Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5776
(688 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U18384-1|AAA62504.1| 293|Caenorhabditis elegans collagen protein. 54 1e-07
U80451-7|AAB37841.3| 277|Caenorhabditis elegans Collagen protei... 53 2e-07
Z81076-3|CAB03052.1| 394|Caenorhabditis elegans Hypothetical pr... 45 4e-05
U18385-1|AAA62505.1| 276|Caenorhabditis elegans collagen protein. 44 1e-04
AC006743-4|AAF60502.1| 291|Caenorhabditis elegans Collagen prot... 33 0.25
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 32 0.33
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 32 0.33
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 32 0.33
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 29 0.48
Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical pr... 31 0.58
AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen prot... 31 0.58
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 31 0.77
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 31 0.77
Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical pr... 31 1.0
X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein. 31 1.0
X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein. 31 1.0
Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z34801-3|CAA84327.1| 520|Caenorhabditis elegans Hypothetical pr... 29 2.4
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 29 2.4
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 29 2.4
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 29 3.1
AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen prot... 29 3.1
Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 29 4.1
AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical... 29 4.1
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 28 5.4
U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protei... 28 5.4
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 28 5.4
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 28 5.4
AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen pro... 28 5.4
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 28 5.4
Z93239-2|CAB07529.2| 1218|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z69660-2|CAD57697.1| 1218|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical pr... 28 7.2
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 28 7.2
U55364-5|AAQ23124.1| 368|Caenorhabditis elegans Prion-like-(q/n... 28 7.2
U55364-4|AAA97972.1| 382|Caenorhabditis elegans Prion-like-(q/n... 28 7.2
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 24 8.4
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 24 8.5
Z19152-2|CAA79544.1| 1150|Caenorhabditis elegans Hypothetical pr... 27 9.5
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 27 9.5
CU457737-9|CAM36330.1| 281|Caenorhabditis elegans Hypothetical ... 27 9.5
