Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5813
(671 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0585 - 26386248-26386271,26386510-26386699,26387363-263874... 33 0.21
07_01_1167 + 11030200-11031165,11031273-11031407,11031509-11031874 33 0.27
09_04_0383 + 17141534-17142046 31 0.63
04_04_0444 + 25270620-25273001 31 0.63
04_03_0916 + 20794240-20794246,20794585-20796545 31 0.63
05_01_0463 - 3666626-3666933,3667060-3667258,3667388-3667629,366... 31 0.84
04_03_0913 + 20777859-20780309 31 1.1
04_03_0922 + 20834195-20836603 30 1.5
04_03_0920 + 20826876-20829293 30 1.5
04_03_0914 + 20788103-20789642,20790036-20790529 30 1.5
07_01_0162 + 1138420-1138640,1138788-1138830,1139449-1140971,114... 30 1.9
04_03_0443 + 15999984-16000895,16002402-16003025 29 2.6
02_05_0989 - 33343233-33344417 29 2.6
02_01_0483 - 3467813-3467873,3468072-3468154,3468505-3468579,346... 29 2.6
06_03_0924 - 25976629-25976979,25977471-25978424,25978512-259785... 28 5.9
06_03_0478 - 21259376-21259465,21259862-21259924,21260025-212600... 28 5.9
01_06_1015 + 33819203-33821827 28 5.9
01_06_0716 - 31425189-31426460 28 5.9
10_08_0911 - 21499196-21499236,21499368-21499488,21499665-214997... 28 7.8
06_02_0306 + 14115751-14116450,14116882-14117691,14118957-14119141 28 7.8
04_03_0331 + 14510848-14511124,14511139-14511528,14511708-145119... 28 7.8
01_07_0061 + 40818077-40818241,40818494-40818716,40819015-408192... 28 7.8
01_06_0572 - 30337572-30338107,30338209-30338422,30338505-303388... 28 7.8
01_03_0289 - 14725832-14726114,14726216-14726298,14726432-147265... 28 7.8
>04_04_0585 -
26386248-26386271,26386510-26386699,26387363-26387463,
26387554-26387685,26387759-26387857,26387956-26388127,
26388217-26388512,26388601-26388726,26388848-26389062,
26389154-26389225,26389299-26389368,26389441-26389517,
26389605-26389923,26390034-26390225,26390321-26390551,
26390585-26390950,26392251-26392313,26392394-26392456,
26392544-26392642,26393497-26393523,26394299-26394358,
26395230-26396147,26396243-26397268
Length = 1645
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -3
Query: 225 RGQGSQQIEDDCIREVDAARESRPSVMRRTTQR 127
RG G ++DDC E A SRPS RRT +R
Sbjct: 173 RGGGGGGVDDDCDWERQGAAVSRPSPRRRTPER 205
>07_01_1167 + 11030200-11031165,11031273-11031407,11031509-11031874
Length = 488
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +3
Query: 213 ILDLVEGIVELDIQTRPNLVRPSRGTASSGTFALYLARHNRLLKVVTFRA 362
++D I LD+ + +VR RG S FA + + +LKV+TFRA
Sbjct: 381 LVDDAAAIECLDLHLKEIVVRNYRGQKSHAAFAKFFVLNASVLKVMTFRA 430
>09_04_0383 + 17141534-17142046
Length = 170
Score = 31.5 bits (68), Expect = 0.63
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +2
Query: 161 DSLAASTSLIQSSSICCDP*PR 226
D LA S SL+ SS+ICCD PR
Sbjct: 122 DVLAGSASLLLSSAICCDSLPR 143
>04_04_0444 + 25270620-25273001
Length = 793
Score = 31.5 bits (68), Expect = 0.63
