Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5806
(677 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein ... 36 0.051
AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein ... 36 0.051
M59447-1|AAA28922.1| 354|Drosophila melanogaster Sx1 protein. 34 0.21
M23636-1|AAA28884.1| 354|Drosophila melanogaster sex-linked pro... 34 0.21
AE014298-1011|AAZ52512.1| 314|Drosophila melanogaster CG18350-P... 34 0.21
AE014298-1010|AAO41638.2| 314|Drosophila melanogaster CG18350-P... 34 0.21
AE014298-1009|AAF46241.3| 339|Drosophila melanogaster CG18350-P... 34 0.21
AE014298-1008|AAZ52511.1| 354|Drosophila melanogaster CG18350-P... 34 0.21
AE014298-1007|AAG22410.1| 354|Drosophila melanogaster CG18350-P... 34 0.21
AE014298-1006|AAN09198.1| 346|Drosophila melanogaster CG18350-P... 34 0.21
AE014298-1005|AAN09200.2| 346|Drosophila melanogaster CG18350-P... 34 0.21
AE014298-1004|AAZ52510.1| 344|Drosophila melanogaster CG18350-P... 34 0.21
AE014298-1003|AAN09197.1| 344|Drosophila melanogaster CG18350-P... 34 0.21
BT001839-1|AAN71596.1| 241|Drosophila melanogaster RH51979p pro... 33 0.47
AY060755-1|AAL28303.1| 230|Drosophila melanogaster GH20817p pro... 33 0.47
AE013599-924|AAF58901.1| 232|Drosophila melanogaster CG1648-PB,... 33 0.47
AE013599-923|AAF58898.1| 230|Drosophila melanogaster CG1648-PA,... 33 0.47
AE014296-3057|AAN11668.1| 2133|Drosophila melanogaster CG14073-P... 29 5.8
>AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 35.9 bits (79), Expect = 0.051
Identities = 36/165 (21%), Positives = 65/165 (39%), Gaps = 10/165 (6%)
Frame = +3
Query: 120 TVSVTSIVNQMNQTKQ----KQESPITGASQVNHLDQTKQKRESPL-DLSVKTVKNSADS 284
T + S +Q+++TK K SP+T N +T + P ++ K +S
Sbjct: 211 TAQIDSSHSQLHETKPTQPAKNPSPLTQKLTTNKTAKTHTHTDKPTASQNLFPTKTHINS 270
Query: 285 STTQDDA-VDSASVEGKI---LHA-LXXXXXXXXXXXXVGYTAAHKVDFAPNFTTQYGER 449
T +D +AS +GKI H+ L + A N T +
Sbjct: 271 PTQYNDTNASTASKDGKINLSSHSHLRETKPTQPAKNPSPLSQKQITSIAANTLTHTNKH 330
Query: 450 STNVSYNPPTPQLHNSVRYNGTYDSRRLPETYPVESSHVYAERSK 584
+ + ++ P ++ +YN T ++ L P SH Y+ ++K
Sbjct: 331 TASQNFIPAKTHINIPTQYNDTNATKALKTAKPASPSHTYSRQTK 375
>AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 35.9 bits (79), Expect = 0.051
Identities = 36/165 (21%), Positives = 65/165 (39%), Gaps = 10/165 (6%)
Frame = +3
Query: 120 TVSVTSIVNQMNQTKQ----KQESPITGASQVNHLDQTKQKRESPL-DLSVKTVKNSADS 284
T + S +Q+++TK K SP+T N +T + P ++ K +S
Sbjct: 211 TAQIDSSHSQLHETKPTQPAKNPSPLTQKLTTNKTAKTHTHTDKPTASQNLFPTKTHINS 270
Query: 285 STTQDDA-VDSASVEGKI---LHA-LXXXXXXXXXXXXVGYTAAHKVDFAPNFTTQYGER 449
T +D +AS +GKI H+ L + A N T +
Sbjct: 271 PTQYNDTNASTASKDGKINLSSHSHLRETKPTQPAKNPSPLSQKQITSIAANTLTHTNKH 330
Query: 450 STNVSYNPPTPQLHNSVRYNGTYDSRRLPETYPVESSHVYAERSK 584
+ + ++ P ++ +YN T ++ L P SH Y+ ++K
Sbjct: 331 TASQNFIPAKTHINIPTQYNDTNATKALKTAKPASPSHTYSRQTK 375
>M59447-1|AAA28922.1| 354|Drosophila melanogaster Sx1 protein.
Length = 354
Score = 33.9 bits (74), Expect = 0.21
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 417 APNFTTQYGERSTNVSYNPPTPQLHNSVRYNGTYDSRRLPETYPVESSHVYAERSKY 587
A +F +Q G NV PP P H + +N + R + ++SH Y + K+
Sbjct: 297 AAHFMSQMGVVPANVPPPPPQPPAHMAAAFNMMHRGRSIKSQQRFQNSHPYFDAKKF 353
>M23636-1|AAA28884.1| 354|Drosophila melanogaster sex-linked
protein protein.
