Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5821
         (305 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_01_0079 - 1159963-1160211,1160303-1160509,1160631-1160801,116...    41   2e-04
04_04_0435 - 25170348-25170593,25170989-25171189,25171580-251717...    39   7e-04
08_02_0163 + 13470178-13470335,13470635-13470656,13470885-134710...    39   9e-04
03_02_0555 + 9431451-9431688,9432685-9432803,9432886-9433079,943...    29   0.55 

>09_01_0079 -
           1159963-1160211,1160303-1160509,1160631-1160801,
           1161732-1161869,1162184-1162273,1162354-1162431,
           1162510-1163166,1163245-1163363,1164305-1164584
          Length = 662

 Score = 40.7 bits (91), Expect = 2e-04
 Identities = 19/30 (63%), Positives = 25/30 (83%)
 Frame = +1

Query: 1   LLEIDNSELLHMLEHAESLKAKVDEAVAVL 90
           LLE+D +E+LH+LE  E+LKAKV EA+ VL
Sbjct: 605 LLEMDQTEVLHLLESPEALKAKVAEAMEVL 634


>04_04_0435 -
           25170348-25170593,25170989-25171189,25171580-25171756,
           25172284-25172418,25173131-25173262,25173292-25173369,
           25173452-25174108,25174210-25174328,25175897-25176173
          Length = 673

 Score = 39.1 bits (87), Expect = 7e-04
 Identities = 18/30 (60%), Positives = 25/30 (83%)
 Frame = +1

Query: 1   LLEIDNSELLHMLEHAESLKAKVDEAVAVL 90
           LLE+D +E+LH+LE  E+LK+KV EA+ VL
Sbjct: 617 LLEMDQTEVLHLLESPEALKSKVAEAMDVL 646


>08_02_0163 +
           13470178-13470335,13470635-13470656,13470885-13471055,
           13471157-13471363,13471458-13471700
          Length = 266

 Score = 38.7 bits (86), Expect = 9e-04
 Identities = 17/30 (56%), Positives = 25/30 (83%)
 Frame = +1

Query: 1   LLEIDNSELLHMLEHAESLKAKVDEAVAVL 90
           LLE+D +E+LH++E  ++LKAKV EA+ VL
Sbjct: 211 LLEMDQTEVLHLIESPDALKAKVAEAMEVL 240


>03_02_0555 +
           9431451-9431688,9432685-9432803,9432886-9433079,
           9433174-9433430,9433544-9433650,9433715-9433888,
           9434359-9434490,9434776-9434955,9435062-9435265
          Length = 534

 Score = 29.5 bits (63), Expect = 0.55
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +1

Query: 1   LLEIDNSELLHMLEHAESLKAKVDEAVAVL 90
           LLE+ NSE++ +L  +  L AK++E V +L
Sbjct: 478 LLELGNSEVVMLLYSSNMLSAKIEECVKLL 507


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,097,026
Number of Sequences: 37544
Number of extensions: 49982
Number of successful extensions: 75
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 363831720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)