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 192 NRPLSAAILDLVEGIVELDIQTRPNLVRPSRGTASS 299
NRP A ++ ++EG++E+D+ P L++ G S
Sbjct: 755 NRPTMAQVVHILEGVLEVDMPPMPKLLQAISGNMDS 790
>04_03_0916 + 20794240-20794246,20794585-20796545
Length = 655
Score = 31.5 bits (68), Expect = 0.63
Identities = 13/43 (30%), Positives = 28/43 (65%)
Frame = +3
Query: 189 YNRPLSAAILDLVEGIVELDIQTRPNLVRPSRGTASSGTFALY 317
++RP ++ ++EG+VE+D+ P ++ G+++S T +LY
Sbjct: 608 FSRPTMGGVVQILEGLVEVDMPPMPRRLQAIAGSSNS-TCSLY 649
>05_01_0463 -
3666626-3666933,3667060-3667258,3667388-3667629,
3667823-3669035
Length = 653
Score = 31.1 bits (67), Expect = 0.84
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 192 NRPLSAAILDLVEGIVELDIQTRPNLVRPSRGTASS 299
NRP ++ ++EG++EL++ P L++ T SS
Sbjct: 617 NRPTMGEVVQILEGLLELEMPPMPRLLQAITATGSS 652
>04_03_0913 + 20777859-20780309
Length = 816
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +3
Query: 189 YNRPLSAAILDLVEGIVELDIQTRPNLVRPSRGTASSGT 305
+NRP ++ ++EG+VE+DI P L+ +S+ T
Sbjct: 764 FNRPTMDEVVHILEGLVEIDIPPMPRLLEAIVAGSSNPT 802
>04_03_0922 + 20834195-20836603
Length = 802
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 189 YNRPLSAAILDLVEGIVELDIQTRPNLVRPSRGTASS 299
++RP ++ ++EGI ELD P L++ G++ S
Sbjct: 763 FDRPTMGEVVQILEGIFELDTPPMPRLLQAIAGSSCS 799
>04_03_0920 + 20826876-20829293
Length = 805
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +3
Query: 189 YNRPLSAAILDLVEGIVELDIQTRPNLVRPSRGTASSGT 305
++RP A ++ +EG++ELD+ P L+ G + S T
Sbjct: 760 FDRPTMAEVVQALEGLLELDMPPLPRLLSAITGDSHSVT 798
>04_03_0914 + 20788103-20789642,20790036-20790529
Length = 677
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +3
Query: 189 YNRPLSAAILDLVEGIVELDIQTRPNLVRPSRGTASSGTFAL 314
+NRP ++ ++EG+VE+++ P L+ +S+ T +L
Sbjct: 632 FNRPTMGGVVQILEGLVEINMPPMPRLLEAIAAGSSNLTCSL 673
>07_01_0162 +
1138420-1138640,1138788-1138830,1139449-1140971,
1141770-1142063,1142145-1142337,1142624-1142694,
1142781-1144200
Length = 1254
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -3
Query: 387 EYWSLLDTLLERSRP*AADCDGQDRGQTSQRMQSHEMVGPN 265
EYWS+ R+RP +A CD ++ + R +S +MV P+
Sbjct: 375 EYWSIHHAETHRARPNSACCDCEEH-EHHGRSRSSDMVEPS 414
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/59 (30%), Positives = 24/59 (40%)
Frame = -3
Query: 387 EYWSLLDTLLERSRP*AADCDGQDRGQTSQRMQSHEMVGPNSVLSGYQARRCPPRGQGS 211
EYWS+ + R+RP A C GQ R + S P V+ + R R S
Sbjct: 1068 EYWSIHHSETHRARPNPACCHGQSRSSDMVEL-SGTTTFPEQVIKLFVQRHVSARPSSS 1125
>04_03_0443 + 15999984-16000895,16002402-16003025
Length = 511
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3
Query: 189 IREVDAARESRPSVMRRTTQRGGACLKEIW 100
I V ++RES S MRR +R GA L ++W
Sbjct: 47 IHHVVSSRESVHSAMRRLARRHGAPLMQLW 76
>02_05_0989 - 33343233-33344417
Length = 394
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 20 LVGNGRSRTSAKPDAWPEPLPTA*DSCQISF 112
L G G++R +AKP + PLP D C F
Sbjct: 326 LGGRGKNRFNAKPAMYDYPLPAPVDKCSHEF 356