Length = 354
Score = 33.9 bits (74), Expect = 0.21
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 417 APNFTTQYGERSTNVSYNPPTPQLHNSVRYNGTYDSRRLPETYPVESSHVYAERSKY 587
A +F +Q G NV PP P H + +N + R + ++SH Y + K+
Sbjct: 297 AAHFMSQMGVVPANVPPPPPQPPAHMAAAFNMMHRGRSIKSQQRFQNSHPYFDAKKF 353
>AE014298-1011|AAZ52512.1| 314|Drosophila melanogaster CG18350-PE,
isoform E protein.
Length = 314
Score = 33.9 bits (74), Expect = 0.21
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 417 APNFTTQYGERSTNVSYNPPTPQLHNSVRYNGTYDSRRLPETYPVESSHVYAERSKY 587
A +F +Q G NV PP P H + +N + R + ++SH Y + K+
Sbjct: 257 AAHFMSQMGVVPANVPPPPPQPPAHMAAAFNMMHRGRSIKSQQRFQNSHPYFDAKKF 313
>AE014298-1010|AAO41638.2| 314|Drosophila melanogaster CG18350-PA,
isoform A protein.
Length = 314
Score = 33.9 bits (74), Expect = 0.21
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 417 APNFTTQYGERSTNVSYNPPTPQLHNSVRYNGTYDSRRLPETYPVESSHVYAERSKY 587
A +F +Q G NV PP P H + +N + R + ++SH Y + K+
Sbjct: 257 AAHFMSQMGVVPANVPPPPPQPPAHMAAAFNMMHRGRSIKSQQRFQNSHPYFDAKKF 313
>AE014298-1009|AAF46241.3| 339|Drosophila melanogaster CG18350-PI,
isoform I protein.
Length = 339
Score = 33.9 bits (74), Expect = 0.21
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 417 APNFTTQYGERSTNVSYNPPTPQLHNSVRYNGTYDSRRLPETYPVESSHVYAERSKY 587
A +F +Q G NV PP P H + +N + R + ++SH Y + K+
Sbjct: 282 AAHFMSQMGVVPANVPPPPPQPPAHMAAAFNMMHRGRSIKSQQRFQNSHPYFDAKKF 338
>AE014298-1008|AAZ52511.1| 354|Drosophila melanogaster CG18350-PL,
isoform L protein.
Length = 354
Score = 33.9 bits (74), Expect = 0.21
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 417 APNFTTQYGERSTNVSYNPPTPQLHNSVRYNGTYDSRRLPETYPVESSHVYAERSKY 587
A +F +Q G NV PP P H + +N + R + ++SH Y + K+
Sbjct: 297 AAHFMSQMGVVPANVPPPPPQPPAHMAAAFNMMHRGRSIKSQQRFQNSHPYFDAKKF 353
>AE014298-1007|AAG22410.1| 354|Drosophila melanogaster CG18350-PD,
isoform D protein.
Length = 354
Score = 33.9 bits (74), Expect = 0.21
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 417 APNFTTQYGERSTNVSYNPPTPQLHNSVRYNGTYDSRRLPETYPVESSHVYAERSKY 587
A +F +Q G NV PP P H + +N + R + ++SH Y + K+
Sbjct: 297 AAHFMSQMGVVPANVPPPPPQPPAHMAAAFNMMHRGRSIKSQQRFQNSHPYFDAKKF 353
>AE014298-1006|AAN09198.1| 346|Drosophila melanogaster CG18350-PJ,
isoform J protein.
Length = 346
Score = 33.9 bits (74), Expect = 0.21
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 417 APNFTTQYGERSTNVSYNPPTPQLHNSVRYNGTYDSRRLPETYPVESSHVYAERSKY 587
A +F +Q G NV PP P H + +N + R + ++SH Y + K+
Sbjct: 289 AAHFMSQMGVVPANVPPPPPQPPAHMAAAFNMMHRGRSIKSQQRFQNSHPYFDAKKF 345
>AE014298-1005|AAN09200.2| 346|Drosophila melanogaster CG18350-PG,
isoform G protein.
Length = 346
Score = 33.9 bits (74), Expect = 0.21
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 417 APNFTTQYGERSTNVSYNPPTPQLHNSVRYNGTYDSRRLPETYPVESSHVYAERSKY 587
A +F +Q G NV PP P H + +N + R + ++SH Y + K+
Sbjct: 289 AAHFMSQMGVVPANVPPPPPQPPAHMAAAFNMMHRGRSIKSQQRFQNSHPYFDAKKF 345
>AE014298-1004|AAZ52510.1| 344|Drosophila melanogaster CG18350-PN,
isoform N protein.