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 27 9.5
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 27 9.5
>U18384-1|AAA62504.1| 293|Caenorhabditis elegans collagen protein.
Length = 293
Score = 53.6 bits (123), Expect = 1e-07
Identities = 34/116 (29%), Positives = 62/116 (53%), Gaps = 3/116 (2%)
Frame = +2
Query: 302 PEHQDNQGSPEHQDNQVNQATQDKVDSL*SLVSQDTQVSQASRDTLDNQDSQEHQANRV- 478
PE + Q +HQD+Q +Q ++D++D+ QD + Q +D + QD+QE Q
Sbjct: 94 PETPETQDQRDHQDSQEHQESKDQMDAQEPQEPQDHKDHQEPQDKTELQDNQEPQDKSAP 153
Query: 479 SQDNQGSPEHQDKQVNQATQDKVDNL*SLLSRD--TQASLDNQGQARNTRTTQGQP 640
SQ +QG+ + Q+ Q + QD+ D +L +D Q + ++ + + T+ Q +P
Sbjct: 154 SQPHQGTQDSQESQEPKDHQDQTDTQEALDHKDHQDQQEMLDKTELQETQEPQERP 209
Score = 53.2 bits (122), Expect = 2e-07
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Frame = +2
Query: 296 ASPEHQDNQGSPEHQDNQVNQATQDKVDSL*SLVSQDTQVSQASRDTLDNQDSQEHQANR 475
AS HQD +PE QD + +Q +Q+ +S + +Q+ Q Q +D + QD E Q N+
Sbjct: 86 ASSAHQDQPETPETQDQRDHQDSQEHQESKDQMDAQEPQEPQDHKDHQEPQDKTELQDNQ 145
Query: 476 VSQDNQG-SPEHQDKQVNQATQDKVDNL*SLLSRDTQASLDNQ 601
QD S HQ Q +Q +Q+ D+ DTQ +LD++
Sbjct: 146 EPQDKSAPSQPHQGTQDSQESQEPKDH---QDQTDTQEALDHK 185
Score = 46.0 bits (104), Expect = 3e-05
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +2
Query: 299 SPEHQDNQGSPEHQDNQVNQATQDKVDSL*SLVSQDTQV-SQASRDTLDNQDSQEHQANR 475
S + D Q E QD++ +Q QDK + + QD SQ + T D+Q+SQE + ++
Sbjct: 114 SKDQMDAQEPQEPQDHKDHQEPQDKTELQDNQEPQDKSAPSQPHQGTQDSQESQEPKDHQ 173
Query: 476 VSQDNQGSPEHQDKQVNQATQDKVD 550
D Q + +H+D Q Q DK +
Sbjct: 174 DQTDTQEALDHKDHQDQQEMLDKTE 198
Score = 34.7 bits (76), Expect = 0.063
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +2
Query: 299 SPEHQDNQGSPEHQDNQVNQATQDKVDSL*SLVSQDTQVSQASRDTLDNQDSQEHQANRV 478
S Q +QG+ + Q++Q + QD+ D+ +L +D Q Q D + Q++QE Q
Sbjct: 151 SAPSQPHQGTQDSQESQEPKDHQDQTDTQEALDHKDHQDQQEMLDKTELQETQEPQERPE 210
Query: 479 SQD 487
SQ+
Sbjct: 211 SQE 213
Score = 34.3 bits (75), Expect = 0.083
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +2
Query: 305 EHQDNQGSPEHQ-DNQVNQATQDKVDSL*SLVSQDTQVSQASRDTLDNQDSQEHQANRVS 481
E QDNQ + +Q +Q TQD +S QD +Q + D D+QD QE
Sbjct: 140 ELQDNQEPQDKSAPSQPHQGTQDSQESQEPKDHQDQTDTQEALDHKDHQDQQEMLDKTEL 199
Query: 482 QDNQGSPEHQDKQVNQATQD 541
Q+ Q E + Q +D
Sbjct: 200 QETQEPQERPESQERTDPRD 219
Score = 32.7 bits (71), Expect = 0.25
Identities = 29/113 (25%), Positives = 48/113 (42%)
Frame = +2
Query: 305 EHQDNQGSPEHQDNQVNQATQDKVDSL*SLVSQDTQVSQASRDTLDNQDSQEHQANRVSQ 484
E QD E ++Q Q QD++ + + +Q +S +S D ++ E Q R Q
Sbjct: 49 ETQDKTEPQEMTEDQEPQELQDQMLQM-IMFNQPPPISASSAHQ-DQPETPETQDQRDHQ 106
Query: 485 DNQGSPEHQDKQVNQATQDKVDNL*SLLSRDTQASLDNQGQARNTRTTQGQPG 643
D+Q E +D+ Q Q+ D+ +D DNQ + +Q G
Sbjct: 107 DSQEHQESKDQMDAQEPQEPQDHKDHQEPQDKTELQDNQEPQDKSAPSQPHQG 159
>U80451-7|AAB37841.3| 277|Caenorhabditis elegans Collagen protein
17 protein.
