Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5793
(390 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical... 31 0.38
Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical pr... 29 0.88
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 29 0.88
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 29 0.88
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 29 0.88
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z83113-2|CAB05544.1| 479|Caenorhabditis elegans Hypothetical pr... 28 2.0
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 28 2.0
U64848-9|AAB04887.1| 128|Caenorhabditis elegans Hypothetical pr... 28 2.7
U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z99710-9|CAN99658.1| 402|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z99710-8|CAB16868.1| 383|Caenorhabditis elegans Hypothetical pr... 27 3.6
U39666-3|AAA80410.2| 178|Caenorhabditis elegans Hypothetical pr... 27 3.6
EF015633-1|ABK20307.1| 383|Caenorhabditis elegans alpha 1,2-fuc... 27 3.6
AL110477-5|CAB54329.1| 314|Caenorhabditis elegans Hypothetical ... 27 3.6
Z70270-2|CAA94228.1| 445|Caenorhabditis elegans Hypothetical pr... 27 4.7
Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical pr... 27 6.2
AL031633-19|CAA21031.1| 710|Caenorhabditis elegans Hypothetical... 27 6.2
AF067613-14|ABA54416.1| 395|Caenorhabditis elegans Hypothetical... 27 6.2
U23520-3|AAC46555.2| 470|Caenorhabditis elegans Hypothetical pr... 26 8.2
U23520-2|AAR25655.1| 485|Caenorhabditis elegans Hypothetical pr... 26 8.2
>AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical
protein Y38H6C.17 protein.
Length = 454
Score = 30.7 bits (66), Expect = 0.38
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 369 ELVYSLWMFMIGQPPPFLARLILYSLFMP 283
E + +W F+ G PPPF +++ F+P
Sbjct: 151 EHIIEIWQFIAGSPPPFSKIVLILMYFVP 179
>Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical
protein C03E10.5 protein.
Length = 623
Score = 29.5 bits (63), Expect = 0.88
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +3
Query: 57 SSTGAAKSFCVKLGPVLLRTASPL*TTIM*WTCTSLPTSNPHAPTGATSSSLNTLLGGKK 236
SST + S + + T++P T T TS PTS + T A ++ +
Sbjct: 162 SSTASVSSTILSSTATTMVTSTPT-TEKSSTTTTSTPTSEATSTTTAMITTTSGTTENPT 220
Query: 237 TT-CPTK*SELWSHPT 281
TT CPTK HPT
Sbjct: 221 TTDCPTKVCRYGFHPT 236
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 29.5 bits (63), Expect = 0.88
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -3
Query: 265 NSDYFVGHVVF-FPPKSVLSEELVAPVGACGFEVGNEVHVHHIMVVYNGEAVLNKTGPSF 89
NS YFVGH F F +S ++++A V A + G V + +V N E++ S
Sbjct: 1478 NSPYFVGHTAFAFVDESDTVDDVLATVTAFDKDRGENGIVTYSIVSGNEESLFKIDAKSG 1537
Query: 88 TQKLFAAPVD 59
+L A P+D
Sbjct: 1538 EVRL-AKPLD 1546
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 29.5 bits (63), Expect = 0.88
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -3
Query: 265 NSDYFVGHVVF-FPPKSVLSEELVAPVGACGFEVGNEVHVHHIMVVYNGEAVLNKTGPSF 89
NS YFVGH F F +S ++++A V A + G V + +V N E++ S
Sbjct: 1478 NSPYFVGHTAFAFVDESDTVDDVLATVTAFDKDRGENGIVTYSIVSGNEESLFKIDAKSG 1537
Query: 88 TQKLFAAPVD 59
+L A P+D
Sbjct: 1538 EVRL-AKPLD 1546
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 29.5 bits (63), Expect = 0.88
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -3
Query: 265 NSDYFVGHVVF-FPPKSVLSEELVAPVGACGFEVGNEVHVHHIMVVYNGEAVLNKTGPSF 89
NS YFVGH F F +S ++++A V A + G V + +V N E++ S
Sbjct: 1478 NSPYFVGHTAFAFVDESDTVDDVLATVTAFDKDRGENGIVTYSIVSGNEESLFKIDAKSG 1537
Query: 88 TQKLFAAPVD 59
+L A P+D
Sbjct: 1538 EVRL-AKPLD 1546
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 29.1 bits (62), Expect = 1.2
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = +3
Query: 150 TCTSLPTSNPHAPTGATSSSLNTLLGGKKTTCPTK*SELWSHPT 281
T TSLP+S+P T + SSS T + TT K S L S T
Sbjct: 1988 TQTSLPSSSPSPSTHSVSSSEGTTMSSGATTSGDKMSFLSSTGT 2031
>Z83113-2|CAB05544.1| 479|Caenorhabditis elegans Hypothetical
protein K08H10.4 protein.
Length = 479
Score = 28.3 bits (60), Expect = 2.0
Identities = 19/84 (22%), Positives = 33/84 (39%)
Frame = -3
Query: 385 HKRLERVGVLAVDVHDWAAAALFSQTNSVFVVHAHVGWLHNSDYFVGHVVFFPPKSVLSE 206
HK V A D+ + + N V HVG+ + D+F H+ F + +
Sbjct: 195 HKPAAHRSVAAFDLGGGSTQLTYWPNNEA-VFSEHVGYERDIDFFGHHIRLFTHSFLGNG 253
Query: 205 ELVAPVGACGFEVGNEVHVHHIMV 134
+ A + E NE+ H ++
Sbjct: 254 LIAARLNILQLETDNEIESTHQLI 277
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 28.3 bits (60), Expect = 2.0
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = +3
Query: 114 TASPL*TTIM*WTCTSLPTSNPHAPTGATSSSLNTLLGGKKTTCPTK*SELWSHPTWA*T 293
T +P TT T T+ PT+ APT T++ T TT T + + PT T
Sbjct: 172 TTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTT--TPTTTTTVPTTTTTTPTTTTT 229
Query: 294 TNT 302
T T
Sbjct: 230 TTT 232
Score = 26.6 bits (56), Expect = 6.2
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +3
Query: 114 TASPL*TTIM*WTCTSLPTSNPHAPTGATSS-SLNTLLGGKKTTCPTK*SELWSHPTWA* 290
T +P TT T T+ PT+ PT T++ + T TT PT + + T
Sbjct: 151 TTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTP 210
Query: 291 TTNT 302
TT T
Sbjct: 211 TTTT 214
Score = 26.2 bits (55), Expect = 8.2
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +3
Query: 114 TASPL*TTIM*WTCTSLPTSNPHAPTGATSS-SLNTLLGGKKTTCPTK*SELWSHPTWA* 290
T +P TT T T+ PT+ PT T++ + T TT PT + + T
Sbjct: 158 TTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVP 217
Query: 291 TTNT 302
TT T
Sbjct: 218 TTTT 221
>U64848-9|AAB04887.1| 128|Caenorhabditis elegans Hypothetical
protein C50E3.3 protein.
Length = 128
Score = 27.9 bits (59), Expect = 2.7
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -2
Query: 188 WGVWV*GWQRGTRPSHNGRLQWGSCPQQNGSKFHAKTLCRSS 63
WGVW GTR + G + C G KF+ KTL S
Sbjct: 24 WGVWF----DGTRKTKCGPSELTQCNSLKGFKFNDKTLVSKS 61
>U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical
protein F37A4.4 protein.
Length = 1163
Score = 27.9 bits (59), Expect = 2.7
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -1
Query: 387 FTNDSNELVYSLWMFMIGQPPPFLARLILYSLFMPT*DGSTILITS 250
FT++ +L+++ G+ + R YSLFM DG +LI S
Sbjct: 787 FTSNGRNQYINLYLYYFGKTSDYEKRW-RYSLFMDRVDGKNVLIDS 831
>Z99710-9|CAN99658.1| 402|Caenorhabditis elegans Hypothetical
protein F08A8.5b protein.
Length = 402
Score = 27.5 bits (58), Expect = 3.6
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 193 PVGACGFEVGNEVHVHHIMVVYNGEAVLNKTGPSFTQKL 77
P G G ++ + +H I +AV+N T PSF + L
Sbjct: 91 PSGGLGNKLFEIISLHGIATSLQRKAVINATNPSFIETL 129
>Z99710-8|CAB16868.1| 383|Caenorhabditis elegans Hypothetical
protein F08A8.5a protein.
Length = 383
Score = 27.5 bits (58), Expect = 3.6
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 193 PVGACGFEVGNEVHVHHIMVVYNGEAVLNKTGPSFTQKL 77
P G G ++ + +H I +AV+N T PSF + L
Sbjct: 72 PSGGLGNKLFEIISLHGIATSLQRKAVINATNPSFIETL 110
>U39666-3|AAA80410.2| 178|Caenorhabditis elegans Hypothetical
protein K04E7.1 protein.
Length = 178
Score = 27.5 bits (58), Expect = 3.6
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -3
Query: 322 LFSQTNSVFVVHAHVGWLHNSDYFVGHVVFFPPKSVLSEELVAPVGACG 176
L++ + V+V ++ WLH S G+V FP + L LV CG
Sbjct: 45 LYAVSFVVYVTNSICSWLHISFVVKGYVTSFPLNTWLVVSLVV-TAVCG 92
>EF015633-1|ABK20307.1| 383|Caenorhabditis elegans alpha
1,2-fucosyltransferase protein.
Length = 383
Score = 27.5 bits (58), Expect = 3.6
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 193 PVGACGFEVGNEVHVHHIMVVYNGEAVLNKTGPSFTQKL 77
P G G ++ + +H I +AV+N T PSF + L
Sbjct: 72 PSGGLGNKLFEIISLHGIATSLQRKAVINATNPSFIETL 110
>AL110477-5|CAB54329.1| 314|Caenorhabditis elegans Hypothetical
protein Y113G7B.7 protein.
Length = 314
Score = 27.5 bits (58), Expect = 3.6
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +2
Query: 233 EDYVPHEVIRIVEPSYVGMNN 295
+D + EV+R+ +PSY+G +N
Sbjct: 268 DDEIEPEVVRLFDPSYIGNDN 288
>Z70270-2|CAA94228.1| 445|Caenorhabditis elegans Hypothetical
protein C53D6.3 protein.
Length = 445
Score = 27.1 bits (57), Expect = 4.7
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -3
Query: 307 NSVFVVHAHVGWLHNSDYFVGHVVFFPPKSVLSEELVAPVGACGFEVGN 161
NS F+ ++ V +HNS + ++ FP +V+ V G C ++ N
Sbjct: 136 NSCFI-NSKVAQIHNSPFRSVFLMLFPNGTVMVNYRVRVKGPCSLDLSN 183
>Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical
protein H32K16.1 protein.
Length = 481
Score = 26.6 bits (56), Expect = 6.2
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -1
Query: 369 ELVYSLWMFMIGQPPPFLARLILYSLFMP 283
E V +W F PPPF +++ F+P
Sbjct: 179 EHVIEIWEFFADSPPPFSKCVMILMYFVP 207
>AL031633-19|CAA21031.1| 710|Caenorhabditis elegans Hypothetical
protein Y39A1A.22 protein.
Length = 710
Score = 26.6 bits (56), Expect = 6.2
Identities = 16/72 (22%), Positives = 31/72 (43%)
Frame = +2
Query: 2 KLTLFKEIRSVKPDTMKLIVNWSGKEFLRETWTRFVEDSFPIVNDHYVMDVYLVANLKPT 181
+L +FK++ + DT + + GK+ + TR E + + + + LV N +
Sbjct: 86 ELQVFKDVLGSRSDTTGIRRRFGGKDKFHKETTR-NEQQLKLAFSEFYLSLVLVQNFQQL 144
Query: 182 RPNRCYKFLAQH 217
K L +H
Sbjct: 145 NATGFRKILKKH 156
>AF067613-14|ABA54416.1| 395|Caenorhabditis elegans Hypothetical
protein F56D6.15 protein.
Length = 395
Score = 26.6 bits (56), Expect = 6.2
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +3
Query: 147 WTCTSLPTSNPHA--PTGATSSSLNTLLGGKKT 239
+ C+ PT P A PT T++++N LGG++T
Sbjct: 116 FVCSYDPTVQPKATTPTTTTAANVNCPLGGQQT 148
>U23520-3|AAC46555.2| 470|Caenorhabditis elegans Hypothetical
protein C35B8.3a protein.
Length = 470
Score = 26.2 bits (55), Expect = 8.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 155 YLVANLKPTRPNRCYKFLAQHALRWEEDYVPHEVIRIV 268
+L+ L+ R + C K L LRWE+ + P +I+ V
Sbjct: 392 HLINELEFAR-DECIKELKLTGLRWEQAFTPEALIQCV 428
>U23520-2|AAR25655.1| 485|Caenorhabditis elegans Hypothetical
protein C35B8.3b protein.
Length = 485
Score = 26.2 bits (55), Expect = 8.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 155 YLVANLKPTRPNRCYKFLAQHALRWEEDYVPHEVIRIV 268
+L+ L+ R + C K L LRWE+ + P +I+ V
Sbjct: 407 HLINELEFAR-DECIKELKLTGLRWEQAFTPEALIQCV 443
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,994,706
Number of Sequences: 27780
Number of extensions: 222014
Number of successful extensions: 649
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 642
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 587646290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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