>02_01_0483 -
3467813-3467873,3468072-3468154,3468505-3468579,
3468728-3468782,3470595-3470950
Length = 209
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/84 (27%), Positives = 34/84 (40%)
Frame = -3
Query: 306 TSQRMQSHEMVGPNSVLSGYQARRCPPRGQGSQQIEDDCIREVDAARESRPSVMRRTTQR 127
T QR+ E P Y ++ + + E C R R + +R+ +R
Sbjct: 2 TYQRIPPDE---PPGYERSYDEQQSKEEEEEADTKEGSCPLSRINGRRRRSANIRKGERR 58
Query: 126 GGACLKEIWQES*AVGRGSGHASG 55
GG E ++E A G GSG SG
Sbjct: 59 GGEWKSETYEEEAARGEGSGVLSG 82
>06_03_0924 - 25976629-25976979,25977471-25978424,25978512-25978565,
25979135-25979254,25979357-25979532,25979624-25980107,
25980541-25980744,25981671-25981877,25982179-25982271,
25982433-25982621,25983364-25983423,25983591-25983927,
25984195-25984432,25984614-25984816,25985549-25986554,
25987125-25987290,25987715-25987824,25987944-25988195,
25988360-25988402,25988488-25988550,25989512-25989624,
25990787-25990838
Length = 1824
Score = 28.3 bits (60), Expect = 5.9
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = -3
Query: 339 AADCDGQDRGQTSQRMQSHEMVGPNSVLSGYQARRCPPRGQGSQQIEDDCIRE--VDAAR 166
A + D +D G T R S +M G + G + RRC + Q +++I+DD V+
Sbjct: 1219 AEEFDDEDVGNTDIR--SDKMDG----MRGLKMRRCHTQSQINEEIQDDVAEAALVEKLL 1272
Query: 165 ESRPSVMRRTTQ 130
E S M+R Q
Sbjct: 1273 EESDSDMKRKKQ 1284
>06_03_0478 - 21259376-21259465,21259862-21259924,21260025-21260066,
21260180-21260461,21261084-21261587,21261973-21261981,
21262122-21262196,21262375-21262449,21262557-21263494,
21263577-21263607,21263694-21263979,21264691-21264905,
21265329-21265437,21265556-21265611,21265730-21265822,
21266348-21266393,21266496-21267221,21267489-21267550,
21267738-21268013,21268604-21268735,21268835-21268909
Length = 1394
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = -3
Query: 225 RGQGSQQIEDDCIREVDAARESRPSVMRRTTQRGGACLKEIWQES*AVGRGSGHASG 55
R Q +Q E+D +E E RP T G + E G+G+ H++G
Sbjct: 1078 RNQRKRQREEDLKKEDKKTSEKRPKTNDETLSESGPSNQGESVEMIKAGKGTAHSAG 1134
>01_06_1015 + 33819203-33821827
Length = 874
Score = 28.3 bits (60), Expect = 5.9
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2
Query: 251 PDKTEFGPTISWDCILWD 304
P T G T WDC++WD
Sbjct: 833 PFVTTIGETFWWDCLIWD 850
>01_06_0716 - 31425189-31426460
Length = 423
Score = 28.3 bits (60), Expect = 5.9
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = +3
Query: 117 MLLLVASFSSLLRVVTPSLHQPLLYNRPLSAAILDLVEGIVELDIQTRPNLVRPSRGTAS 296
M+ A F S LRV + + L YNR + +A ++ G+ D P + P+ TA
Sbjct: 311 MVPFTAKFVSRLRVFRAAGNPKLCYNRSVLSA--EIAIGVAPCDKYGFPVMAPPATATAR 368
Query: 297 SGTFALY 317
S A Y
Sbjct: 369 SERSADY 375
>10_08_0911 - 21499196-21499236,21499368-21499488,21499665-21499789,
21500187-21500418,21500488-21500668,21501342-21501438,
21501641-21501779,21502024-21502351,21502890-21503137,
21503270-21503543,21504200-21504291,21504451-21504521,
21505091-21505181,21506526-21507380,21507482-21507594,