Length = 277
Score = 53.2 bits (122), Expect = 2e-07
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Frame = +2
Query: 296 ASPEHQDNQGSPEHQDNQVNQATQDKVDSL*SLVSQDTQVSQASRDTLDNQDSQEHQANR 475
AS HQD +PE QD + +Q +Q+ +S + +Q+ Q Q +D + QD E Q N+
Sbjct: 86 ASSAHQDQPETPETQDQRDHQDSQEHQESKDQMDAQEPQEPQDHKDHQEPQDKTELQDNQ 145
Query: 476 VSQDNQG-SPEHQDKQVNQATQDKVDNL*SLLSRDTQASLDNQ 601
QD S HQ Q +Q +Q+ D+ DTQ +LD++
Sbjct: 146 EPQDKSAPSQPHQGTQDSQESQEPKDH---QDQTDTQEALDHK 185
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/116 (29%), Positives = 62/116 (53%), Gaps = 3/116 (2%)
Frame = +2
Query: 302 PEHQDNQGSPEHQDNQVNQATQDKVDSL*SLVSQDTQVSQASRDTLDNQDSQEHQANRV- 478
PE + Q +HQD+Q +Q ++D++D+ QD + Q +D + QD+QE Q
Sbjct: 94 PETPETQDQRDHQDSQEHQESKDQMDAQEPQEPQDHKDHQEPQDKTELQDNQEPQDKSAP 153
Query: 479 SQDNQGSPEHQDKQVNQATQDKVDNL*SLLSRDTQ--ASLDNQGQARNTRTTQGQP 640
SQ +QG+ + Q+ Q + QD+ D +L +D Q + ++ + + T+ Q +P
Sbjct: 154 SQPHQGTQDSQESQEPKDHQDQTDTQEALDHKDHQDHKEMLDKTELQETQEPQERP 209
Score = 44.8 bits (101), Expect = 6e-05
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +2
Query: 299 SPEHQDNQGSPEHQDNQVNQATQDKVDSL*SLVSQDTQV-SQASRDTLDNQDSQEHQANR 475
S + D Q E QD++ +Q QDK + + QD SQ + T D+Q+SQE + ++
Sbjct: 114 SKDQMDAQEPQEPQDHKDHQEPQDKTELQDNQEPQDKSAPSQPHQGTQDSQESQEPKDHQ 173
Query: 476 VSQDNQGSPEHQDKQVNQATQDKVD 550
D Q + +H+D Q ++ DK +
Sbjct: 174 DQTDTQEALDHKDHQDHKEMLDKTE 198
Score = 33.5 bits (73), Expect = 0.14
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +2
Query: 305 EHQDNQGSPEHQ-DNQVNQATQDKVDSL*SLVSQDTQVSQASRDTLDNQDSQEHQANRVS 481
E QDNQ + +Q +Q TQD S SQ+ + Q DT + D ++HQ ++
Sbjct: 140 ELQDNQEPQDKSAPSQPHQGTQD------SQESQEPKDHQDQTDTQEALDHKDHQDHKEM 193
Query: 482 QDNQGSPEHQDKQVNQATQDKVD 550
D E Q+ Q +Q++ D
Sbjct: 194 LDKTELQETQEPQERPESQERTD 216
Score = 32.7 bits (71), Expect = 0.25
Identities = 29/113 (25%), Positives = 48/113 (42%)
Frame = +2
Query: 305 EHQDNQGSPEHQDNQVNQATQDKVDSL*SLVSQDTQVSQASRDTLDNQDSQEHQANRVSQ 484
E QD E ++Q Q QD++ + + +Q +S +S D ++ E Q R Q
Sbjct: 49 ETQDKTEPQEMTEDQEPQELQDQMLQM-IMFNQPPPISASSAHQ-DQPETPETQDQRDHQ 106
Query: 485 DNQGSPEHQDKQVNQATQDKVDNL*SLLSRDTQASLDNQGQARNTRTTQGQPG 643
D+Q E +D+ Q Q+ D+ +D DNQ + +Q G
Sbjct: 107 DSQEHQESKDQMDAQEPQEPQDHKDHQEPQDKTELQDNQEPQDKSAPSQPHQG 159
Score = 32.7 bits (71), Expect = 0.25
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +2
Query: 299 SPEHQDNQGSPEHQDNQVNQATQDKVDSL*SLVSQDTQVSQASRDTLDNQDSQEHQANRV 478
S Q +QG+ + Q++Q + QD+ D+ +L +D Q + D + Q++QE Q
Sbjct: 151 SAPSQPHQGTQDSQESQEPKDHQDQTDTQEALDHKDHQDHKEMLDKTELQETQEPQERPE 210
Query: 479 SQD 487
SQ+
Sbjct: 211 SQE 213
>Z81076-3|CAB03052.1| 394|Caenorhabditis elegans Hypothetical
protein F35C5.3 protein.
