Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5802
         (552 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77136-5|CAB00882.1| 1152|Caenorhabditis elegans Hypothetical pr...    28   5.1  
AF016443-12|AAC24279.2|  340|Caenorhabditis elegans Seven tm rec...    28   5.1  
AL117202-8|CAB57891.1|  547|Caenorhabditis elegans Hypothetical ...    27   6.8  
AF101305-6|AAF98598.1|  506|Caenorhabditis elegans Udp-glucurono...    27   9.0  

>Z77136-5|CAB00882.1| 1152|Caenorhabditis elegans Hypothetical
           protein ZC376.6 protein.
          Length = 1152

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -2

Query: 386 REGVQNANIFLKLPLKYIKSIKKHDTHNHE 297
           R  + + +IFLKLP++YI S+ ++     E
Sbjct: 692 RNSLYDKSIFLKLPVRYILSVMEYQHEKFE 721


>AF016443-12|AAC24279.2|  340|Caenorhabditis elegans Seven tm
           receptor protein 229 protein.
          Length = 340

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +1

Query: 262 RSQTLTTNKRVYSWLCVSCFFIDLMYFNG-NFKKILAFCTPSLYSLQ 399
           R  T+T N R  S + V CF++ +  F G  F  ++ FC  S  SL+
Sbjct: 114 RYLTITKNNRWVSGIPVLCFWLCIPPFFGICFSSVIYFCLGSTDSLK 160


>AL117202-8|CAB57891.1|  547|Caenorhabditis elegans Hypothetical
           protein Y47D3A.11 protein.
          Length = 547

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 9/35 (25%), Positives = 19/35 (54%)
 Frame = -2

Query: 350 LPLKYIKSIKKHDTHNHEYTLLFVVKVCDRLPAFT 246
           +P  Y   ++++D   +  +  ++ K+C  LP FT
Sbjct: 343 MPADYPPLVREYDDRIYPISAYYIAKICSFLPIFT 377


>AF101305-6|AAF98598.1|  506|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein63 protein.
          Length = 506

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = -2

Query: 449 PLFTKIARTEEYEIFHTCREYREGVQNANIFLK 351
           P F KIA  E+Y   H    Y  G Q  N  LK
Sbjct: 88  PDFDKIAFEEDYSFIHQAVAYGFGSQTCNNILK 120


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,241,221
Number of Sequences: 27780
Number of extensions: 261206
Number of successful extensions: 624
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 624
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)