Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5810
(621 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces pomb... 27 2.9
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 27 2.9
SPBC83.18c |||C2 domain protein|Schizosaccharomyces pombe|chr 2|... 27 2.9
SPAC3F10.04 |gsa1|gsh2|glutathione synthetase large subunit Gsa1... 26 3.8
SPBC543.07 |pek1|skh1, mkk1|MAP kinase kinase Pek1 |Schizosaccha... 26 3.8
SPCC584.11c |||Svf1 family protein Svf1|Schizosaccharomyces pomb... 26 5.1
SPBC1289.16c ||SPBC8E4.06|copper amine oxidase |Schizosaccharomy... 26 5.1
SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr 3||... 26 5.1
SPCC553.12c ||SPCC794.13|conserved fungal protein|Schizosaccharo... 26 5.1
SPAC20G8.08c |fft1||fun thirty related protein Fft1|Schizosaccha... 25 6.7
SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|c... 25 6.7
SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|c... 25 6.7
SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 8.8
>SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1018
Score = 26.6 bits (56), Expect = 2.9
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Frame = -3
Query: 370 SGDNAAIPTNPKT-----TIFPSVKNSGAFNFNLIGLGSIFPDDALSVSPASNHHLI 215
S + IP+ P T + + KNS A + +L + +D S+SPA +H +I
Sbjct: 449 SSNKRLIPSTPPTKKPINAVLDAAKNSAAKDLHLAKMKLNNKNDESSLSPAKSHAVI 505
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 26.6 bits (56), Expect = 2.9
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -1
Query: 543 GTGPNLYSNLSGVSNSAPSWIFPGACGTPACADS 442
GTG YS L N APS++FP T + S
Sbjct: 13 GTG---YSKLGYAGNDAPSYVFPTVIATRSAGAS 43
>SPBC83.18c |||C2 domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 272
Score = 26.6 bits (56), Expect = 2.9
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = -1
Query: 387 ASPSRPAEIMPLSQRTQKPRYSPPLRIPGLSISTLSGLVLFFLMTLLAFPQPPIITSYIG 208
+ PS+P + +P+S +PP R +S+ S L + L +FP P ++ Y
Sbjct: 160 SKPSKPRKKVPVSHPLPP---TPPSREEHVSVPRESSLFTYEDDPLPSFPSPYMVDDYYT 216
Query: 207 SD 202
D
Sbjct: 217 QD 218
>SPAC3F10.04 |gsa1|gsh2|glutathione synthetase large subunit
Gsa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 26.2 bits (55), Expect = 3.8
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -3
Query: 427 GKGSGSDQDMNGNSFT-LASSGDNAAIPTNPKTTIFPSVKNSGAF 296
GKG+ +G FT L+ S + I T T+FPSV GAF
Sbjct: 15 GKGARDFAFAHGVVFTELSVSKEGRNIATQIPITLFPSVIPHGAF 59
>SPBC543.07 |pek1|skh1, mkk1|MAP kinase kinase Pek1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 26.2 bits (55), Expect = 3.8
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +3
Query: 300 APEFLTEGNIVVFGFVGIAALSPLDARVKLFPFISWSDPEPFPV 431
APE ++ G+ + + L+ ++ + FPF P P P+
Sbjct: 247 APERISGGSYTISSDIWSLGLTLMEVALNRFPFPPEGSPPPMPI 290
>SPCC584.11c |||Svf1 family protein Svf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 380
Score = 25.8 bits (54), Expect = 5.1
Identities = 17/68 (25%), Positives = 26/68 (38%)
Frame = -3
Query: 430 TGKGSGSDQDMNGNSFTLASSGDNAAIPTNPKTTIFPSVKNSGAFNFNLIGLGSIFPDDA 251
TG G NG LASS + A + T I K ++ ++ +G I D
Sbjct: 205 TGPGMFVHALQNGKPHHLASSWEFALLQHKKFTAIMMQFKTPPSYGSTIVNIGGIAMKDK 264
Query: 250 LSVSPASN 227
+ + N
Sbjct: 265 IISATVDN 272
>SPBC1289.16c ||SPBC8E4.06|copper amine oxidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 794
Score = 25.8 bits (54), Expect = 5.1
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Frame = +3
Query: 390 FPFISWSDPEPFPVYYVRSLHRLGCHRLLEKSKMERNSILPTG*SI-SLDLSPSGSLEFR 566
F I + PE FP+ S+H L ++ + N L T S+ S + S +
Sbjct: 600 FGMIHFPAPEDFPIMPAESIHLF----LQPRNFFKHNPALDTSSSVNSTSEATSPNTHHE 655
Query: 567 FTRGTAQ--TGHVSPHHLNP 620
R T+Q H +PH P
Sbjct: 656 NLRDTSQKRESHSTPHDYEP 675
>SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 25.8 bits (54), Expect = 5.1
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -1
Query: 375 RPAEIMPLSQRTQKPRYSP 319
+PA +PLS+R+ P Y+P
Sbjct: 45 KPANSIPLSKRSTSPSYAP 63
>SPCC553.12c ||SPCC794.13|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 521
Score = 25.8 bits (54), Expect = 5.1
Identities = 9/34 (26%), Positives = 19/34 (55%)
Frame = +3
Query: 324 NIVVFGFVGIAALSPLDARVKLFPFISWSDPEPF 425
N+ + F+G + + + L+P+ S+S EP+
Sbjct: 415 NVSMLSFLGWSLILHFGSNAPLYPYFSFSKEEPY 448
>SPAC20G8.08c |fft1||fun thirty related protein
Fft1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 25.4 bits (53), Expect = 6.7
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = +2
Query: 71 LMSWDVATDDNLQYQFFPVSSGSVQFKVRAANDAHVA 181
+ SW DD QF S+GS+ ++ + + +A
Sbjct: 373 MRSWHNLFDDKKMEQFLNTSTGSISYEYNSQQPSSIA 409
>SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 796
Score = 25.4 bits (53), Expect = 6.7
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -1
Query: 336 KPRYSPPLRIPGLSISTLSGLVLFFLMTLLAFPQPPIITSYIGSD 202
K Y+P I GL++ TLS +LM L+ P ++ + G D
Sbjct: 50 KVLYAPRTTIEGLNLPTLSSSYYKWLMDLVNIPD-DVVQNCAGLD 93
>SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 25.4 bits (53), Expect = 6.7
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = -3
Query: 427 GKGSGSDQDMNGNSFTLASSGDNAAIPTNPKTTIFPSVKNSGAFNF 290
G GS + G+ +S A TNP + F ++ +FNF
Sbjct: 107 GLGSTGSANSTGDKSKNTASSATGAATTNPSGSTFNFGSSNNSFNF 152
>SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 230
Score = 25.0 bits (52), Expect = 8.8
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 357 PLSQRTQKPRYSPPLRIPGLSISTLSGLVLFFLMTLLAF 241
PLSQ+ P + P LS+ L FFL+ L+F
Sbjct: 91 PLSQKRPFPNFLHPFTGSELSLFRCLLLFFFFLLFFLSF 129
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,876,812
Number of Sequences: 5004
Number of extensions: 66436
Number of successful extensions: 189
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 189
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 273658928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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