Length = 394
Score = 45.2 bits (102), Expect = 4e-05
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Frame = +2
Query: 299 SPEHQDNQGSPEHQDNQVNQAT---QDKVDSL*SLVSQDTQVSQASRDTLDNQDSQEHQA 469
S E +QG+ Q+N V+Q T QD S + VSQDT VSQ DT +Q+S Q
Sbjct: 113 SQETTVSQGTTVSQENTVSQETTVSQDTTVSQETTVSQDTTVSQ---DTTVSQESTVSQE 169
Query: 470 NRVSQDNQGSPEHQDKQVNQATQDKVDNL*SLLSRDTQAS 589
VSQD S E + D + S +S+DT S
Sbjct: 170 TTVSQDTTVSQETSVSHETNVSPDTTVSQESTVSQDTTVS 209
Score = 42.3 bits (95), Expect = 3e-04
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Frame = +2
Query: 311 QDNQGSPEHQDNQVNQATQDKVDSL*SLVSQDTQVSQ---ASRDTLDNQDSQEHQANRVS 481
Q+N S E +Q +Q+ S + VSQDT VSQ S++T +QD+ Q VS
Sbjct: 126 QENTVSQETTVSQDTTVSQETTVSQDTTVSQDTTVSQESTVSQETTVSQDTTVSQETSVS 185
Query: 482 QDNQGSPEHQDKQVNQATQDKVDNL*SLLSRDTQAS 589
+ SP+ Q + +QD + + LS++T S
Sbjct: 186 HETNVSPDTTVSQESTVSQDTTVSQETTLSQETTVS 221
Score = 39.5 bits (88), Expect = 0.002
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +2
Query: 299 SPEHQDNQGSPEHQDNQVNQAT---QDKVDSL*SLVSQDTQVSQASRDTLDNQDSQEHQA 469
SP+ +Q S QD V+Q T Q+ S + VSQDT VSQ +T +QD+ Q
Sbjct: 191 SPDTTVSQESTVSQDTTVSQETTLSQETTVSQETTVSQDTTVSQ---ETTASQDTTVSQD 247
Query: 470 NRVSQDNQGSPEHQDKQVNQATQDKVDN 553
VSQD P+ + +A++ +N
Sbjct: 248 TTVSQDTTVVPQETTVEATKASEATEEN 275
Score = 39.1 bits (87), Expect = 0.003
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 9/113 (7%)
Frame = +2
Query: 326 SPEHQDNQVNQAT---QDKVDSL*SLVSQDTQVSQ---ASRDTLDNQDSQEHQANRVSQD 487
S E Q+ V+Q T Q+ S + VSQDT VSQ S+DT +QD+ Q + VSQ+
Sbjct: 110 SGESQETTVSQGTTVSQENTVSQETTVSQDTTVSQETTVSQDTTVSQDTTVSQESTVSQE 169
Query: 488 ---NQGSPEHQDKQVNQATQDKVDNL*SLLSRDTQASLDNQGQARNTRTTQGQ 637
+Q + Q+ V+ T D S S +Q + +Q + TT Q
Sbjct: 170 TTVSQDTTVSQETSVSHETNVSPDTTVSQESTVSQDTTVSQETTLSQETTVSQ 222
Score = 39.1 bits (87), Expect = 0.003
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Frame = +2