21508007-21508074,21508655-21508835,21509084-21509186,
21509273-21509379,21510046-21511584,21511661-21511771,
21511856-21511908,21511988-21512063,21512147-21512366,
21512477-21512901,21513193-21513372,21513503-21515474
Length = 2680
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = -3
Query: 282 EMVGPNSVLSGYQARRCPPRGQGSQQIEDDCIREVDAARESRPSVMRRTTQ--RGGACLK 109
E+VG + G R P G+ ++ + C+++ +A+ R RR T+ +G AC+
Sbjct: 2544 EIVG-EAASPGSAHRGDSPSGEAAENVSLQCMKKDWSAKAGRTEGRRRRTRTAQGSACIP 2602
Query: 108 E 106
E
Sbjct: 2603 E 2603
>06_02_0306 + 14115751-14116450,14116882-14117691,14118957-14119141
Length = 564
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -2
Query: 301 PEDAVPRDGRTKFGLVW 251
P D +PR GRT GLVW
Sbjct: 293 PVDELPRFGRTHHGLVW 309
>04_03_0331 +
14510848-14511124,14511139-14511528,14511708-14511997,
14512080-14512154,14512194-14512409,14512727-14512795,
14512941-14513891
Length = 755
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -3
Query: 366 TLLERSRP*AADCDGQDRGQTSQRMQSHEMVGPNSVLSGYQARRCPPRG 220
TL R RP A G + RM + + GP+++ +G+QA PP G
Sbjct: 150 TLGLRGRPSAQGASGSGP-RRGGRMSAAGVDGPHAIGAGFQAPMAPPFG 197
>01_07_0061 +
40818077-40818241,40818494-40818716,40819015-40819263,
40819455-40819505,40819611-40819871,40819994-40820046,
40820234-40820348,40820475-40820696,40821280-40822253
Length = 770
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -3
Query: 195 DCIREVDAARESRPSVMRRTTQRGGACLKEIWQES*AVGRGSGHASGFADVLERP 31
D EV A SR + + TT+ C+ EI +G G H G +V+ P
Sbjct: 672 DPTSEVQDAMSSRNNSDQHTTEPRNGCMDEIQSIHKEMGNGVVHLLGETNVVAEP 726
>01_06_0572 -
30337572-30338107,30338209-30338422,30338505-30338862,
30338948-30339048,30339185-30339749,30340553-30340664,
30341196-30341372,30341589-30341686,30341859-30341953,
30342078-30342158
Length = 778
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +2
Query: 11 LDLLVGNGRSRTSAKPDAWPEPLPTA*DSCQISFKHAPPRCVVLLITEGRDSLAAST 181
+D VG+G S + +PLP A D + HA R VVL+ + G +T
Sbjct: 287 IDDAVGDGVDVMSVSIGSTGKPLPFAEDGIAVGALHAAMRGVVLVCSGGNSGPKPAT 343
>01_03_0289 -
14725832-14726114,14726216-14726298,14726432-14726545,
14727830-14728199,14728726-14728856,14728970-14729078,
14729257-14729378,14729522-14729625,14729849-14729953,
14730034-14730192,14730336-14730391,14730576-14730627,
14730725-14731031
Length = 664
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +3
Query: 171 LHQPLLYNRPLSAAILDLVEGIVELDIQTRPNLVRPSRGTASSGTFALYLARHNRLLKVV 350
+H P ++R ++++VE +V + T PN GT+ G AL +A N + +V
Sbjct: 127 MHIPF-HDRTPFEELVEMVEDVVRAEHATSPNKPIYLLGTSFGGCIALAVAARNPCIDLV 185
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,696,644
Number of Sequences: 37544
Number of extensions: 417548
Number of successful extensions: 1123
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1123
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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