Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5781
(448 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 26 0.22
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 24 0.87
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 24 0.87
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 24 0.87
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 24 0.87
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 24 0.87
U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein. 23 1.2
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 23 1.5
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 2.0
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 22 3.5
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 21 4.6
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 25.8 bits (54), Expect = 0.22
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 179 TRWSVSSSNHLSKKKGVILDPVDRMVNSRRRPKHVIKGPPRSINGAFRYL 328
TR S N K V +P D+ NS+ R + +++ R I A Y+
Sbjct: 1145 TRPDTDSENWTPKMMAV--EPTDKQANSKTRRQEMMREAGRGIESAKSYV 1192
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 0.87
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -2
Query: 396 GLINSSSHWAQATGSTRDRDRRLR 325
G ++SSH+++ +RDR+R R
Sbjct: 223 GFQHTSSHYSRERSCSRDRNREYR 246
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 0.87
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -2
Query: 396 GLINSSSHWAQATGSTRDRDRRLR 325
G ++SSH+++ +RDR+R R
Sbjct: 223 GFQHTSSHYSRERSCSRDRNREYR 246
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 0.87
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -2
Query: 396 GLINSSSHWAQATGSTRDRDRRLR 325
G ++SSH+++ +RDR+R R
Sbjct: 223 GFQHTSSHYSRERSCSRDRNREYR 246
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 0.87
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -2
Query: 396 GLINSSSHWAQATGSTRDRDRRLR 325
G ++SSH+++ +RDR+R R
Sbjct: 223 GFQHTSSHYSRERSCSRDRNREYR 246
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.8 bits (49), Expect = 0.87
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -2
Query: 396 GLINSSSHWAQATGSTRDRDRRLR 325
G ++SSH+++ +RDR+R R
Sbjct: 212 GFQHTSSHYSRERSCSRDRNREYR 235
>U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein.
Length = 182
Score = 23.4 bits (48), Expect = 1.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 435 EDPAKKLSGLCAMGLINSSSHWAQATGST 349
E P +L LC++ S S W TGST
Sbjct: 73 EQPTLRL--LCSIAGGTSESQWEDVTGST 99
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 23.0 bits (47), Expect = 1.5
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 254 VNSRRRPKHVIKGPPRSINGAFRYLKRRSRSLVEPVA 364
V S+ RP+ +GPP + F +L S + VA
Sbjct: 208 VGSKLRPRSSFQGPPFTYRYGFSFLLYVSGFITTEVA 244
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.6 bits (46), Expect = 2.0
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = -2
Query: 396 GLINSSSHWAQATGSTRDRDRRLR 325
G ++SSH+++ +RDR+R +
Sbjct: 223 GFQHTSSHYSRERSCSRDRNREYK 246
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.8 bits (44), Expect = 3.5
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 197 SSNHLSKKKGVILDPVDRMVNSRRRPKHVIKGPPRSINGAFR 322
S NH K G+ PV V R+P + I G ++N A R
Sbjct: 888 SFNHFVLKMGINHGPVTAGVIGARKPHYDIWG--NTVNVASR 927
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.4 bits (43), Expect = 4.6
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 190 RPPGVKWLLEPINIY 146
RPPG + PIN+Y
Sbjct: 28 RPPGEINSINPINVY 42
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,431
Number of Sequences: 438
Number of extensions: 3206
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11697255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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