Query: 317 NQGSPEHQDNQVNQAT---QDKVDSL*SLVSQDTQVSQ---ASRDTLDNQDSQEHQANRV 478
+Q + QD V+Q T Q+ S + VSQDT VSQ S +T + D+ Q + V
Sbjct: 143 SQETTVSQDTTVSQDTTVSQESTVSQETTVSQDTTVSQETSVSHETNVSPDTTVSQESTV 202
Query: 479 SQDNQGSPEHQDKQVNQATQDKVDNL*SLLSRDTQASLDNQGQARNTRTTQGQPGLPR 652
SQD S E Q +Q+ + + +S++T AS D +++T +Q +P+
Sbjct: 203 SQDTTVSQETTLSQETTVSQETTVSQDTTVSQETTASQDTT-VSQDTTVSQDTTVVPQ 259
Score = 37.5 bits (83), Expect = 0.009
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Frame = +2
Query: 311 QDNQGSPEHQDNQVNQATQDKVDSL*SLVSQDTQVSQ---ASRDTLDNQDSQEHQANRVS 481
QD S + +Q + +Q+ S + VSQ+T VS S DT +Q+S Q VS
Sbjct: 150 QDTTVSQDTTVSQESTVSQETTVSQDTTVSQETSVSHETNVSPDTTVSQESTVSQDTTVS 209
Query: 482 QDNQGSPEHQDKQVNQATQDKVDNL*SLLSRDTQASLD 595
Q+ S E Q +QD + + S+DT S D
Sbjct: 210 QETTLSQETTVSQETTVSQDTTVSQETTASQDTTVSQD 247
Score = 35.9 bits (79), Expect = 0.027
Identities = 38/136 (27%), Positives = 54/136 (39%)
Frame = +2
Query: 188 VDNNRAVSPLILVNLDTPAIXXXXXXXXXXXXXXXXASPEHQDNQGSPEHQDNQVNQATQ 367
V VS V+ DT S E +Q + QD V+Q T
Sbjct: 124 VSQENTVSQETTVSQDTTVSQETTVSQDTTVSQDTTVSQESTVSQETTVSQDTTVSQETS 183
Query: 368 DKVDSL*SLVSQDTQVSQASRDTLDNQDSQEHQANRVSQDNQGSPEHQDKQVNQATQDKV 547
+ + VS DT VSQ S + D SQE ++ + +Q + QD V+Q T
Sbjct: 184 VSHE---TNVSPDTTVSQESTVSQDTTVSQETTLSQETTVSQETTVSQDTTVSQETTASQ 240
Query: 548 DNL*SLLSRDTQASLD 595
D + +S+DT S D
Sbjct: 241 D---TTVSQDTTVSQD 253
Score = 35.1 bits (77), Expect = 0.047
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Frame = +2
Query: 317 NQGSPEHQDNQVNQATQDKVDSL*SLVSQDTQVSQ---ASRDTLDNQDSQEHQANRVSQD 487
++G+ H+ T +S + VSQ T VSQ S++T +QD+ Q VSQD
Sbjct: 92 SEGAETHETTVGQDTTVRSGESQETTVSQGTTVSQENTVSQETTVSQDTTVSQETTVSQD 151
Query: 488 NQGSPEHQDKQVNQATQDKVDNL*SLLSRDTQAS 589
S + Q + +Q+ + + +S++T S
Sbjct: 152 TTVSQDTTVSQESTVSQETTVSQDTTVSQETSVS 185
>U18385-1|AAA62505.1| 276|Caenorhabditis elegans collagen protein.
