Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5799
         (691 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0626 + 4549661-4550947                                           28   8.0  
05_03_0254 + 11089236-11089290,11089366-11089415,11089530-110895...    28   8.0  
03_01_0652 + 4771551-4771821,4771931-4772038,4772744-4773024,477...    28   8.0  

>06_01_0626 + 4549661-4550947
          Length = 428

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 360 DIEECMKWLEQEEATLLGLDAGEVYVAGRYHSLVP 464
           ++E   +W E +   L+ L +G   VA  YHS  P
Sbjct: 317 ELEAPQEWTEMQHPHLVNLGSGRFCVARFYHSWTP 351


>05_03_0254 +
           11089236-11089290,11089366-11089415,11089530-11089562,
           11090601-11091674,11092245-11092728,11092857-11092882,
           11092883-11092993,11093082-11093171,11093251-11093322,
           11094043-11094153,11095086-11095143,11095605-11095804,
           11096666-11096818,11097134-11097334
          Length = 905

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +3

Query: 207 SIQRKEGQDLITWCTISALEQKKCEKLMKSSLQDKG 314
           SI  K  QD IT C +   E+KK E   +  +QD G
Sbjct: 207 SIDLKPLQDAITNCNVLLTERKKVEFKSRDLVQDLG 242


>03_01_0652 +
           4771551-4771821,4771931-4772038,4772744-4773024,
           4773115-4773369,4773451-4773563,4773640-4773735,
           4773844-4773997,4774380-4774697
          Length = 531

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1

Query: 349 LHCNSI*SFPKSPLSCKELFISFSHFFCSNADIVHHV 239
           +HC+ + S PKS      L     H +  +AD+VHH+
Sbjct: 476 IHCHPLRSGPKSVTHRPILPSVTKHIWHQHADLVHHI 512


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,278,904
Number of Sequences: 37544
Number of extensions: 381549
Number of successful extensions: 821
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)