Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5799
         (691 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341235-1|AAR13799.1|  196|Anopheles gambiae transferrin-like p...    37   5e-04
AY341234-1|AAR13798.1|  196|Anopheles gambiae transferrin-like p...    37   5e-04
AY341233-1|AAR13797.1|  196|Anopheles gambiae transferrin-like p...    37   5e-04
AY341232-1|AAR13796.1|  196|Anopheles gambiae transferrin-like p...    37   5e-04
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   9.1  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   9.1  

>AY341235-1|AAR13799.1|  196|Anopheles gambiae transferrin-like
           protein.
          Length = 196

 Score = 37.1 bits (82), Expect = 5e-04
 Identities = 27/101 (26%), Positives = 50/101 (49%)
 Frame = +3

Query: 372 CMKWLEQEEATLLGLDAGEVYVAGRYHSLVPILQELDGRGEPYQYSVAVVRKGGLPNIQP 551
           C++ +  + A   G+D+   Y+A + +    + QE +   E Y  SV V+ K G  + + 
Sbjct: 2   CLREISADRADFAGIDSNYGYLARQSNLAAALYQETEK--EKYS-SVVVLTKEGKGHDR- 57

Query: 552 GYGLQAMRGAKACFPSVGSLAGWVMPIHVLNARRWTEGTDC 674
               + +R AKACFP  G +A  +  ++V  +R   +  +C
Sbjct: 58  ---FEKLRNAKACFPEFGGIAS-IAFVNVGRSRGIFDRNEC 94


>AY341234-1|AAR13798.1|  196|Anopheles gambiae transferrin-like
           protein.
          Length = 196

 Score = 37.1 bits (82), Expect = 5e-04
 Identities = 27/101 (26%), Positives = 50/101 (49%)
 Frame = +3

Query: 372 CMKWLEQEEATLLGLDAGEVYVAGRYHSLVPILQELDGRGEPYQYSVAVVRKGGLPNIQP 551
           C++ +  + A   G+D+   Y+A + +    + QE +   E Y  SV V+ K G  + + 
Sbjct: 2   CLREISADRADFAGIDSNYGYLARQSNLAAALYQETEK--EKYS-SVVVLTKEGKGHDR- 57

Query: 552 GYGLQAMRGAKACFPSVGSLAGWVMPIHVLNARRWTEGTDC 674
               + +R AKACFP  G +A  +  ++V  +R   +  +C
Sbjct: 58  ---FEKLRNAKACFPEFGGIAS-IAFVNVGRSRGIFDRNEC 94


>AY341233-1|AAR13797.1|  196|Anopheles gambiae transferrin-like
           protein.
          Length = 196

 Score = 37.1 bits (82), Expect = 5e-04
 Identities = 27/101 (26%), Positives = 50/101 (49%)
 Frame = +3

Query: 372 CMKWLEQEEATLLGLDAGEVYVAGRYHSLVPILQELDGRGEPYQYSVAVVRKGGLPNIQP 551
           C++ +  + A   G+D+   Y+A + +    + QE +   E Y  SV V+ K G  + + 
Sbjct: 2   CLREISADRADFAGIDSNYGYLARQSNLAAALYQETEK--EKYS-SVVVLTKEGKGHDR- 57

Query: 552 GYGLQAMRGAKACFPSVGSLAGWVMPIHVLNARRWTEGTDC 674
               + +R AKACFP  G +A  +  ++V  +R   +  +C
Sbjct: 58  ---FEKLRNAKACFPEFGGIAS-IAFVNVGRSRGIFDRNEC 94


>AY341232-1|AAR13796.1|  196|Anopheles gambiae transferrin-like
           protein.
          Length = 196

 Score = 37.1 bits (82), Expect = 5e-04
 Identities = 27/101 (26%), Positives = 50/101 (49%)
 Frame = +3

Query: 372 CMKWLEQEEATLLGLDAGEVYVAGRYHSLVPILQELDGRGEPYQYSVAVVRKGGLPNIQP 551
           C++ +  + A   G+D+   Y+A + +    + QE +   E Y  SV V+ K G  + + 
Sbjct: 2   CLREISADRADFAGIDSNYGYLARQSNLAAALYQETEK--EKYS-SVVVLTKEGKGHDR- 57

Query: 552 GYGLQAMRGAKACFPSVGSLAGWVMPIHVLNARRWTEGTDC 674
               + +R AKACFP  G +A  +  ++V  +R   +  +C
Sbjct: 58  ---FEKLRNAKACFPEFGGIAS-IAFVNVGRSRGIFDRNEC 94


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/39 (23%), Positives = 20/39 (51%)
 Frame = +3

Query: 258 ALEQKKCEKLMKSSLQDKGLFGNDYIELQCKKAFDIEEC 374
           A  Q++C    +++L    ++  +  EL+C+    +E C
Sbjct: 341 AQAQRQCVFASEANLSYYSVYSRNNCELECEAKLILENC 379


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/39 (23%), Positives = 20/39 (51%)
 Frame = +3

Query: 258 ALEQKKCEKLMKSSLQDKGLFGNDYIELQCKKAFDIEEC 374
           A  Q++C    +++L    ++  +  EL+C+    +E C
Sbjct: 341 AQAQRQCVFASEANLSYYSVYSRNNCELECEAKLILENC 379


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 749,498
Number of Sequences: 2352
Number of extensions: 15860
Number of successful extensions: 33
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)