Length = 276
Score = 43.6 bits (98), Expect = 1e-04
Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 12/115 (10%)
Frame = +2
Query: 296 ASPEHQDNQGSPEHQDNQ--VNQATQ----DKVDSL*SLVSQDTQVSQASRDTLDNQDSQ 457
AS HQD Q +HQD Q ++Q + D D L S+D + Q ++ D QD Q
Sbjct: 75 ASSAHQDVQDQKDHQDFQDLLDQPEETEDADHQDQLEDQESKDHREMQEDQEPPDVQDQQ 134
Query: 458 EHQANR---VSQDNQGSPEHQD---KQVNQATQDKVDNL*SLLSRDTQASLDNQG 604
+H N+ SQD+Q +H+D K Q+ + + L +T D+QG
Sbjct: 135 DHVENQEPSTSQDSQDVQDHKDHAEKPDQPEIQEHQETMERLERTETPEDQDHQG 189
Score = 35.1 bits (77), Expect = 0.047
Identities = 22/82 (26%), Positives = 37/82 (45%)
Frame = +2
Query: 302 PEHQDNQGSPEHQDNQVNQATQDKVDSL*SLVSQDTQVSQASRDTLDNQDSQEHQANRVS 481
P+ QD Q E+Q+ +Q +QD D D Q ++T++ + E ++
Sbjct: 128 PDVQDQQDHVENQEPSTSQDSQDVQDHKDHAEKPDQPEIQEHQETMERLERTETPEDQDH 187
Query: 482 QDNQGSPEHQDKQVNQATQDKV 547
Q Q E QDK+ QD++
Sbjct: 188 QGIQERMEFQDKRERMPHQDQM 209
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/74 (27%), Positives = 34/74 (45%)
Frame = +2
Query: 305 EHQDNQGSPEHQDNQVNQATQDKVDSL*SLVSQDTQVSQASRDTLDNQDSQEHQANRVSQ 484
E+Q+ S + QD Q ++ +K D Q+T +T ++QD Q Q Q
Sbjct: 138 ENQEPSTSQDSQDVQDHKDHAEKPDQPEIQEHQETMERLERTETPEDQDHQGIQERMEFQ 197
Query: 485 DNQGSPEHQDKQVN 526
D + HQD+ ++
Sbjct: 198 DKRERMPHQDQMLD 211
>AC006743-4|AAF60502.1| 291|Caenorhabditis elegans Collagen protein
109 protein.
Length = 291
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = +3
Query: 603 GRPGTPGQPRV---NQDYPGTTWTPQAPPG 683
GRPGTPG+P + QD P P PPG
Sbjct: 117 GRPGTPGRPPIVCEEQDVPPCNPCPPGPPG 146
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 32.3 bits (70), Expect = 0.33
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = +3
Query: 564 CSAGTPRPAWTTRGRPGTPGQPRVNQDYPGTTWTPQAPPGQ 686
C G P PA T G+PG PG+P PG P PP Q
Sbjct: 100 CLPGPPGPAGTP-GKPGRPGKPGA----PGLPGNPGRPPQQ 135
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 32.3 bits (70), Expect = 0.33
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = +3
Query: 564 CSAGTPRPAWTTRGRPGTPGQPRVNQDYPGTTWTPQAPPGQ 686
C G P PA T G+PG PG+P PG P PP Q
Sbjct: 100 CLPGPPGPAGTP-GKPGRPGKPGA----PGLPGNPGRPPQQ 135
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 32.3 bits (70), Expect = 0.33
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = +3
Query: 564 CSAGTPRPAWTTRGRPGTPGQPRVNQDYPGTTWTPQAPPGQ 686
C G P PA T G+PG PG+P PG P PP Q
Sbjct: 100 CLPGPPGPAGTP-GKPGRPGKPGA----PGLPGNPGRPPQQ 135
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 28.7 bits (61), Expect(2) = 0.48
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
Frame = +3
Query: 603 GRPGTPGQP--RVNQDYPGTTWTPQAP--PGQ 686
G+PG PGQP R + PG P AP PGQ
Sbjct: 249 GQPGGPGQPGQRGSDGQPGNDGQPGAPGQPGQ 280
Score = 21.8 bits (44), Expect(2) = 0.48
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 570 AGTPRPAWTTRGRPGTPGQP 629
AG P + + G+PG GQP
Sbjct: 214 AGQPGSSSSEPGQPGPNGQP 233
>Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical
protein M18.1 protein.
