Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5779
(671 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81460-5|CAB03832.1| 952|Caenorhabditis elegans Hypothetical pr... 31 0.99
Z70209-3|CAA94147.1| 952|Caenorhabditis elegans Hypothetical pr... 31 0.99
Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z81120-3|CAB03345.2| 135|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 27 9.2
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 27 9.2
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 27 9.2
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 27 9.2
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 27 9.2
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 27 9.2
>Z81460-5|CAB03832.1| 952|Caenorhabditis elegans Hypothetical
protein C04A11.4 protein.
Length = 952
Score = 30.7 bits (66), Expect = 0.99
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +1
Query: 214 ICQLDEYCSPETNRC 258
IC LDEYC+ ETN C
Sbjct: 444 ICDLDEYCNGETNDC 458
>Z70209-3|CAA94147.1| 952|Caenorhabditis elegans Hypothetical
protein C04A11.4 protein.
Length = 952
Score = 30.7 bits (66), Expect = 0.99
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +1
Query: 214 ICQLDEYCSPETNRC 258
IC LDEYC+ ETN C
Sbjct: 444 ICDLDEYCNGETNDC 458
>Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 190 DGIRCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNYDSGLCVKEC 327
D C ++ C+ +E+ TN C P VVC+ +D G K+C
Sbjct: 320 DEEHCSEVQCKSNEFRCESTNVCVPTVVVCDGWKDCHD-GSDEKKC 364
>Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 190 DGIRCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNYDSGLCVKEC 327
D C ++ C+ +E+ TN C P VVC+ +D G K+C
Sbjct: 320 DEEHCSEVQCKSNEFRCESTNVCVPTVVVCDGWKDCHD-GSDEKKC 364
>Z81120-3|CAB03345.2| 135|Caenorhabditis elegans Hypothetical
protein T12D8.5 protein.
Length = 135
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +1
Query: 508 KQKFQPAKNRVKQYPNDLTHHNPHAEAPKPKPELKLE 618
K++ + K + + L HN H +AP+ PE +E
Sbjct: 59 KERVELLKQEIDRAEQLLAEHNKHVDAPEIAPETYME 95
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 199 RCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNY 300
R G++ L C +NRC+P N +C T Y
Sbjct: 1066 RPGRVCVALQNECLDGSNRCSP-NALCTDTEEGY 1098
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 199 RCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNY 300
R G++ L C +NRC+P N +C T Y
Sbjct: 1650 RPGRVCVALQNECLDGSNRCSP-NALCTDTEEGY 1682
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 199 RCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNY 300
R G++ L C +NRC+P N +C T Y
Sbjct: 1066 RPGRVCVALQNECLDGSNRCSP-NALCTDTEEGY 1098
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 199 RCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNY 300
R G++ L C +NRC+P N +C T Y
Sbjct: 1650 RPGRVCVALQNECLDGSNRCSP-NALCTDTEEGY 1682
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 199 RCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNY 300
R G++ L C +NRC+P N +C T Y
Sbjct: 1650 RPGRVCVALQNECLDGSNRCSP-NALCTDTEEGY 1682
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 529 KNRVKQYPNDLTHHNPHAEAP-KPKPELKLEIRNPGIP 639
K +V + N L + +P + AP KP P L + I PG+P
Sbjct: 230 KAQVSKAQNSLNNSSPTSTAPKKPVPSL-MSINIPGVP 266
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 529 KNRVKQYPNDLTHHNPHAEAP-KPKPELKLEIRNPGIP 639
K +V + N L + +P + AP KP P L + I PG+P
Sbjct: 253 KAQVSKAQNSLNNSSPTSTAPKKPVPSL-MSINIPGVP 289
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 529 KNRVKQYPNDLTHHNPHAEAP-KPKPELKLEIRNPGIP 639
K +V + N L + +P + AP KP P L + I PG+P
Sbjct: 503 KAQVSKAQNSLNNSSPTSTAPKKPVPSL-MSINIPGVP 539
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,708,944
Number of Sequences: 27780
Number of extensions: 328750
Number of successful extensions: 1012
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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