Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5799
(691 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 54 2e-09
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 54 2e-09
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 54 2e-09
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 23 2.1
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 23 2.7
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 23 3.6
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 6.3
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 6.3
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 22 6.3
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 53.6 bits (123), Expect = 2e-09
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 7/162 (4%)
Frame = +3
Query: 186 ENVNKIGSIQRKEG--QDLITWCTISALEQKKCEKLMKSSLQDKGLFGNDYI-ELQCKKA 356
+N + I+R G +I WCT S + +KC+ L +++ + D + C
Sbjct: 367 KNAKYLDVIERNSGATDKIIRWCTWSEGDLEKCKALTRAA------YSRDVRPKYDCTLE 420
Query: 357 FDIEECMKWLEQEEATLLGLDAGEVYVAGRYHSLVPILQELDGRGEP---YQYSVAVVRK 527
++C+K +++ A L + G V A + ++ VPI+ E G G + +VAVV K
Sbjct: 421 KSQDDCLKAIKENNADLTVVSGGSVLRATKEYNTVPIIAESYGSGSTNFNERPAVAVVSK 480
Query: 528 GGLPNIQPGYGLQAMRGAKACFPSV-GSLAGWVMPIHVLNAR 650
N L+ +R K+C S AGW PI+ L +
Sbjct: 481 SSSIN-----KLEDLRNKKSCHSGYKDSFAGWTAPIYTLKRK 517
Score = 46.4 bits (105), Expect = 3e-07
Identities = 40/147 (27%), Positives = 75/147 (51%), Gaps = 9/147 (6%)
Frame = +3
Query: 234 LITWCTISALEQKKCEKLMKSSLQDKGLFGNDYIELQCKKAFDIEECMKWLEQEEATLLG 413
+ T C + + K+C+++ K S KG I + C D EC++ + ++EA ++
Sbjct: 33 IFTIC-VPEIYSKECDEMKKDSAV-KG------IPVSCISGRDRYECIEKVGKKEADVVA 84
Query: 414 LDAGEVYVAGRYHSLVP-----ILQELDGRGEP---YQY-SVAVVRKGGLPNIQPGYGLQ 566
+D ++Y+A + + L +++++ + EP Y+Y +VAV+ K P +Q
Sbjct: 85 VDPEDMYLAVKDNKLASNAGYNVIEQVRTKEEPHAPYRYEAVAVIHKD-----LPINNVQ 139
Query: 567 AMRGAKACFPSVGSLAGWVMPIHVLNA 647
+RG K+C VG G+ +PI L A
Sbjct: 140 GLRGLKSCHTGVGRNVGYKIPITKLTA 166
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 53.6 bits (123), Expect = 2e-09
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 7/162 (4%)
Frame = +3
Query: 186 ENVNKIGSIQRKEG--QDLITWCTISALEQKKCEKLMKSSLQDKGLFGNDYI-ELQCKKA 356
+N + I+R G +I WCT S + +KC+ L +++ + D + C
Sbjct: 367 KNAKYLDVIERNSGATDKIIRWCTWSEGDLEKCKALTRAA------YSRDVRPKYDCTLE 420
Query: 357 FDIEECMKWLEQEEATLLGLDAGEVYVAGRYHSLVPILQELDGRGEP---YQYSVAVVRK 527
++C+K +++ A L + G V A + ++ VPI+ E G G + +VAVV K
Sbjct: 421 KSQDDCLKAIKENNADLTVVSGGSVLRATKEYNTVPIIAESYGSGSTNFNERPAVAVVSK 480
Query: 528 GGLPNIQPGYGLQAMRGAKACFPSV-GSLAGWVMPIHVLNAR 650
N L+ +R K+C S AGW PI+ L +
Sbjct: 481 SSSIN-----KLEDLRNKKSCHSGYKDSFAGWTAPIYTLKRK 517
Score = 46.4 bits (105), Expect = 3e-07
Identities = 40/147 (27%), Positives = 75/147 (51%), Gaps = 9/147 (6%)
Frame = +3
Query: 234 LITWCTISALEQKKCEKLMKSSLQDKGLFGNDYIELQCKKAFDIEECMKWLEQEEATLLG 413
+ T C + + K+C+++ K S KG I + C D EC++ + ++EA ++
Sbjct: 33 IFTIC-VPEIYSKECDEMKKDSAV-KG------IPVSCISGRDRYECIEKVGKKEADVVA 84
Query: 414 LDAGEVYVAGRYHSLVP-----ILQELDGRGEP---YQY-SVAVVRKGGLPNIQPGYGLQ 566
+D ++Y+A + + L +++++ + EP Y+Y +VAV+ K P +Q
