Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5806
(677 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC050330-1|AAH50330.1| 1459|Homo sapiens ALMS1 protein protein. 32 2.2
BC035025-1|AAH35025.1| 1459|Homo sapiens ALMS1 protein protein. 32 2.2
AJ417593-1|CAD10391.2| 4169|Homo sapiens ALMS1 protein protein. 32 2.2
AC096546-1|AAX82023.1| 1291|Homo sapiens unknown protein. 32 2.2
AB002326-1|BAA20786.3| 2055|Homo sapiens KIAA0328 protein protein. 32 2.2
BC127102-1|AAI27103.1| 1214|Homo sapiens zinc finger E-box bindi... 30 6.6
BC127101-1|AAI27102.1| 1213|Homo sapiens zinc finger E-box bindi... 30 6.6
AY647157-1|AAT66509.1| 2881|Homo sapiens KISH2 protein. 30 6.6
AY029472-1|AAK52081.1| 1214|Homo sapiens smad-interacting protei... 30 6.6
AC010130-1|AAX93276.1| 1079|Homo sapiens unknown protein. 30 6.6
AB056507-1|BAB40819.1| 1214|Homo sapiens Smad interacting protei... 30 6.6
AB011141-1|BAA25495.2| 1318|Homo sapiens KIAA0569 protein protein. 30 6.6
BC033545-1|AAH33545.1| 700|Homo sapiens cancer antigen 1 protein. 30 8.7
BC026194-1|AAH26194.1| 700|Homo sapiens cancer antigen 1 protein. 30 8.7
AL139095-7|CAI16451.1| 847|Homo sapiens cancer antigen 1 protein. 30 8.7
AL139095-5|CAI16449.1| 545|Homo sapiens cancer antigen 1 protein. 30 8.7
AK097760-1|BAC05162.1| 824|Homo sapiens protein ( Homo sapiens ... 30 8.7
AF414185-1|AAO47239.1| 641|Homo sapiens CAGE-1 protein. 30 8.7
>BC050330-1|AAH50330.1| 1459|Homo sapiens ALMS1 protein protein.
Length = 1459
Score = 31.9 bits (69), Expect = 2.2
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +3
Query: 99 PNQQTRMTVSVTSIVNQMNQTKQKQESPITG----ASQVNHLDQTKQKRESPLDLSVKTV 266
P Q T+ TVS+ + N+ + +++Q P G S V+ LD+ + ++P+ S++
Sbjct: 1188 PEQTTQHTVSLNELWNKYRERQRQQRQPELGDRKELSLVDRLDRLAKILQNPITHSLQVS 1247
Query: 267 KNSADSS 287
+++ D S
Sbjct: 1248 ESTHDDS 1254
>BC035025-1|AAH35025.1| 1459|Homo sapiens ALMS1 protein protein.
Length = 1459
Score = 31.9 bits (69), Expect = 2.2
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +3
Query: 99 PNQQTRMTVSVTSIVNQMNQTKQKQESPITG----ASQVNHLDQTKQKRESPLDLSVKTV 266
P Q T+ TVS+ + N+ + +++Q P G S V+ LD+ + ++P+ S++
Sbjct: 1188 PEQTTQHTVSLNELWNKYRERQRQQRQPELGDRKELSLVDRLDRLAKILQNPITHSLQVS 1247
Query: 267 KNSADSS 287
+++ D S
Sbjct: 1248 ESTHDDS 1254
>AJ417593-1|CAD10391.2| 4169|Homo sapiens ALMS1 protein protein.
Length = 4169
Score = 31.9 bits (69), Expect = 2.2
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +3
Query: 99 PNQQTRMTVSVTSIVNQMNQTKQKQESPITG----ASQVNHLDQTKQKRESPLDLSVKTV 266
P Q T+ TVS+ + N+ + +++Q P G S V+ LD+ + ++P+ S++
Sbjct: 3589 PEQTTQHTVSLNELWNKYRERQRQQRQPELGDRKELSLVDRLDRLAKILQNPITHSLQVS 3648
Query: 267 KNSADSS 287
+++ D S
Sbjct: 3649 ESTHDDS 3655
>AC096546-1|AAX82023.1| 1291|Homo sapiens unknown protein.
