Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5810
         (621 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L13200-2|ABE73330.1|  810|Caenorhabditis elegans Hypothetical pr...    34   0.071
L13200-1|AAA28193.1| 1000|Caenorhabditis elegans Hypothetical pr...    34   0.071
AC024843-9|AAF60836.1|  263|Caenorhabditis elegans Hypothetical ...    31   0.50 
Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical pr...    29   2.0  
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ...    29   3.5  
Z83104-2|CAB54203.1|  563|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z83104-1|CAB54204.1|  573|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical pr...    28   6.2  
M13235-1|AAA28129.1|  552|Caenorhabditis elegans protein ( C.ele...    28   6.2  
Z82264-6|CAB05157.1|  214|Caenorhabditis elegans Hypothetical pr...    27   8.2  
AC024785-5|AAF60596.1|  577|Caenorhabditis elegans C-type lectin...    27   8.2  

>L13200-2|ABE73330.1|  810|Caenorhabditis elegans Hypothetical
           protein ZK1236.3b protein.
          Length = 810

 Score = 34.3 bits (75), Expect = 0.071
 Identities = 21/81 (25%), Positives = 36/81 (44%)
 Frame = +3

Query: 78  HGMWQQMTTFNTNSSLFQVDQFSSKSEQRMMPTSRSRQARKNRILCMR**LEAGETLRAS 257
           HG +QQ   ++         Q SS       P S S +A +  +  +R      E +RA 
Sbjct: 179 HGQYQQYQEYHQQHQAMNDGQSSSSVPSTSSP-SCSSEANRKEMETVREPAGPSELMRAI 237

Query: 258 SGKIEPSPIRLKLKAPEFLTE 320
           +  + P+P+ +K++ P  L E
Sbjct: 238 NAPVAPAPVVIKIETPVALPE 258


>L13200-1|AAA28193.1| 1000|Caenorhabditis elegans Hypothetical
           protein ZK1236.3a protein.
          Length = 1000

 Score = 34.3 bits (75), Expect = 0.071
 Identities = 21/81 (25%), Positives = 36/81 (44%)
 Frame = +3

Query: 78  HGMWQQMTTFNTNSSLFQVDQFSSKSEQRMMPTSRSRQARKNRILCMR**LEAGETLRAS 257
           HG +QQ   ++         Q SS       P S S +A +  +  +R      E +RA 
Sbjct: 369 HGQYQQYQEYHQQHQAMNDGQSSSSVPSTSSP-SCSSEANRKEMETVREPAGPSELMRAI 427

Query: 258 SGKIEPSPIRLKLKAPEFLTE 320
           +  + P+P+ +K++ P  L E
Sbjct: 428 NAPVAPAPVVIKIETPVALPE 448


>AC024843-9|AAF60836.1|  263|Caenorhabditis elegans Hypothetical
           protein Y61A9LA.9 protein.
          Length = 263

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = -1

Query: 387 ASPSRPAEIMPLSQRTQKPRYSPPLRIPGLSISTLSGLVLFFLMTLLAFPQPP 229
           A+PS P  I     +T+KP  S P +I   S +  +  +  F  TL + P  P
Sbjct: 186 ANPSLPVHIQTFRVKTRKPVLSRPTKIRFSSEADRNSFIFSFSKTLRSLPDRP 238


>Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical
           protein C44B9.4 protein.
          Length = 1150

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -2

Query: 521 LTCREYRIPLHLGFFQEPVAPQPVQTPNVVNWERFGIRPR 402
           +T  EY+  L+   F  P  P P+  P  V ++ F   PR
Sbjct: 800 ITYEEYQENLYSAEFASPQTPPPIPPPPAVYYDNFSDAPR 839


>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
           protein F21E9.1 protein.
          Length = 1170

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 18/63 (28%), Positives = 35/63 (55%)
 Frame = -3

Query: 391 NSFTLASSGDNAAIPTNPKTTIFPSVKNSGAFNFNLIGLGSIFPDDALSVSPASNHHLIH 212
           +S  L+S   N +  + P+T+    +  S +F+F+L       P  +L +SP  ++H+IH
Sbjct: 261 SSLLLSSINSNLSHNSIPQTSP-KRISQSSSFSFSL-------PPSSLPLSPKIDNHVIH 312