Length = 337
Score = 31.5 bits (68), Expect = 0.58
Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = +3
Query: 603 GRPGTPGQPRVNQ-DYPGTTWT--PQAPPGQ 686
GRPG PG P PGT + PQ PPGQ
Sbjct: 195 GRPGAPGAPGTRSVGRPGTAGSPGPQGPPGQ 225
>AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen protein
105 protein.
Length = 290
Score = 31.5 bits (68), Expect = 0.58
Identities = 18/41 (43%), Positives = 19/41 (46%)
Frame = +3
Query: 564 CSAGTPRPAWTTRGRPGTPGQPRVNQDYPGTTWTPQAPPGQ 686
C G P P GRPG PG+P V PG P PP Q
Sbjct: 91 CIQGAPGPTGEP-GRPGRPGKPGV----PGMPGNPGKPPQQ 126
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 31.1 bits (67), Expect = 0.77
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 5/44 (11%)
Frame = +3
Query: 564 CSAGTPRPAWTTR-----GRPGTPGQPRVNQDYPGTTWTPQAPP 680
C G P PA GRPG PGQP V P P PP
Sbjct: 104 CLPGPPGPAGVPGKPGKPGRPGAPGQPGVPGKPPTAPCEPTTPP 147
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 31.1 bits (67), Expect = 0.77
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 5/44 (11%)
Frame = +3
Query: 564 CSAGTPRPAWTTR-----GRPGTPGQPRVNQDYPGTTWTPQAPP 680
C G P PA GRPG PGQP V P P PP
Sbjct: 104 CLPGPPGPAGVPGKPGKPGRPGAPGQPGVPGKPPTAPCEPTTPP 147
>Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.2 protein.
Length = 316
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +3
Query: 570 AGTPRPAWT--TRGRPGTPGQPRVNQDYPGTTWTPQAPPG 683
AG P PA + G G PG P D PGT P PPG
Sbjct: 211 AGPPGPAGQPGSNGNAGAPGAPGQVVDVPGTP-GPAGPPG 249
>Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.1 protein.
Length = 316
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +3
Query: 570 AGTPRPAWT--TRGRPGTPGQPRVNQDYPGTTWTPQAPPG 683
AG P PA + G G PG P D PGT P PPG
Sbjct: 211 AGPPGPAGQPGSNGNAGAPGAPGQVVDVPGTP-GPAGPPG 249
>X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +3
Query: 570 AGTPRPAWT--TRGRPGTPGQPRVNQDYPGTTWTPQAPPG 683
AG P PA + G G PG P D PGT P PPG
Sbjct: 211 AGPPGPAGQPGSNGNAGAPGAPGQVVDVPGTP-GPAGPPG 249
>X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +3
Query: 570 AGTPRPAWT--TRGRPGTPGQPRVNQDYPGTTWTPQAPPG 683
AG P PA + G G PG P D PGT P PPG
Sbjct: 211 AGPPGPAGQPGSNGNAGAPGAPGQVVDVPGTP-GPAGPPG 249
>Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical
protein F54D1.3 protein.
Length = 310
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = +3
Query: 561 ACSAGTPRPAWTTRGRPGTPGQPRVNQDYPGTTWTP 668
A S+G PA + G+PGTPGQ R N +PG P
Sbjct: 171 AGSSGPAGPAGPS-GQPGTPGQ-RGNDGFPGAPGAP 204
>Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical
protein F54D1.2 protein.
Length = 294
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = +3
Query: 561 ACSAGTPRPAWTTRGRPGTPGQPRVNQDYPGTTWTP 668
A S+G PA + G+PGTPGQ R N +PG P
Sbjct: 155 AGSSGPAGPAGPS-GQPGTPGQ-RGNDGFPGAPGAP 188
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +3
Query: 564 CSAGTPRPAWTTRGRPGTPGQPRVNQDYPGTTWTPQAPPGQ 686
C P+ T G+PG PG+P PG TP PP Q
Sbjct: 89 CCLPGPQGPQGTPGKPGKPGKPGA----PGQPGTPGRPPQQ 125
Score = 27.5 bits (58), Expect = 9.5
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 5/46 (10%)
Frame = +3
Query: 564 CSAGTPRPAWTT-RGRPGTPGQPRVNQDY--PGTTWT--PQAPPGQ 686
C TP P +G PG PGQP + D PG P A PG+
Sbjct: 127 CEPTTPPPCQPCPQGPPGPPGQPGIPGDNGPPGEQGPKGPDAAPGE 172
>Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical
protein F57B1.4 protein.
