Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5817
         (619 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-450|AAF47642.2| 1932|Drosophila melanogaster CG13800-PA...    30   2.2  
BT023952-1|ABB36456.1|  707|Drosophila melanogaster GH06117p pro...    29   6.6  
AE014296-1244|AAN12060.1|  691|Drosophila melanogaster CG8588-PD...    29   6.6  
AE014296-1243|AAN12059.1|  677|Drosophila melanogaster CG8588-PC...    29   6.6  
AE014296-1242|AAN12058.1|  666|Drosophila melanogaster CG8588-PB...    29   6.6  
AE014296-1241|AAF50572.1|  652|Drosophila melanogaster CG8588-PA...    29   6.6  

>AE014296-450|AAF47642.2| 1932|Drosophila melanogaster CG13800-PA
            protein.
          Length = 1932

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 21/78 (26%), Positives = 31/78 (39%)
 Frame = -1

Query: 532  SNTSQREFGYEQSTAMEAVEPNSKITNTERDIAAEYAEAKRRGPLNIPPLLNHNQIQDSE 353
            S TS       QST +     ++  +NT         E+K   P   PP L    + D  
Sbjct: 1249 STTSYEVQSTPQSTTISTNTMSTSQSNTISSTTNPSVESKPSAPSVSPPPLQLTPVGDRR 1308

Query: 352  GDSREDATNGNTTSESQQ 299
            G +RE   + ++TS   Q
Sbjct: 1309 GRNRERGASCSSTSSPSQ 1326


>BT023952-1|ABB36456.1|  707|Drosophila melanogaster GH06117p
           protein.
          Length = 707

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
 Frame = -1

Query: 469 NSKITNTERDIAAEYAEAKRRGPLNIPPLLNHNQIQDSEGDSRE---DATNGNTTSESQQ 299
           N ++T T R++   +AE+       I  LL+H Q     G   +   D+    T +E+++
Sbjct: 7   NHEVTRTAREVQQNFAESLGYAEEIIWDLLSHEQHDVLRGKLCQLIRDSPEPKTATETEK 66

Query: 298 KRKISIDI 275
            RKI + +
Sbjct: 67  DRKIRLKV 74


>AE014296-1244|AAN12060.1|  691|Drosophila melanogaster CG8588-PD,
           isoform D protein.
          Length = 691

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
 Frame = -1

Query: 469 NSKITNTERDIAAEYAEAKRRGPLNIPPLLNHNQIQDSEGDSRE---DATNGNTTSESQQ 299
           N ++T T R++   +AE+       I  LL+H Q     G   +   D+    T +E+++
Sbjct: 7   NHEVTRTAREVQQNFAESLGYAEEIIWDLLSHEQHDVLRGKLCQLIRDSPEPKTATETEK 66

Query: 298 KRKISIDI 275
            RKI + +
Sbjct: 67  DRKIRLKV 74


>AE014296-1243|AAN12059.1|  677|Drosophila melanogaster CG8588-PC,
           isoform C protein.
          Length = 677

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
 Frame = -1

Query: 469 NSKITNTERDIAAEYAEAKRRGPLNIPPLLNHNQIQDSEGDSRE---DATNGNTTSESQQ 299
           N ++T T R++   +AE+       I  LL+H Q     G   +   D+    T +E+++
Sbjct: 7   NHEVTRTAREVQQNFAESLGYAEEIIWDLLSHEQHDVLRGKLCQLIRDSPEPKTATETEK 66

Query: 298 KRKISIDI 275
            RKI + +
Sbjct: 67  DRKIRLKV 74


>AE014296-1242|AAN12058.1|  666|Drosophila melanogaster CG8588-PB,
           isoform B protein.
          Length = 666

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
 Frame = -1

Query: 469 NSKITNTERDIAAEYAEAKRRGPLNIPPLLNHNQIQDSEGDSRE---DATNGNTTSESQQ 299
           N ++T T R++   +AE+       I  LL+H Q     G   +   D+    T +E+++
Sbjct: 7   NHEVTRTAREVQQNFAESLGYAEEIIWDLLSHEQHDVLRGKLCQLIRDSPEPKTATETEK 66

Query: 298 KRKISIDI 275
            RKI + +
Sbjct: 67  DRKIRLKV 74


>AE014296-1241|AAF50572.1|  652|Drosophila melanogaster CG8588-PA,
           isoform A protein.
          Length = 652

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
 Frame = -1

Query: 469 NSKITNTERDIAAEYAEAKRRGPLNIPPLLNHNQIQDSEGDSRE---DATNGNTTSESQQ 299
           N ++T T R++   +AE+       I  LL+H Q     G   +   D+    T +E+++
Sbjct: 7   NHEVTRTAREVQQNFAESLGYAEEIIWDLLSHEQHDVLRGKLCQLIRDSPEPKTATETEK 66

Query: 298 KRKISIDI 275
            RKI + +
Sbjct: 67  DRKIRLKV 74


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,438,254
Number of Sequences: 53049
Number of extensions: 351007
Number of successful extensions: 1464
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1464
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)