRKKLKRWARAPSSM 215
E+ L P + STS A +++ S+ +K RWA +M
Sbjct: 255 ETELAPVVLSTSHAKTLDLPKVSIDEKAFRWALNEDAM 292
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,065,058
Number of Sequences: 27780
Number of extensions: 230305
Number of successful extensions: 775
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 777938954
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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