Length = 1291
Score = 31.9 bits (69), Expect = 2.2
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +3
Query: 99 PNQQTRMTVSVTSIVNQMNQTKQKQESPITG----ASQVNHLDQTKQKRESPLDLSVKTV 266
P Q T+ TVS+ + N+ + +++Q P G S V+ LD+ + ++P+ S++
Sbjct: 1030 PEQTTQHTVSLNELWNKYRERQRQQRQPELGDRKELSLVDRLDRLAKILQNPITHSLQVS 1089
Query: 267 KNSADSS 287
+++ D S
Sbjct: 1090 ESTHDDS 1096
>AB002326-1|BAA20786.3| 2055|Homo sapiens KIAA0328 protein protein.
Length = 2055
Score = 31.9 bits (69), Expect = 2.2
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +3
Query: 99 PNQQTRMTVSVTSIVNQMNQTKQKQESPITG----ASQVNHLDQTKQKRESPLDLSVKTV 266
P Q T+ TVS+ + N+ + +++Q P G S V+ LD+ + ++P+ S++
Sbjct: 1522 PEQTTQHTVSLNELWNKYRERQRQQRQPELGDRKELSLVDRLDRLAKILQNPITHSLQVS 1581
Query: 267 KNSADSS 287
+++ D S
Sbjct: 1582 ESTHDDS 1588
>BC127102-1|AAI27103.1| 1214|Homo sapiens zinc finger E-box binding
homeobox 2 protein.
Length = 1214
Score = 30.3 bits (65), Expect = 6.6
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 135 SIVNQMNQTKQKQESPITGASQVNHLDQTKQKRESPLDLSVKTVKNSADSSTT 293
S+ N + + S T V LD ++ SPL+LS + KNS SS T
Sbjct: 750 SVTNCDPPLRLTKPSHFTNIKPVEKLDHSRSNTPSPLNLSSTSSKNSHSSSYT 802
>BC127101-1|AAI27102.1| 1213|Homo sapiens zinc finger E-box binding
homeobox 2 protein.
Length = 1213
Score = 30.3 bits (65), Expect = 6.6
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 135 SIVNQMNQTKQKQESPITGASQVNHLDQTKQKRESPLDLSVKTVKNSADSSTT 293
S+ N + + S T V LD ++ SPL+LS + KNS SS T
Sbjct: 749 SVTNCDPPLRLTKPSHFTNIKPVEKLDHSRSNTPSPLNLSSTSSKNSHSSSYT 801
>AY647157-1|AAT66509.1| 2881|Homo sapiens KISH2 protein.
Length = 2881
Score = 30.3 bits (65), Expect = 6.6
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +3
Query: 126 SVTSIVNQMNQTKQKQESPITGASQVNHLDQTK-QKRESPLDLSVKTVKNSADSSTTQDD 302
S +S + + + S + +S+ + D+ + QKRES + ++ A STTQD+
Sbjct: 2170 SCSSASSSSSSSTSSSSSSFSSSSEESDSDEEEAQKRESTTHMKAYDEESVASLSTTQDE 2229
Query: 303 AVDS 314
DS
Sbjct: 2230 TQDS 2233
>AY029472-1|AAK52081.1| 1214|Homo sapiens smad-interacting protein-1
protein.
Length = 1214
Score = 30.3 bits (65), Expect = 6.6
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 135 SIVNQMNQTKQKQESPITGASQVNHLDQTKQKRESPLDLSVKTVKNSADSSTT 293
S+ N + + S T V LD ++ SPL+LS + KNS SS T
Sbjct: 750 SVTNCDPPLRLTKPSHFTNIKPVEKLDHSRSNTPSPLNLSSTSSKNSHSSSYT 802
>AC010130-1|AAX93276.1| 1079|Homo sapiens unknown protein.
Length = 1079
Score = 30.3 bits (65), Expect = 6.6
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 135 SIVNQMNQTKQKQESPITGASQVNHLDQTKQKRESPLDLSVKTVKNSADSSTT 293
S+ N + + S T V LD ++ SPL+LS + KNS SS T
Sbjct: 615 SVTNCDPPLRLTKPSHFTNIKPVEKLDHSRSNTPSPLNLSSTSSKNSHSSSYT 667
>AB056507-1|BAB40819.1| 1214|Homo sapiens Smad interacting protein 1
protein.