Length = 344
Score = 33.9 bits (74), Expect = 0.21
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 417 APNFTTQYGERSTNVSYNPPTPQLHNSVRYNGTYDSRRLPETYPVESSHVYAERSKY 587
A +F +Q G NV PP P H + +N + R + ++SH Y + K+
Sbjct: 287 AAHFMSQMGVVPANVPPPPPQPPAHMAAAFNMMHRGRSIKSQQRFQNSHPYFDAKKF 343
>AE014298-1003|AAN09197.1| 344|Drosophila melanogaster CG18350-PC,
isoform C protein.
Length = 344
Score = 33.9 bits (74), Expect = 0.21
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 417 APNFTTQYGERSTNVSYNPPTPQLHNSVRYNGTYDSRRLPETYPVESSHVYAERSKY 587
A +F +Q G NV PP P H + +N + R + ++SH Y + K+
Sbjct: 287 AAHFMSQMGVVPANVPPPPPQPPAHMAAAFNMMHRGRSIKSQQRFQNSHPYFDAKKF 343
>BT001839-1|AAN71596.1| 241|Drosophila melanogaster RH51979p
protein.
Length = 241
Score = 32.7 bits (71), Expect = 0.47
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = +3
Query: 90 AGYPNQQTRMTVSVTSIVNQMNQTKQKQESPITGASQ---VNHLDQTKQKRESPLDLSVK 260
AG NQ + + + + Q ++ + + ASQ N +DQTK+ ++ SVK
Sbjct: 105 AGAVNQGKQAVDNTVAQAAAVAQNSKQVAANVAEASQRAAANAVDQTKKAANDAINKSVK 164
Query: 261 TVKNSADSSTTQ-DDAVDSA 317
+N AD Q + A+D A
Sbjct: 165 AAENVADQKLKQAEGAIDGA 184
>AY060755-1|AAL28303.1| 230|Drosophila melanogaster GH20817p
protein.
Length = 230
Score = 32.7 bits (71), Expect = 0.47
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = +3
Query: 90 AGYPNQQTRMTVSVTSIVNQMNQTKQKQESPITGASQ---VNHLDQTKQKRESPLDLSVK 260
AG NQ + + + + Q ++ + + ASQ N +DQTK+ ++ SVK
Sbjct: 94 AGAVNQGKQAVDNTVAQAAAVAQNSKQVAANVAEASQRAAANAVDQTKKAANDAINKSVK 153
Query: 261 TVKNSADSSTTQ-DDAVDSA 317
+N AD Q + A+D A
Sbjct: 154 AAENVADQKLKQAEGAIDGA 173
>AE013599-924|AAF58901.1| 232|Drosophila melanogaster CG1648-PB,
isoform B protein.
Length = 232
Score = 32.7 bits (71), Expect = 0.47
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = +3
Query: 90 AGYPNQQTRMTVSVTSIVNQMNQTKQKQESPITGASQ---VNHLDQTKQKRESPLDLSVK 260
AG NQ + + + + Q ++ + + ASQ N +DQTK+ ++ SVK
Sbjct: 96 AGAVNQGKQAVDNTVAQAAAVAQNSKQVAANVAEASQRAAANAVDQTKKAANDAINKSVK 155
Query: 261 TVKNSADSSTTQ-DDAVDSA 317
+N AD Q + A+D A
Sbjct: 156 AAENVADQKLKQAEGAIDGA 175
>AE013599-923|AAF58898.1| 230|Drosophila melanogaster CG1648-PA,
isoform A protein.
Length = 230
Score = 32.7 bits (71), Expect = 0.47
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = +3
Query: 90 AGYPNQQTRMTVSVTSIVNQMNQTKQKQESPITGASQ---VNHLDQTKQKRESPLDLSVK 260
AG NQ + + + + Q ++ + + ASQ N +DQTK+ ++ SVK
Sbjct: 94 AGAVNQGKQAVDNTVAQAAAVAQNSKQVAANVAEASQRAAANAVDQTKKAANDAINKSVK 153
Query: 261 TVKNSADSSTTQ-DDAVDSA 317
+N AD Q + A+D A
Sbjct: 154 AAENVADQKLKQAEGAIDGA 173
>AE014296-3057|AAN11668.1| 2133|Drosophila melanogaster CG14073-PB,
isoform B protein.
Length = 2133
Score = 29.1 bits (62), Expect = 5.8
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +3
Query: 237 SPLDLSVKTVKNSADSS 287
SPLDLS++TVK +ADS+
Sbjct: 680 SPLDLSMRTVKQTADST 696
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,301,332
Number of Sequences: 53049
Number of extensions: 552435
Number of successful extensions: 2041
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2036
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -