Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5781
(448 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M82829-1|AAA59972.1| 744|Homo sapiens fusion protein protein. 32 0.77
M79464-1|AAA60390.1| 802|Homo sapiens PML protein. 32 0.77
BT009911-1|AAP88913.1| 781|Homo sapiens promyelocytic leukemia ... 32 0.77
BC020994-1|AAH20994.1| 781|Homo sapiens promyelocytic leukemia ... 32 0.77
BC000080-1|AAH00080.2| 781|Homo sapiens promyelocytic leukemia ... 32 0.77
AF230410-1|AAG50189.1| 829|Homo sapiens tripartite motif protei... 32 0.77
AF230403-1|AAG50182.1| 824|Homo sapiens tripartite motif protei... 32 0.77
BC064348-1|AAH64348.1| 944|Homo sapiens chromosome 13 open read... 29 9.5
BC053566-1|AAH53566.1| 781|Homo sapiens C13orf23 protein protein. 29 9.5
AL834435-1|CAD39095.1| 294|Homo sapiens hypothetical protein pr... 29 9.5
AL445590-3|CAI40975.1| 944|Homo sapiens chromosome 13 open read... 29 9.5
AB107354-1|BAC67659.1| 952|Homo sapiens KIAA2032 protein protein. 29 9.5
>M82829-1|AAA59972.1| 744|Homo sapiens fusion protein protein.
Length = 744
Score = 32.3 bits (70), Expect = 0.77
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 230 ILDPVDRMVNSRRRPKHVIKG--PPRSINGAFRYLKRRSRSLVEPVACAQWLDEF 388
I P++ N++ P + +G PP I GA R RSRSL +QWL+ F
Sbjct: 613 ITGPLNHPANAQEHPAQLQRGISPPHRIRGAVR---SRSRSLRGSSHLSQWLNNF 664
>M79464-1|AAA60390.1| 802|Homo sapiens PML protein.
Length = 802
Score = 32.3 bits (70), Expect = 0.77
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 230 ILDPVDRMVNSRRRPKHVIKG--PPRSINGAFRYLKRRSRSLVEPVACAQWLDEF 388
I P++ N++ P + +G PP I GA R RSRSL +QWL+ F
Sbjct: 671 ITGPLNHPANAQEHPAQLQRGISPPHRIRGAVR---SRSRSLRGSSHLSQWLNNF 722
>BT009911-1|AAP88913.1| 781|Homo sapiens promyelocytic leukemia
protein.
Length = 781
Score = 32.3 bits (70), Expect = 0.77
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 230 ILDPVDRMVNSRRRPKHVIKG--PPRSINGAFRYLKRRSRSLVEPVACAQWLDEF 388
I P++ N++ P + +G PP I GA R RSRSL +QWL+ F
Sbjct: 650 ITGPLNHPANAQEHPAQLQRGISPPHRIRGAVR---SRSRSLRGSSHLSQWLNNF 701
>BC020994-1|AAH20994.1| 781|Homo sapiens promyelocytic leukemia
protein.
Length = 781
Score = 32.3 bits (70), Expect = 0.77
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 230 ILDPVDRMVNSRRRPKHVIKG--PPRSINGAFRYLKRRSRSLVEPVACAQWLDEF 388
I P++ N++ P + +G PP I GA R RSRSL +QWL+ F
Sbjct: 650 ITGPLNHPANAQEHPAQLQRGISPPHRIRGAVR---SRSRSLRGSSHLSQWLNNF 701
>BC000080-1|AAH00080.2| 781|Homo sapiens promyelocytic leukemia
protein.
Length = 781
Score = 32.3 bits (70), Expect = 0.77
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 230 ILDPVDRMVNSRRRPKHVIKG--PPRSINGAFRYLKRRSRSLVEPVACAQWLDEF 388
I P++ N++ P + +G PP I GA R RSRSL +QWL+ F
Sbjct: 650 ITGPLNHPANAQEHPAQLQRGISPPHRIRGAVR---SRSRSLRGSSHLSQWLNNF 701
>AF230410-1|AAG50189.1| 829|Homo sapiens tripartite motif protein
TRIM19 kappa protein.
Length = 829
Score = 32.3 bits (70), Expect = 0.77
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 230 ILDPVDRMVNSRRRPKHVIKG--PPRSINGAFRYLKRRSRSLVEPVACAQWLDEF 388
I P++ N++ P + +G PP I GA R RSRSL +QWL+ F
Sbjct: 698 ITGPLNHPANAQEHPAQLQRGISPPHRIRGAVR---SRSRSLRGSSHLSQWLNNF 749
>AF230403-1|AAG50182.1| 824|Homo sapiens tripartite motif protein
TRIM19 gamma protein.
Length = 824
Score = 32.3 bits (70), Expect = 0.77
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 230 ILDPVDRMVNSRRRPKHVIKG--PPRSINGAFRYLKRRSRSLVEPVACAQWLDEF 388
I P++ N++ P + +G PP I GA R RSRSL +QWL+ F
Sbjct: 693 ITGPLNHPANAQEHPAQLQRGISPPHRIRGAVR---SRSRSLRGSSHLSQWLNNF 744
>BC064348-1|AAH64348.1| 944|Homo sapiens chromosome 13 open reading
frame 23 protein.
Length = 944
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 318 LGTSSGGHGPLSNPSLAPNGSTSLLTP*HTA 410
L T G PLS+ SL P+GS++ + P TA
Sbjct: 666 LSTPLNGSNPLSSISLPPHGSSTPIAPVFTA 696
>BC053566-1|AAH53566.1| 781|Homo sapiens C13orf23 protein protein.
Length = 781
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 318 LGTSSGGHGPLSNPSLAPNGSTSLLTP*HTA 410
L T G PLS+ SL P+GS++ + P TA
Sbjct: 503 LSTPLNGSNPLSSISLPPHGSSTPIAPVFTA 533
>AL834435-1|CAD39095.1| 294|Homo sapiens hypothetical protein
protein.
Length = 294
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 318 LGTSSGGHGPLSNPSLAPNGSTSLLTP*HTA 410
L T G PLS+ SL P+GS++ + P TA
Sbjct: 16 LSTPLNGSNPLSSISLPPHGSSTPIAPVFTA 46
>AL445590-3|CAI40975.1| 944|Homo sapiens chromosome 13 open reading
frame 23 protein.
Length = 944
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 318 LGTSSGGHGPLSNPSLAPNGSTSLLTP*HTA 410
L T G PLS+ SL P+GS++ + P TA
Sbjct: 666 LSTPLNGSNPLSSISLPPHGSSTPIAPVFTA 696
>AB107354-1|BAC67659.1| 952|Homo sapiens KIAA2032 protein protein.
Length = 952
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 318 LGTSSGGHGPLSNPSLAPNGSTSLLTP*HTA 410
L T G PLS+ SL P+GS++ + P TA
Sbjct: 674 LSTPLNGSNPLSSISLPPHGSSTPIAPVFTA 704
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,822,404
Number of Sequences: 237096
Number of extensions: 1814002
Number of successful extensions: 3410
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3410
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3644351872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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