Query: 211 RIR 203
           +I+
Sbjct: 313 KIK 315


>Z83104-2|CAB54203.1|  563|Caenorhabditis elegans Hypothetical
           protein F09B12.1b protein.
          Length = 563

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 16/54 (29%), Positives = 30/54 (55%)
 Frame = -3

Query: 430 TGKGSGSDQDMNGNSFTLASSGDNAAIPTNPKTTIFPSVKNSGAFNFNLIGLGS 269
           TG G+G+     G SF  A +G+ A   ++ + T+F SVK +   + +++  G+
Sbjct: 334 TGAGAGAGSKFGG-SFEGAENGNAAVGTSHTEETVFASVKTAKLPSGHVVAKGA 386


>Z83104-1|CAB54204.1|  573|Caenorhabditis elegans Hypothetical
           protein F09B12.1a protein.
          Length = 573

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 16/54 (29%), Positives = 30/54 (55%)
 Frame = -3

Query: 430 TGKGSGSDQDMNGNSFTLASSGDNAAIPTNPKTTIFPSVKNSGAFNFNLIGLGS 269
           TG G+G+     G SF  A +G+ A   ++ + T+F SVK +   + +++  G+
Sbjct: 344 TGAGAGAGSKFGG-SFEGAENGNAAVGTSHTEETVFASVKTAKLPSGHVVAKGA 396


>Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical
           protein M79.1c protein.
          Length = 1209

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
 Frame = +2

Query: 281 DKVEIESPGILNGGEY----RGFWVRWDSGIISAGREGEAIPIH 400
           D+ EI     L GG+Y     G+W R D  I     + +A+P+H
Sbjct: 292 DRSEIIMHNKLGGGQYGDVYEGYWKRHDCTIAVKALKEDAMPLH 335


>Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical
           protein M79.1b protein.
          Length = 1214

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
 Frame = +2

Query: 281 DKVEIESPGILNGGEY----RGFWVRWDSGIISAGREGEAIPIH 400
           D+ EI     L GG+Y     G+W R D  I     + +A+P+H
Sbjct: 297 DRSEIIMHNKLGGGQYGDVYEGYWKRHDCTIAVKALKEDAMPLH 340


>Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical
           protein M79.1a protein.
          Length = 1224

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
 Frame = +2

Query: 281 DKVEIESPGILNGGEY----RGFWVRWDSGIISAGREGEAIPIH 400
           D+ EI     L GG+Y     G+W R D  I     + +A+P+H
Sbjct: 307 DRSEIIMHNKLGGGQYGDVYEGYWKRHDCTIAVKALKEDAMPLH 350


>M13235-1|AAA28129.1|  552|Caenorhabditis elegans protein (
           C.elegans DNA homologousto the v-abl oncogene. ).
          Length = 552

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
 Frame = +2

Query: 281 DKVEIESPGILNGGEY----RGFWVRWDSGIISAGREGEAIPIH 400
           D+ EI     L GG+Y     G+W R D  I     + +A+P+H
Sbjct: 158 DRSEIIMHNKLGGGQYGDVYEGYWKRHDCTIAVKALKEDAMPLH 201


>Z82264-6|CAB05157.1|  214|Caenorhabditis elegans Hypothetical
           protein C49C3.12 protein.
          Length = 214

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 17/45 (37%), Positives = 19/45 (42%)
 Frame = +2

Query: 458 GVPQAPGKIQDGAEFDTPDRLEYKFGPVPLWFFGISIYPGNRTNW 592
           GVP   G    GAEF  P           +W   I +YPGN T W
Sbjct: 2   GVPMGNGDC--GAEFKCPPNFHKSNRVNGVWC--IKVYPGNMTWW 42


>AC024785-5|AAF60596.1|  577|Caenorhabditis elegans C-type lectin
           protein 73 protein.
          Length = 577

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 203 SDPMYEVMIGGWGNAKSVIRKNRTK 277
           S+P YEV++GG   A  V+ +N+ K
Sbjct: 334 SNPHYEVVLGGKKTANFVVEENKIK 358


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,942,334
Number of Sequences: 27780
Number of extensions: 383872
Number of successful extensions: 1174
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1174
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)