Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5810
         (621 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122199-1|AAM52711.1|  308|Drosophila melanogaster LD46156p pro...   141   6e-34
AE013599-3120|AAF46666.1|  296|Drosophila melanogaster CG10527-P...   140   1e-33
AY069859-1|AAL40004.1|  313|Drosophila melanogaster SD10415p pro...    38   0.014
AE013599-3342|AAF46805.1|  585|Drosophila melanogaster CG6698-PA...    38   0.014
AE014297-334|AAF51967.1| 1379|Drosophila melanogaster CG1093-PA,...    31   1.3  
BT029028-1|ABJ16961.1|  677|Drosophila melanogaster HL01122p pro...    30   2.9  
AE014298-3220|ABI31006.1| 1470|Drosophila melanogaster CG40500-P...    30   2.9  
AY122074-1|AAM52586.1|  994|Drosophila melanogaster AT16994p pro...    28   8.9  
AE013599-641|AAF59100.3|  994|Drosophila melanogaster CG11641-PA...    28   8.9  

>AY122199-1|AAM52711.1|  308|Drosophila melanogaster LD46156p
           protein.
          Length = 308

 Score =  141 bits (342), Expect = 6e-34
 Identities = 59/106 (55%), Positives = 79/106 (74%)
 Frame = +2

Query: 71  LMSWDVATDDNLQYQFFPVSSGSVQFKVRAANDAHVALTTGPQESDPMYEVMIGGWGNAK 250
           +M  +V T D L+YQFFP S G   FKVR+  DAH+ALT  P+E+ P++E+ +GGW N K
Sbjct: 12  IMPIEVNTPDKLEYQFFPASGGVFTFKVRSPKDAHLALTPAPEENGPIFEIFLGGWENTK 71

Query: 251 SVIRKNRTKPDKVEIESPGILNGGEYRGFWVRWDSGIISAGREGEA 388
           SVIRK+R KP+  E+ +PGIL+ GE+RGFWVRW   +I+ GREG+A
Sbjct: 72  SVIRKDRQKPEVAEVPTPGILDAGEFRGFWVRWYDNVITVGREGDA 117



 Score = 31.9 bits (69), Expect = 0.72
 Identities = 9/12 (75%), Positives = 12/12 (100%)
 Frame = +1

Query: 442 GVCTGWGATGSW 477
           G+CTGWGA+G+W
Sbjct: 135 GICTGWGASGTW 146


>AE013599-3120|AAF46666.1|  296|Drosophila melanogaster CG10527-PA
           protein.
          Length = 296

 Score =  140 bits (340), Expect = 1e-33
 Identities = 59/105 (56%), Positives = 78/105 (74%)
 Frame = +2

Query: 74  MSWDVATDDNLQYQFFPVSSGSVQFKVRAANDAHVALTTGPQESDPMYEVMIGGWGNAKS 253
           M  +V T D L+YQFFP S G   FKVR+  DAH+ALT  P+E+ P++E+ +GGW N KS
Sbjct: 1   MPIEVNTPDKLEYQFFPASGGVFTFKVRSPKDAHLALTPAPEENGPIFEIFLGGWENTKS 60

Query: 254 VIRKNRTKPDKVEIESPGILNGGEYRGFWVRWDSGIISAGREGEA 388
           VIRK+R KP+  E+ +PGIL+ GE+RGFWVRW   +I+ GREG+A
Sbjct: 61  VIRKDRQKPEVAEVPTPGILDAGEFRGFWVRWYDNVITVGREGDA 105



 Score = 31.9 bits (69), Expect = 0.72
 Identities = 9/12 (75%), Positives = 12/12 (100%)
 Frame = +1

Query: 442 GVCTGWGATGSW 477
           G+CTGWGA+G+W
Sbjct: 123 GICTGWGASGTW 134


>AY069859-1|AAL40004.1|  313|Drosophila melanogaster SD10415p
           protein.
          Length = 313

 Score = 37.5 bits (83), Expect = 0.014
 Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
 Frame = +2

Query: 140 VQFKVRAANDAHVAL--TTGPQESDPMYEVMIGGWGNAKSVIR 262
           ++F V  A DAH+ L  T  P+ +D +YE++IG  GN  S IR
Sbjct: 78  LKFYVLTAMDAHILLSVTNHPRPNDRVYEIVIGAGGNTFSAIR 120


