Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5793
         (390 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC009973-1|AAH09973.1|  650|Homo sapiens dihydrouridine synthase...    29   5.3  
BC008362-1|AAH08362.1|  613|Homo sapiens DUS3L protein protein.        29   5.3  
BC004549-1|AAH04549.1|  408|Homo sapiens DUS3L protein protein.        29   5.3  
AL365411-1|CAB96955.1|  465|Homo sapiens hypothetical protein, s...    29   5.3  
AK023958-1|BAB14740.1|  650|Homo sapiens protein ( Homo sapiens ...    29   5.3  
AF091072-1|AAC72941.1|  223|Homo sapiens unknown protein.              29   5.3  

>BC009973-1|AAH09973.1|  650|Homo sapiens dihydrouridine synthase
           3-like (S. cerevisiae) protein.
          Length = 650

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +2

Query: 260 RIVEPSYVGMNNEYRISLA-KKGGGCPIMNIHSEY 361
           R VE  +V +N    I L  KKGGGC +MN  +++
Sbjct: 383 RTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKF 417


>BC008362-1|AAH08362.1|  613|Homo sapiens DUS3L protein protein.
          Length = 613

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +2

Query: 260 RIVEPSYVGMNNEYRISLA-KKGGGCPIMNIHSEY 361
           R VE  +V +N    I L  KKGGGC +MN  +++
Sbjct: 346 RTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKF 380


>BC004549-1|AAH04549.1|  408|Homo sapiens DUS3L protein protein.
          Length = 408

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +2

Query: 260 RIVEPSYVGMNNEYRISLA-KKGGGCPIMNIHSEY 361
           R VE  +V +N    I L  KKGGGC +MN  +++
Sbjct: 141 RTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKF 175


>AL365411-1|CAB96955.1|  465|Homo sapiens hypothetical protein,
           similar to (AF091072.1) predicted protein [Homo sapiens]
           protein.
          Length = 465

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +2

Query: 260 RIVEPSYVGMNNEYRISLA-KKGGGCPIMNIHSEY 361
           R VE  +V +N    I L  KKGGGC +MN  +++
Sbjct: 366 RTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKF 400


>AK023958-1|BAB14740.1|  650|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13896 fis, clone THYRO1001703, weakly similar to
           NIFR3-LIKE PROTEIN. ).
          Length = 650

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +2

Query: 260 RIVEPSYVGMNNEYRISLA-KKGGGCPIMNIHSEY 361
           R VE  +V +N    I L  KKGGGC +MN  +++
Sbjct: 383 RTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKF 417


>AF091072-1|AAC72941.1|  223|Homo sapiens unknown protein.
          Length = 223

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +2

Query: 260 RIVEPSYVGMNNEYRISLA-KKGGGCPIMNIHSEY 361
           R VE  +V +N    I L  KKGGGC +MN  +++
Sbjct: 7   RTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKF 41


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,582,609
Number of Sequences: 237096
Number of extensions: 1435790
Number of successful extensions: 3454
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3454
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2698607930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)