Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5799
         (691 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT004490-1|AAO42654.1|  819|Drosophila melanogaster LD22449p pro...   136   3e-32
AE014296-2160|AAF49900.1|  819|Drosophila melanogaster CG10620-P...   136   3e-32
AE013599-2223|AAF58039.1|  714|Drosophila melanogaster CG3666-PA...    45   8e-05
AF061268-1|AAC67389.1|  641|Drosophila melanogaster transferrin ...    40   0.002
AE014298-2709|AAF48831.1|  641|Drosophila melanogaster CG6186-PA...    40   0.003

>BT004490-1|AAO42654.1|  819|Drosophila melanogaster LD22449p
           protein.
          Length = 819

 Score =  136 bits (328), Expect = 3e-32
 Identities = 66/147 (44%), Positives = 95/147 (64%), Gaps = 1/147 (0%)
 Frame = +3

Query: 237 ITWCTISALEQKKCEKLMKSSLQDKGLFGNDYIELQCKKAFDIEECMKWLEQEEATLLGL 416
           + WCT S  EQ KC+ L  +  +D+ LF   ++ L C  A+  +EC+  +++E+A +  L
Sbjct: 33  MVWCTKSQAEQYKCQNLTVAIERDRALFDEVFLNLTCFMAYSADECIHHIDREKAHITTL 92

Query: 417 DAGEVYVAGRYHSLVPILQE-LDGRGEPYQYSVAVVRKGGLPNIQPGYGLQAMRGAKACF 593
           DAG+V+ AGRY+SL+PI+QE L+G    YQ SVAV++KG LP++     L+ MR  + CF
Sbjct: 93  DAGDVFTAGRYNSLIPIMQEKLEGGFADYQ-SVAVIKKGSLPDLN---NLRDMRNKRVCF 148

Query: 594 PSVGSLAGWVMPIHVLNARRWTEGTDC 674
           P VGSLAGW++PIH L      E  DC
Sbjct: 149 PWVGSLAGWIVPIHTLQREGGMEVVDC 175



 Score = 72.9 bits (171), Expect = 4e-13
 Identities = 46/146 (31%), Positives = 69/146 (47%)
 Frame = +3

Query: 237 ITWCTISALEQKKCEKLMKSSLQDKGLFGNDYIELQCKKAFDIEECMKWLEQEEATLLGL 416
           +T C  S  E  KC K M+++L+   L      EL CKK      CM+++E  +A +   
Sbjct: 450 MTLCVTSENELDKCIK-MRTALKAHLLKP----ELICKKMHSHINCMQFIEAGKADISVF 504

Query: 417 DAGEVYVAGRYHSLVPILQELDGRGEPYQYSVAVVRKGGLPNIQPGYGLQAMRGAKACFP 596
           DAG+VY  G  + LVP + E+   GEP  Y VAV ++       P   L  ++G   C  
Sbjct: 505 DAGDVYTGGLNYDLVPFMSEVYNLGEPEYYVVAVAKED-----DPDTELTYLKGKNTCHT 559

Query: 597 SVGSLAGWVMPIHVLNARRWTEGTDC 674
            + + AGW  P+ +  +  W     C
Sbjct: 560 GINTAAGWTYPMALFISNGWIRPYGC 585


>AE014296-2160|AAF49900.1|  819|Drosophila melanogaster CG10620-PA
           protein.
          Length = 819

 Score =  136 bits (328), Expect = 3e-32
 Identities = 66/147 (44%), Positives = 95/147 (64%), Gaps = 1/147 (0%)
 Frame = +3

Query: 237 ITWCTISALEQKKCEKLMKSSLQDKGLFGNDYIELQCKKAFDIEECMKWLEQEEATLLGL 416
           + WCT S  EQ KC+ L  +  +D+ LF   ++ L C  A+  +EC+  +++E+A +  L
Sbjct: 33  MVWCTKSQAEQYKCQNLTVAIERDRALFDEVFLNLTCFMAYSADECIHHIDREKAHITTL 92

Query: 417 DAGEVYVAGRYHSLVPILQE-LDGRGEPYQYSVAVVRKGGLPNIQPGYGLQAMRGAKACF 593
           DAG+V+ AGRY+SL+PI+QE L+G    YQ SVAV++KG LP++     L+ MR  + CF
Sbjct: 93  DAGDVFTAGRYNSLIPIMQEKLEGGFADYQ-SVAVIKKGSLPDLN---NLRDMRNKRVCF 148

Query: 594 PSVGSLAGWVMPIHVLNARRWTEGTDC 674
           P VGSLAGW++PIH L      E  DC
Sbjct: 149 PWVGSLAGWIVPIHTLQREGGMEVVDC 175