>AE013599-3342|AAF46805.1|  585|Drosophila melanogaster CG6698-PA
           protein.
          Length = 585

 Score = 37.5 bits (83), Expect = 0.014
 Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
 Frame = +2

Query: 140 VQFKVRAANDAHVAL--TTGPQESDPMYEVMIGGWGNAKSVIR 262
           ++F V  A DAH+ L  T  P+ +D +YE++IG  GN  S IR
Sbjct: 78  LKFYVLTAMDAHILLSVTNHPRPNDRVYEIVIGAGGNTFSAIR 120


>AE014297-334|AAF51967.1| 1379|Drosophila melanogaster CG1093-PA,
           isoform A protein.
          Length = 1379

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 20/71 (28%), Positives = 31/71 (43%)
 Frame = +3

Query: 228 LEAGETLRASSGKIEPSPIRLKLKAPEFLTEGNIVVFGFVGIAALSPLDARVKLFPFISW 407
           L+  E +R +     P+P+  K+KA +  T G     G V I   +   + + L   IS 
Sbjct: 52  LKMSEAMRNAQHDTSPNPVSSKMKASKSYTHGLSSSSGTVNIPTSTSAQSNLSLLADISP 111

Query: 408 SDPEPFPVYYV 440
           +    F V YV
Sbjct: 112 NHTHFFEVMYV 122


>BT029028-1|ABJ16961.1|  677|Drosophila melanogaster HL01122p
           protein.
          Length = 677

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 22/76 (28%), Positives = 32/76 (42%)
 Frame = -3

Query: 418 SGSDQDMNGNSFTLASSGDNAAIPTNPKTTIFPSVKNSGAFNFNLIGLGSIFPDDALSVS 239
           SG    ++G S  L++ G      T   TT    V   G     L+G+G +  D ++ V 
Sbjct: 593 SGISAHISGTS--LSTGGTGTGSTTTTATTPIGGVP-LGKAGSTLVGVGLVVADSSVDVG 649

Query: 238 PASNHHLIHRIRFLRA 191
            A NH   H  R + A
Sbjct: 650 YAHNHAHAHAHRHMAA 665


>AE014298-3220|ABI31006.1| 1470|Drosophila melanogaster CG40500-PD,
            isoform D protein.
          Length = 1470

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 22/76 (28%), Positives = 32/76 (42%)
 Frame = -3

Query: 418  SGSDQDMNGNSFTLASSGDNAAIPTNPKTTIFPSVKNSGAFNFNLIGLGSIFPDDALSVS 239
            SG    ++G S  L++ G      T   TT    V   G     L+G+G +  D ++ V 
Sbjct: 1386 SGISAHISGTS--LSTGGTGTGSTTTTATTPIGGVP-LGKAGSTLVGVGLVVADSSVDVG 1442

Query: 238  PASNHHLIHRIRFLRA 191
             A NH   H  R + A
Sbjct: 1443 YAHNHAHAHAHRHMAA 1458


>AY122074-1|AAM52586.1|  994|Drosophila melanogaster AT16994p
           protein.
          Length = 994

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
 Frame = -3

Query: 430 TGKGSGSDQDMNGNSFTLA-SSGDNAAIPTNPKTTIFPSVKNSGAFNFNLIGLGSIFPDD 254
           T KG  S     G+S     SS      P NP ++  P    S +   N++   +  P  
Sbjct: 201 TAKGGSSGNGSGGSSANSGTSSAQQQQQPDNPSSSSSPHHPLSASSLANVLAAATASPPP 260

Query: 253 ALSVSPAS 230
           +L   PAS
Sbjct: 261 SLQAPPAS 268


>AE013599-641|AAF59100.3|  994|Drosophila melanogaster CG11641-PA
           protein.
          Length = 994

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
 Frame = -3

Query: 430 TGKGSGSDQDMNGNSFTLA-SSGDNAAIPTNPKTTIFPSVKNSGAFNFNLIGLGSIFPDD 254
           T KG  S     G+S     SS      P NP ++  P    S +   N++   +  P  
Sbjct: 201 TAKGGSSGNGSGGSSANSGTSSAQQQQQPDNPSSSSSPHHPLSASSLANVLAAATASPPP 260

Query: 253 ALSVSPAS 230
           +L   PAS
Sbjct: 261 SLQAPPAS 268


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,914,176
Number of Sequences: 53049
Number of extensions: 782812
Number of successful extensions: 2447
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2447
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)