Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5806
(677 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 24 1.5
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 2.7
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 2.7
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 22 6.2
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 6.2
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 6.2
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 6.2
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 6.2
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 6.2
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 6.2
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 22 6.2
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 21 8.2
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 23.8 bits (49), Expect = 1.5
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = -3
Query: 303 RRPVLLKSLQNFSPSSLINPKGTHVSVSFDQGDSLVMLL*LVILASVWFDSF 148
+ P+++ + L+ P+GT S S Q V LL ++L + + +F
Sbjct: 69 KNPIIVMYYAGAVKAGLVQPQGTTFSNSISQLRKEVSLLYRILLGAKDYQTF 120
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 23.0 bits (47), Expect = 2.7
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = +3
Query: 162 KQKQESPITGASQVNHLDQTKQKRESPLDLSVKTVKNSADSS 287
K ++ SP+TGAS+ + + +Q+ L +V ++++A +S
Sbjct: 359 KSQKPSPVTGASKSHGDLELRQRSSKSLLANVLDLEDNALAS 400
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.0 bits (47), Expect = 2.7
Identities = 13/48 (27%), Positives = 20/48 (41%)
Frame = +3
Query: 105 QQTRMTVSVTSIVNQMNQTKQKQESPITGASQVNHLDQTKQKRESPLD 248
Q+ R ++TS Q Q +Q+Q+ Q+NH P D
Sbjct: 1435 QEDRDRKTLTSAPQQPQQQQQQQQQQQQQQQQLNHYPDLHNLYAVPTD 1482
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 21.8 bits (44), Expect = 6.2
Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +3
Query: 459 VSYNPPTPQLHNSVRYNGTY-DSRRLPETYPVESSHVY 569
+ YN P + N++ NG Y + +P + + V+
Sbjct: 27 IEYNFPNDNIRNTLISNGDYIEENNMPNGMQIWNDKVF 64
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 6.2
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = -3
Query: 675 NSIITRTWITRRSSNIYFSAHNLLWLQTRHIYSALRRHEKILLDKFQVIFENHRCR 508
NS+ +RT + +S+ Y + + R RR+EK+ +K +++ E C+
Sbjct: 215 NSLRSRTHGFQHTSSRYSRERSCSRDRNREYRKKDRRYEKLHNEKEKLLEERTSCK 270
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.2
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = -3
Query: 675 NSIITRTWITRRSSNIYFSAHNLLWLQTRHIYSALRRHEKILLDKFQVIFENHRCR 508
NS+ +RT + +S+ Y + + R RR+EK+ +K +++ E C+
Sbjct: 215 NSLRSRTHGFQHTSSHYSRERSCSRDRNREYRKKDRRYEKLHNEKEKLLEERTSCK 270
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.2
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = -3
Query: 675 NSIITRTWITRRSSNIYFSAHNLLWLQTRHIYSALRRHEKILLDKFQVIFENHRCR 508
NS+ +RT + +S+ Y + + R RR+EK+ +K +++ E C+
Sbjct: 215 NSLRSRTHGFQHTSSHYSRERSCSRDRNREYRKKDRRYEKLHNEKEKLLEERTSCK 270
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.2
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = -3
Query: 675 NSIITRTWITRRSSNIYFSAHNLLWLQTRHIYSALRRHEKILLDKFQVIFENHRCR 508
NS+ +RT + +S+ Y + + R RR+EK+ +K +++ E C+
Sbjct: 215 NSLRSRTHGFQHTSSHYSRERSCSRDRNREYRKKDRRYEKLHNEKEKLLEERTSCK 270
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.2
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = -3
Query: 675 NSIITRTWITRRSSNIYFSAHNLLWLQTRHIYSALRRHEKILLDKFQVIFENHRCR 508
NS+ +RT + +S+ Y + + R RR+EK+ +K +++ E C+
Sbjct: 215 NSLRSRTHGFQHTSSHYSRERSCSRDRNREYRKKDRRYEKLHNEKEKLLEERTSCK 270
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 6.2
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = -3
Query: 675 NSIITRTWITRRSSNIYFSAHNLLWLQTRHIYSALRRHEKILLDKFQVIFENHRCR 508
NS+ +RT + +S+ Y + + R RR+EK+ +K +++ E C+
Sbjct: 204 NSLRSRTHGFQHTSSHYSRERSCSRDRNREYRKKDRRYEKLHNEKEKLLEERTSCK 259
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 21.8 bits (44), Expect = 6.2
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = +3
Query: 411 DFAPNFTTQYGERSTNVSYNPPTPQLHNS 497
D +P+F + + Y P+PQ+++S
Sbjct: 122 DNSPSFLSDHSRDQEQNLYLTPSPQMYSS 150
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 21.4 bits (43), Expect = 8.2
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = -3
Query: 336 IFCLRLMRNLLRRPVLLKSLQNFSPSSL 253
+ CLR +RNL R+ +++ N++P ++
Sbjct: 401 VSCLRELRNLGRKTIMV----NYNPETV 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,787
Number of Sequences: 438
Number of extensions: 3435
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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