Sbjct: 85 VDPEDMYLAVKDNKLASNAGYNVIEQVRTKEEPHAPYRYEAVAVIHKD-----LPINNVQ 139
Query: 567 AMRGAKACFPSVGSLAGWVMPIHVLNA 647
+RG K+C VG G+ +PI L A
Sbjct: 140 GLRGLKSCHTGVGRNVGYKIPITKLTA 166
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 53.6 bits (123), Expect = 2e-09
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 7/162 (4%)
Frame = +3
Query: 186 ENVNKIGSIQRKEG--QDLITWCTISALEQKKCEKLMKSSLQDKGLFGNDYI-ELQCKKA 356
+N + I+R G +I WCT S + +KC+ L +++ + D + C
Sbjct: 367 KNAKYLDVIERNSGATDKIIRWCTWSEGDLEKCKALTRAA------YSRDVRPKYDCTLE 420
Query: 357 FDIEECMKWLEQEEATLLGLDAGEVYVAGRYHSLVPILQELDGRGEP---YQYSVAVVRK 527
++C+K +++ A L + G V A + ++ VPI+ E G G + +VAVV K
Sbjct: 421 KSQDDCLKAIKENNADLTVVSGGSVLRATKEYNTVPIIAESYGSGSTNFNERPAVAVVSK 480
Query: 528 GGLPNIQPGYGLQAMRGAKACFPSV-GSLAGWVMPIHVLNAR 650
N L+ +R K+C S AGW PI+ L +
Sbjct: 481 SSSIN-----KLEDLRNKKSCHSGYKDSFAGWTAPIYTLKRK 517
Score = 46.4 bits (105), Expect = 3e-07
Identities = 40/147 (27%), Positives = 75/147 (51%), Gaps = 9/147 (6%)
Frame = +3
Query: 234 LITWCTISALEQKKCEKLMKSSLQDKGLFGNDYIELQCKKAFDIEECMKWLEQEEATLLG 413
+ T C + + K+C+++ K S KG I + C D EC++ + ++EA ++
Sbjct: 33 IFTIC-VPEIYSKECDEMKKDSAV-KG------IPVSCISGRDRYECIEKVGKKEADVVA 84
Query: 414 LDAGEVYVAGRYHSLVP-----ILQELDGRGEP---YQY-SVAVVRKGGLPNIQPGYGLQ 566
+D ++Y+A + + L +++++ + EP Y+Y +VAV+ K P +Q
Sbjct: 85 VDPEDMYLAVKDNKLASNAGYNVIEQVRTKEEPHAPYRYEAVAVIHKD-----LPINNVQ 139
Query: 567 AMRGAKACFPSVGSLAGWVMPIHVLNA 647
+RG K+C VG G+ +PI L A
Sbjct: 140 GLRGLKSCHTGVGRNVGYKIPITKLTA 166
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 23.4 bits (48), Expect = 2.1
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +3
Query: 468 LQELDGRGEPYQYSVAVVRKGGLPNIQPGYGLQAMRG 578
L + D G PY+ V R+G +Q + LQ G
Sbjct: 209 LSQFDLMGSPYRNLTFVRREGEFSVLQVSFNLQRHTG 245
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 23.0 bits (47), Expect = 2.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -1
Query: 343 CNSI*SFPKSPLSCKELFISFSHF 272
C SI + +SC E+ ++F+HF
Sbjct: 178 CISILAIKVYYISCPEISVNFAHF 201
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 22.6 bits (46), Expect = 3.6
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 586 PAFLVSGHWQD 618
P F SGHWQD
Sbjct: 233 PNFPSSGHWQD 243
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/19 (42%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
Frame = -2
Query: 90 TLHNNK-FKFHSKHIYFRI 37
T+HNN +K ++K +Y+ I
Sbjct: 322 TIHNNNNYKNYNKKLYYNI 340
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.8 bits (44), Expect = 6.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 339 LQCKKAFDIEECMKWLEQ 392
+QC K DIEE +K E+
Sbjct: 145 IQCVKKKDIEEALKIREE 162
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.8 bits (44), Expect = 6.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 339 LQCKKAFDIEECMKWLEQ 392
+QC K DIEE +K E+
Sbjct: 145 IQCVKKKDIEEALKIREE 162
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,807
Number of Sequences: 438
Number of extensions: 4506
Number of successful extensions: 26
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -