Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5792
         (311 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ256727-1|ABB69068.1|  254|Homo sapiens RNA binding motif and E...    28   6.7  
DQ256726-1|ABB69067.1|  185|Homo sapiens RNA binding motif and E...    28   6.7  
BC112324-1|AAI12325.1|  381|Homo sapiens RBED1 protein protein.        28   6.7  
BC018666-1|AAH18666.1|  391|Homo sapiens RNA binding motif and E...    28   6.7  
BC010991-1|AAH10991.1|  381|Homo sapiens RBED1 protein protein.        28   6.7  
BC001942-1|AAH01942.1|  391|Homo sapiens RNA binding motif and E...    28   6.7  
AL713718-1|CAD28512.1|  151|Homo sapiens hypothetical protein pr...    28   6.7  
AK025630-1|BAB15195.1|  381|Homo sapiens protein ( Homo sapiens ...    28   6.7  
AF258573-1|AAG23776.1|  161|Homo sapiens PP4068 protein.               28   6.7  
AC062037-2|AAY24127.1|  391|Homo sapiens unknown protein.              28   6.7  

>DQ256727-1|ABB69068.1|  254|Homo sapiens RNA binding motif and ELMO
           domain 1 protein.
          Length = 254

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 89  GVPVLILKWHAI*RELCTYCYEWKSTV 169
           G+P+  LK H I + L T  YEW+  V
Sbjct: 41  GIPISELKNHGILQALTTEAYEWEPRV 67


>DQ256726-1|ABB69067.1|  185|Homo sapiens RNA binding motif and ELMO
           domain 1 protein.
          Length = 185

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 89  GVPVLILKWHAI*RELCTYCYEWKSTV 169
           G+P+  LK H I + L T  YEW+  V
Sbjct: 41  GIPISELKNHGILQALTTEAYEWEPRV 67


>BC112324-1|AAI12325.1|  381|Homo sapiens RBED1 protein protein.
          Length = 381

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 89  GVPVLILKWHAI*RELCTYCYEWKSTV 169
           G+P+  LK H I + L T  YEW+  V
Sbjct: 41  GIPISELKNHGILQALTTEAYEWEPRV 67


>BC018666-1|AAH18666.1|  391|Homo sapiens RNA binding motif and
           ELMO/CED-12 domain 1 protein.
          Length = 391

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 89  GVPVLILKWHAI*RELCTYCYEWKSTV 169
           G+P+  LK H I + L T  YEW+  V
Sbjct: 41  GIPISELKNHGILQALTTEAYEWEPRV 67


>BC010991-1|AAH10991.1|  381|Homo sapiens RBED1 protein protein.
          Length = 381

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 89  GVPVLILKWHAI*RELCTYCYEWKSTV 169
           G+P+  LK H I + L T  YEW+  V
Sbjct: 41  GIPISELKNHGILQALTTEAYEWEPRV 67


>BC001942-1|AAH01942.1|  391|Homo sapiens RNA binding motif and
           ELMO/CED-12 domain 1 protein.
          Length = 391

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 89  GVPVLILKWHAI*RELCTYCYEWKSTV 169
           G+P+  LK H I + L T  YEW+  V
Sbjct: 41  GIPISELKNHGILQALTTEAYEWEPRV 67


>AL713718-1|CAD28512.1|  151|Homo sapiens hypothetical protein
           protein.
          Length = 151

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 89  GVPVLILKWHAI*RELCTYCYEWKSTV 169
           G+P+  LK H I + L T  YEW+  V
Sbjct: 7   GIPISELKNHGILQALTTEAYEWEPRV 33


>AK025630-1|BAB15195.1|  381|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21977 fis, clone HEP05976. ).
          Length = 381

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 89  GVPVLILKWHAI*RELCTYCYEWKSTV 169
           G+P+  LK H I + L T  YEW+  V
Sbjct: 41  GIPISELKNHGILQALTTEAYEWEPRV 67


>AF258573-1|AAG23776.1|  161|Homo sapiens PP4068 protein.
          Length = 161

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 89  GVPVLILKWHAI*RELCTYCYEWKSTV 169
           G+P+  LK H I + L T  YEW+  V
Sbjct: 41  GIPISELKNHGILQALTTEAYEWEPRV 67


>AC062037-2|AAY24127.1|  391|Homo sapiens unknown protein.
          Length = 391

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 89  GVPVLILKWHAI*RELCTYCYEWKSTV 169
           G+P+  LK H I + L T  YEW+  V
Sbjct: 41  GIPISELKNHGILQALTTEAYEWEPRV 67


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,049,546
Number of Sequences: 237096
Number of extensions: 679767
Number of successful extensions: 832
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 832
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1459139350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)