BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5783
(584 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC112273-1|AAI12274.1| 830|Homo sapiens kinesin family member 7... 34 0.42
BC112271-1|AAI12272.1| 830|Homo sapiens kinesin family member 7... 34 0.42
BC104044-1|AAI04045.1| 830|Homo sapiens kinesin family member 7... 34 0.42
BC040878-1|AAH40878.1| 468|Homo sapiens KIF7 protein protein. 34 0.42
AY358384-1|AAQ88750.1| 830|Homo sapiens EQYK340 protein. 34 0.42
X05562-1|CAA29076.1| 1043|Homo sapiens protein ( Human mRNA for ... 31 4.0
AL161773-3|CAH71366.2| 1712|Homo sapiens collagen type IV alpha ... 31 4.0
AL159153-1|CAH72050.2| 1712|Homo sapiens collagen type IV alpha ... 31 4.0
AL139385-2|CAI17005.2| 1712|Homo sapiens collagen type IV alpha ... 31 4.0
BC113946-1|AAI13947.1| 180|Homo sapiens interleukin 17B protein. 29 9.1
BC113925-1|AAI13926.1| 180|Homo sapiens interleukin 17B protein. 29 9.1
AY358931-1|AAQ89290.1| 180|Homo sapiens IL17 B protein. 29 9.1
AF386077-1|AAK60336.1| 180|Homo sapiens interleukin 17B protein. 29 9.1
AF218727-1|AAG44136.1| 180|Homo sapiens neuronal interleukin-17... 29 9.1
AF212311-1|AAF78775.1| 180|Homo sapiens interleukin 20 protein. 29 9.1
AF184969-1|AAF01318.1| 180|Homo sapiens cytokine-like protein Z... 29 9.1
AF152098-1|AAF28104.1| 180|Homo sapiens interleukin 17B protein. 29 9.1
AF110385-1|AAG39637.1| 180|Homo sapiens interleukin-17 beta pro... 29 9.1
>BC112273-1|AAI12274.1| 830|Homo sapiens kinesin family member 7
protein.
Length = 830
Score = 33.9 bits (74), Expect = 0.42
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +2
Query: 251 LDVLGRTRATLKESACSPWPRGPGNPLKLLRAGDWGLQLSPIKRGIPSKRES*ARVDYVP 430
++ +G +R K S CS + PGN +L A + L LSP+ G P RE + + P
Sbjct: 701 VNAVGHSRGGEKRSLCSEGRQAPGNEDELHLAPEL-LWLSPLTEGAPRTREETRDLVHAP 759
Query: 431 ALCTHRPSLL 460
T + S L
Sbjct: 760 LPLTWKRSSL 769
>BC112271-1|AAI12272.1| 830|Homo sapiens kinesin family member 7
protein.
Length = 830
Score = 33.9 bits (74), Expect = 0.42
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +2
Query: 251 LDVLGRTRATLKESACSPWPRGPGNPLKLLRAGDWGLQLSPIKRGIPSKRES*ARVDYVP 430
++ +G +R K S CS + PGN +L A + L LSP+ G P RE + + P
Sbjct: 701 VNAVGHSRGGEKRSLCSEGRQAPGNEDELHLAPEL-LWLSPLTEGAPRTREETRDLVHAP 759
Query: 431 ALCTHRPSLL 460
T + S L
Sbjct: 760 LPLTWKRSSL 769
>BC104044-1|AAI04045.1| 830|Homo sapiens kinesin family member 7
protein.
Length = 830
Score = 33.9 bits (74), Expect = 0.42
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +2
Query: 251 LDVLGRTRATLKESACSPWPRGPGNPLKLLRAGDWGLQLSPIKRGIPSKRES*ARVDYVP 430
++ +G +R K S CS + PGN +L A + L LSP+ G P RE + + P
Sbjct: 701 VNAVGHSRGGEKRSLCSEGRQAPGNEDELHLAPEL-LWLSPLTEGAPRTREETRDLVHAP 759
Query: 431 ALCTHRPSLL 460
T + S L
Sbjct: 760 LPLTWKRSSL 769
>BC040878-1|AAH40878.1| 468|Homo sapiens KIF7 protein protein.
Length = 468
Score = 33.9 bits (74), Expect = 0.42
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +2
Query: 251 LDVLGRTRATLKESACSPWPRGPGNPLKLLRAGDWGLQLSPIKRGIPSKRES*ARVDYVP 430
++ +G +R K S CS + PGN +L A + L LSP+ G P RE + + P
Sbjct: 339 VNAVGHSRGGEKRSLCSEGRQAPGNEDELHLAPEL-LWLSPLTEGAPRTREETRDLVHAP 397
Query: 431 ALCTHRPSLL 460
T + S L
Sbjct: 398 LPLTWKRSSL 407
>AY358384-1|AAQ88750.1| 830|Homo sapiens EQYK340 protein.
Length = 830
Score = 33.9 bits (74), Expect = 0.42
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +2
Query: 251 LDVLGRTRATLKESACSPWPRGPGNPLKLLRAGDWGLQLSPIKRGIPSKRES*ARVDYVP 430
++ +G +R K S CS + PGN +L A + L LSP+ G P RE + + P
Sbjct: 701 VNAVGHSRGGEKRSLCSEGRQAPGNEDELHLAPEL-LWLSPLTEGAPRTREETRDLVHAP 759
Query: 431 ALCTHRPSLL 460
T + S L
Sbjct: 760 LPLTWKRSSL 769
>X05562-1|CAA29076.1| 1043|Homo sapiens protein ( Human mRNA for
alpha-2 chain of collagen IV N-terminus. ).
Length = 1043
Score = 30.7 bits (66), Expect = 4.0
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 390 GIPRFMGDNCKPQSPARRSFSGLPGPLGQG 301
G+P GD+ P F GLPGP G G
Sbjct: 566 GVPGMKGDDGSPGRDGLDGFPGLPGPPGDG 595
>AL161773-3|CAH71366.2| 1712|Homo sapiens collagen type IV alpha 2
protein.
Length = 1712
Score = 30.7 bits (66), Expect = 4.0
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 390 GIPRFMGDNCKPQSPARRSFSGLPGPLGQG 301
G+P GD+ P F GLPGP G G
Sbjct: 566 GVPGMKGDDGSPGRDGLDGFPGLPGPPGDG 595
>AL159153-1|CAH72050.2| 1712|Homo sapiens collagen type IV alpha 2
protein.
Length = 1712
Score = 30.7 bits (66), Expect = 4.0
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 390 GIPRFMGDNCKPQSPARRSFSGLPGPLGQG 301
G+P GD+ P F GLPGP G G
Sbjct: 566 GVPGMKGDDGSPGRDGLDGFPGLPGPPGDG 595
>AL139385-2|CAI17005.2| 1712|Homo sapiens collagen type IV alpha 2
protein.
Length = 1712
Score = 30.7 bits (66), Expect = 4.0
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 390 GIPRFMGDNCKPQSPARRSFSGLPGPLGQG 301
G+P GD+ P F GLPGP G G
Sbjct: 566 GVPGMKGDDGSPGRDGLDGFPGLPGPPGDG 595
>BC113946-1|AAI13947.1| 180|Homo sapiens interleukin 17B protein.
Length = 180
Score = 29.5 bits (63), Expect = 9.1
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = -3
Query: 396 LLGIPRFMGDNCKPQSP-ARRSFSGLPGPLGQGEHADSFS-VARVRP 262
LL I F+G +P+SP ++R G PGPL G H V+R++P
Sbjct: 10 LLTISIFLGLG-QPRSPKSKRKGQGRPGPLAPGPHQVPLDLVSRMKP 55
>BC113925-1|AAI13926.1| 180|Homo sapiens interleukin 17B protein.
Length = 180
Score = 29.5 bits (63), Expect = 9.1
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = -3
Query: 396 LLGIPRFMGDNCKPQSP-ARRSFSGLPGPLGQGEHADSFS-VARVRP 262
LL I F+G +P+SP ++R G PGPL G H V+R++P
Sbjct: 10 LLTISIFLGLG-QPRSPKSKRKGQGRPGPLAPGPHQVPLDLVSRMKP 55
>AY358931-1|AAQ89290.1| 180|Homo sapiens IL17 B protein.
Length = 180
Score = 29.5 bits (63), Expect = 9.1
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = -3
Query: 396 LLGIPRFMGDNCKPQSP-ARRSFSGLPGPLGQGEHADSFS-VARVRP 262
LL I F+G +P+SP ++R G PGPL G H V+R++P
Sbjct: 10 LLTISIFLGLG-QPRSPKSKRKGQGRPGPLAPGPHQVPLDLVSRMKP 55
>AF386077-1|AAK60336.1| 180|Homo sapiens interleukin 17B protein.
Length = 180
Score = 29.5 bits (63), Expect = 9.1
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = -3
Query: 396 LLGIPRFMGDNCKPQSP-ARRSFSGLPGPLGQGEHADSFS-VARVRP 262
LL I F+G +P+SP ++R G PGPL G H V+R++P
Sbjct: 10 LLTISIFLGLG-QPRSPKSKRKGQGRPGPLAPGPHQVPLDLVSRMKP 55
>AF218727-1|AAG44136.1| 180|Homo sapiens neuronal interleukin-17
related factor protein.
Length = 180
Score = 29.5 bits (63), Expect = 9.1
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = -3
Query: 396 LLGIPRFMGDNCKPQSP-ARRSFSGLPGPLGQGEHADSFS-VARVRP 262
LL I F+G +P+SP ++R G PGPL G H V+R++P
Sbjct: 10 LLTISIFLGLG-QPRSPKSKRKGQGRPGPLAPGPHQVPLDLVSRMKP 55
>AF212311-1|AAF78775.1| 180|Homo sapiens interleukin 20 protein.
Length = 180
Score = 29.5 bits (63), Expect = 9.1
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = -3
Query: 396 LLGIPRFMGDNCKPQSP-ARRSFSGLPGPLGQGEHADSFS-VARVRP 262
LL I F+G +P+SP ++R G PGPL G H V+R++P
Sbjct: 10 LLTISIFLGLG-QPRSPKSKRKGQGRPGPLAPGPHQVPLDLVSRMKP 55
>AF184969-1|AAF01318.1| 180|Homo sapiens cytokine-like protein
ZCYTO7 protein.
Length = 180
Score = 29.5 bits (63), Expect = 9.1
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = -3
Query: 396 LLGIPRFMGDNCKPQSP-ARRSFSGLPGPLGQGEHADSFS-VARVRP 262
LL I F+G +P+SP ++R G PGPL G H V+R++P
Sbjct: 10 LLTISIFLGLG-QPRSPKSKRKGQGRPGPLAPGPHQVPLDLVSRMKP 55
>AF152098-1|AAF28104.1| 180|Homo sapiens interleukin 17B protein.
Length = 180
Score = 29.5 bits (63), Expect = 9.1
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = -3
Query: 396 LLGIPRFMGDNCKPQSP-ARRSFSGLPGPLGQGEHADSFS-VARVRP 262
LL I F+G +P+SP ++R G PGPL G H V+R++P
Sbjct: 10 LLTISIFLGLG-QPRSPKSKRKGQGRPGPLAPGPHQVPLDLVSRMKP 55
>AF110385-1|AAG39637.1| 180|Homo sapiens interleukin-17 beta
protein.
Length = 180
Score = 29.5 bits (63), Expect = 9.1
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = -3
Query: 396 LLGIPRFMGDNCKPQSP-ARRSFSGLPGPLGQGEHADSFS-VARVRP 262
LL I F+G +P+SP ++R G PGPL G H V+R++P
Sbjct: 10 LLTISIFLGLG-QPRSPKSKRKGQGRPGPLAPGPHQVPLDLVSRMKP 55
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,636,686
Number of Sequences: 237096
Number of extensions: 2081883
Number of successful extensions: 5208
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5193
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6098631048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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