Length = 1214
Score = 30.3 bits (65), Expect = 6.6
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 135 SIVNQMNQTKQKQESPITGASQVNHLDQTKQKRESPLDLSVKTVKNSADSSTT 293
S+ N + + S T V LD ++ SPL+LS + KNS SS T
Sbjct: 750 SVTNCDPPLRLTKPSHFTNIKPVEKLDHSRSNTPSPLNLSSTSSKNSHSSSYT 802
>AB011141-1|BAA25495.2| 1318|Homo sapiens KIAA0569 protein protein.
Length = 1318
Score = 30.3 bits (65), Expect = 6.6
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 135 SIVNQMNQTKQKQESPITGASQVNHLDQTKQKRESPLDLSVKTVKNSADSSTT 293
S+ N + + S T V LD ++ SPL+LS + KNS SS T
Sbjct: 854 SVTNCDPPLRLTKPSHFTNIKPVEKLDHSRSNTPSPLNLSSTSSKNSHSSSYT 906
>BC033545-1|AAH33545.1| 700|Homo sapiens cancer antigen 1 protein.
Length = 700
Score = 29.9 bits (64), Expect = 8.7
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = -3
Query: 561 EKILLDKFQVIFENHRCRYILQNYEAAVLVDCKKHL 454
E+++ DK+++I E + + LQN E VL + +KHL
Sbjct: 362 EELIEDKYKIILEKNDTKKTLQNLE-EVLANTQKHL 396
>BC026194-1|AAH26194.1| 700|Homo sapiens cancer antigen 1 protein.
Length = 700
Score = 29.9 bits (64), Expect = 8.7
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = -3
Query: 561 EKILLDKFQVIFENHRCRYILQNYEAAVLVDCKKHL 454
E+++ DK+++I E + + LQN E VL + +KHL
Sbjct: 362 EELIEDKYKIILEKNDTKKTLQNLE-EVLANTQKHL 396
>AL139095-7|CAI16451.1| 847|Homo sapiens cancer antigen 1 protein.
Length = 847
Score = 29.9 bits (64), Expect = 8.7
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = -3
Query: 561 EKILLDKFQVIFENHRCRYILQNYEAAVLVDCKKHL 454
E+++ DK+++I E + + LQN E VL + +KHL
Sbjct: 392 EELIEDKYKIILEKNDTKKTLQNLE-EVLANTQKHL 426
>AL139095-5|CAI16449.1| 545|Homo sapiens cancer antigen 1 protein.
Length = 545
Score = 29.9 bits (64), Expect = 8.7
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = -3
Query: 561 EKILLDKFQVIFENHRCRYILQNYEAAVLVDCKKHL 454
E+++ DK+++I E + + LQN E VL + +KHL
Sbjct: 90 EELIEDKYKIILEKNDTKKTLQNLE-EVLANTQKHL 124
>AK097760-1|BAC05162.1| 824|Homo sapiens protein ( Homo sapiens
cDNA FLJ40441 fis, clone TESTI2040094. ).
Length = 824
Score = 29.9 bits (64), Expect = 8.7
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = -3
Query: 561 EKILLDKFQVIFENHRCRYILQNYEAAVLVDCKKHL 454
E+++ DK+++I E + + LQN E VL + +KHL
Sbjct: 362 EELIEDKYKIILEKNDTKKTLQNLE-EVLANTQKHL 396
>AF414185-1|AAO47239.1| 641|Homo sapiens CAGE-1 protein.
Length = 641
Score = 29.9 bits (64), Expect = 8.7
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = -3
Query: 561 EKILLDKFQVIFENHRCRYILQNYEAAVLVDCKKHL 454
E+++ DK+++I E + + LQN E VL + +KHL
Sbjct: 226 EELIEDKYKIILEKNDTKKTLQNLE-EVLANTQKHL 260
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,236,550
Number of Sequences: 237096
Number of extensions: 1745561
Number of successful extensions: 3430
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3430
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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