 Score = 72.9 bits (171), Expect = 4e-13
 Identities = 46/146 (31%), Positives = 69/146 (47%)
 Frame = +3

Query: 237 ITWCTISALEQKKCEKLMKSSLQDKGLFGNDYIELQCKKAFDIEECMKWLEQEEATLLGL 416
           +T C  S  E  KC K M+++L+   L      EL CKK      CM+++E  +A +   
Sbjct: 450 MTLCVTSENELDKCIK-MRTALKAHLLKP----ELICKKMHSHINCMQFIEAGKADISVF 504

Query: 417 DAGEVYVAGRYHSLVPILQELDGRGEPYQYSVAVVRKGGLPNIQPGYGLQAMRGAKACFP 596
           DAG+VY  G  + LVP + E+   GEP  Y VAV ++       P   L  ++G   C  
Sbjct: 505 DAGDVYTGGLNYDLVPFMSEVYNLGEPEYYVVAVAKED-----DPDTELTYLKGKNTCHT 559

Query: 597 SVGSLAGWVMPIHVLNARRWTEGTDC 674
            + + AGW  P+ +  +  W     C
Sbjct: 560 GINTAAGWTYPMALFISNGWIRPYGC 585


>AE013599-2223|AAF58039.1|  714|Drosophila melanogaster CG3666-PA
           protein.
          Length = 714

 Score = 45.2 bits (102), Expect = 8e-05
 Identities = 36/137 (26%), Positives = 65/137 (47%)
 Frame = +3

Query: 237 ITWCTISALEQKKCEKLMKSSLQDKGLFGNDYIELQCKKAFDIEECMKWLEQEEATLLGL 416
           I +CT S ++  KC  L ++S Q  G+  N    +QC +  D ++C+   + +E  ++ +
Sbjct: 370 IVFCTTSIIQHIKCSWLQEAS-QVYGVQPN----IQCVRTMDEQQCLDNTKFKETDVVLV 424

Query: 417 DAGEVYVAGRYHSLVPILQELDGRGEPYQYSVAVVRKGGLPNIQPGYGLQAMRGAKACFP 596
           D      A R ++LVP+L E          ++A+V K            + ++GA+AC P
Sbjct: 425 DQEMRVKAQRDYNLVPLLYEFAADMHDRYVTIALVHKDA-----KFESFRDLKGARACLP 479

Query: 597 SVGSLAGWVMPIHVLNA 647
           S    A   +   ++NA
Sbjct: 480 SFEGAAHLSVQETIVNA 496


>AF061268-1|AAC67389.1|  641|Drosophila melanogaster transferrin
           precursor protein.
          Length = 641

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 25/105 (23%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
 Frame = +3

Query: 333 IELQCKKAFDIEECMKWLEQEEATLLGLDAGEVYVA----GRYHSLVPILQELDGRGEPY 500
           I ++C    D  +C++ +EQ +A +L  +  ++Y+A       + ++  ++    +   +
Sbjct: 58  IRMECVAGRDRVDCLELIEQRKADVLATEPEDMYIAYHRKNEDYRVISEIRTQQDKNAAF 117

Query: 501 QY-SVAVVRKGGLPNIQPGYGLQAMRGAKACFPSVGSLAGWVMPI 632
           +Y  + +V+K       P   LQ +RGAK+C    G   G+ +PI
Sbjct: 118 RYEGIILVKKD-----SPIRTLQQLRGAKSCHTGFGRNVGYKIPI 157


>AE014298-2709|AAF48831.1|  641|Drosophila melanogaster CG6186-PA
           protein.
          Length = 641

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 25/105 (23%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
 Frame = +3

Query: 333 IELQCKKAFDIEECMKWLEQEEATLLGLDAGEVYVA----GRYHSLVPILQELDGRGEPY 500
           I ++C    D  +C++ +EQ +A +L  +  ++Y+A       + ++  ++    +   +
Sbjct: 58  IRMECVAGRDRVDCLELIEQRKADVLATEPEDMYIAYHRKNEDYRVISEIRTQQDKDAAF 117

Query: 501 QY-SVAVVRKGGLPNIQPGYGLQAMRGAKACFPSVGSLAGWVMPI 632
           +Y  + +V+K       P   LQ +RGAK+C    G   G+ +PI
Sbjct: 118 RYEGIILVKKD-----SPIRTLQQLRGAKSCHTGFGRNVGYKIPI 157


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,004,544
Number of Sequences: 53049
Number of extensions: 656216
Number of successful extensions: 1277
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1271
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)