Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5812
(614 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR749435-1|CAH18273.1| 223|Homo sapiens hypothetical protein pr... 31 3.2
X52425-1|CAA36672.1| 825|Homo sapiens interleukin 4 receptor p... 30 5.6
BC113567-1|AAI13568.1| 633|Homo sapiens UDP-N-acetyl-alpha-D-ga... 30 5.6
BC113565-1|AAI13566.1| 633|Homo sapiens UDP-N-acetyl-alpha-D-ga... 30 5.6
AK223591-1|BAD97311.1| 825|Homo sapiens interleukin 4 receptor ... 30 5.6
AF421855-1|AAL12163.1| 825|Homo sapiens interleukin 4 receptor ... 30 5.6
AC009495-1|AAY14678.1| 633|Homo sapiens unknown protein. 30 5.6
AC004525-1|AAC23495.1| 825|Homo sapiens Interleukin 4 alpha-cha... 30 5.6
AK127601-1|BAC87052.1| 415|Homo sapiens protein ( Homo sapiens ... 30 7.5
X92689-1|CAA63371.1| 633|Homo sapiens UDP-GalNAc:polypeptide N-... 29 9.9
>CR749435-1|CAH18273.1| 223|Homo sapiens hypothetical protein
protein.
Length = 223
Score = 31.1 bits (67), Expect = 3.2
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +1
Query: 277 LYFWLISRTDCQKNIYFYLYTVCEQLFTCICYCLMMRTSLL 399
+Y+ + + DC+ ++++Y +T+ E + +CLMM LL
Sbjct: 76 VYYQIFFQRDCE-SLFYYPFTIMEYFKNVLKFCLMMLMCLL 115
>X52425-1|CAA36672.1| 825|Homo sapiens interleukin 4 receptor
protein.
Length = 825
Score = 30.3 bits (65), Expect = 5.6
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 5/34 (14%)
Frame = +2
Query: 527 YQIHLYLGVQVSCSI*LNTCMRC-----EIKRNW 613
++ HL LGV VSC + L C+ C +IK+ W
Sbjct: 229 FEQHLLLGVSVSCIVILAVCLLCYVSITKIKKEW 262
>BC113567-1|AAI13568.1| 633|Homo sapiens
UDP-N-acetyl-alpha-D-galactosamine:polypeptide
N-acetylgalactosaminyltransferas protein.
Length = 633
Score = 30.3 bits (65), Expect = 5.6
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -3
Query: 561 ETCTPKYRCIWYRSTHHTRSFIYKQKTKHYCILTSRFDVKQRLDCKTLT 415
E +Y+ I+YR + K K + L+ RF++K RL CK T
Sbjct: 441 EVWMDEYKEIFYRRNTDAAKIV---KQKAFGDLSKRFEIKHRLQCKNFT 486
>BC113565-1|AAI13566.1| 633|Homo sapiens
UDP-N-acetyl-alpha-D-galactosamine:polypeptide
N-acetylgalactosaminyltransferas protein.
Length = 633
Score = 30.3 bits (65), Expect = 5.6
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -3
Query: 561 ETCTPKYRCIWYRSTHHTRSFIYKQKTKHYCILTSRFDVKQRLDCKTLT 415
E +Y+ I+YR + K K + L+ RF++K RL CK T
Sbjct: 441 EVWMDEYKEIFYRRNTDAAKIV---KQKAFGDLSKRFEIKHRLQCKNFT 486
>AK223591-1|BAD97311.1| 825|Homo sapiens interleukin 4 receptor
alpha chain isoform a precursor variant protein.
Length = 825
Score = 30.3 bits (65), Expect = 5.6
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 5/34 (14%)
Frame = +2
Query: 527 YQIHLYLGVQVSCSI*LNTCMRC-----EIKRNW 613
++ HL LGV VSC + L C+ C +IK+ W
Sbjct: 229 FEQHLLLGVSVSCIVILAVCLLCYVSITKIKKEW 262
>AF421855-1|AAL12163.1| 825|Homo sapiens interleukin 4 receptor
protein.
Length = 825
Score = 30.3 bits (65), Expect = 5.6
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 5/34 (14%)
Frame = +2
Query: 527 YQIHLYLGVQVSCSI*LNTCMRC-----EIKRNW 613
++ HL LGV VSC + L C+ C +IK+ W
Sbjct: 229 FEQHLLLGVSVSCIVILAVCLLCYVSITKIKKEW 262
>AC009495-1|AAY14678.1| 633|Homo sapiens unknown protein.
Length = 633
Score = 30.3 bits (65), Expect = 5.6
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -3
Query: 561 ETCTPKYRCIWYRSTHHTRSFIYKQKTKHYCILTSRFDVKQRLDCKTLT 415
E +Y+ I+YR + K K + L+ RF++K RL CK T
Sbjct: 441 EVWMDEYKEIFYRRNTDAAKIV---KQKAFGDLSKRFEIKHRLQCKNFT 486
>AC004525-1|AAC23495.1| 825|Homo sapiens Interleukin 4 alpha-chain
precursor protein.
Length = 825
Score = 30.3 bits (65), Expect = 5.6
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 5/34 (14%)
Frame = +2
Query: 527 YQIHLYLGVQVSCSI*LNTCMRC-----EIKRNW 613
++ HL LGV VSC + L C+ C +IK+ W
Sbjct: 229 FEQHLLLGVSVSCIVILAVCLLCYVSITKIKKEW 262
>AK127601-1|BAC87052.1| 415|Homo sapiens protein ( Homo sapiens
cDNA FLJ45698 fis, clone FEBRA2017811. ).
Length = 415
Score = 29.9 bits (64), Expect = 7.5
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = -3
Query: 588 IHVLS*IEHETCTPKYRCIWYRSTHHTRSFIYKQKTKHYCI 466
+H+ I TCT Y C + HT IY H CI
Sbjct: 121 VHIHMNIHTHTCTHIYTCTYTVVCTHTHMHIYTHMHTHTCI 161
>X92689-1|CAA63371.1| 633|Homo sapiens UDP-GalNAc:polypeptide
N-acetylgalactosaminyltransferase (GalNAc-T3) protein.
Length = 633
Score = 29.5 bits (63), Expect = 9.9
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -3
Query: 561 ETCTPKYRCIWYRSTHHTRSFIYKQKTKHYCILTSRFDVKQRLDCKTLT 415
E +Y+ I+YR + K K + L+ RF++K RL CK T
Sbjct: 441 EVWMDEYKEIFYRRNTDAAKIV---KQKAFGDLSKRFEIKHRLRCKNFT 486
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,360,352
Number of Sequences: 237096
Number of extensions: 1494927
Number of successful extensions: 5870
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5865
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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