Length = 317
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +3
Query: 570 AGTPRPAWT--TRGRPGTPGQPRVNQDYPGTTWTPQAPPG 683
AG P P+ + G G PG P D PGT P PPG
Sbjct: 212 AGPPGPSGQPGSNGNAGAPGAPGQVVDVPGTP-GPAGPPG 250
>Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical
protein F57B1.3 protein.
Length = 313
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +3
Query: 570 AGTPRPAWT--TRGRPGTPGQPRVNQDYPGTTWTPQAPPG 683
AG P P+ + G G PG P D PGT P PPG
Sbjct: 208 AGPPGPSGQPGSNGNAGAPGAPGQVVDVPGTP-GPAGPPG 246
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = +3
Query: 564 CSAGTPRPAWTTRGRPGTPGQPRVNQDYPGTTWTPQAPPGQ 686
C G PA T G+PG PG+P PG P PP Q
Sbjct: 100 CLPGAAGPAGTP-GKPGRPGKPGA----PGLPGNPGRPPQQ 135
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = +3
Query: 603 GRPGTPGQPRVNQDYPGTTWTPQAPPGQ 686
G PG PGQP QD P TP AP Q
Sbjct: 196 GAPGAPGQP--GQDAPSEPITPGAPGPQ 221
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = +3
Query: 603 GRPGTPGQPRVNQDYPGTTWTPQAPPGQ 686
G PG PGQP QD P TP AP Q
Sbjct: 163 GAPGAPGQP--GQDAPSEPITPGAPGPQ 188
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = +3
Query: 564 CSAGTPRPAWTTRGRPGTPGQPRVNQDYPGTTWTPQAPPGQ 686
C G PA T G+PG PG+P PG P PP Q
Sbjct: 67 CLPGAAGPAGTP-GKPGRPGKPGA----PGLPGNPGHPPQQ 102
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = +3
Query: 564 CSAGTPRPAWTTRGRPGTPGQPRVNQDYPGTTWTPQAPPGQ 686
C G PA T G+PG PG+P PG P PP Q
Sbjct: 100 CLPGAAGPAGTP-GKPGRPGKPGA----PGLPGNPGRPPQQ 135
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = +3
Query: 603 GRPGTPGQPRVNQDYPGTTWTPQAPPGQ 686
G PG PGQP QD P TP AP Q
Sbjct: 196 GAPGAPGQP--GQDAPSEPITPGAPGPQ 221
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = +3
Query: 564 CSAGTPRPAWTTRGRPGTPGQPRVNQDYPGTTWTPQAPPGQ 686
C G PA T G+PG PG+P PG P PP Q
Sbjct: 100 CLPGAAGPAGTP-GKPGRPGKPGA----PGLPGNPGRPPQQ 135
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +3
Query: 603 GRPGTPGQPRVNQDYPGTTWTPQAP 677
G PG PGQP QD P TP AP
Sbjct: 196 GAPGAPGQP--GQDAPSEPITPGAP 218
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = +3
Query: 564 CSAGTPRPAWTTRGRPGTPGQPRVNQDYPGTTWTPQAPPGQ 686
C G PA T G+PG PG+P PG P PP Q
Sbjct: 100 CLPGAAGPAGTP-GKPGRPGKPGA----PGLPGNPGRPPQQ 135
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +3
Query: 603 GRPGTPGQPRVNQDYPGTTWTPQAP 677
G PG PGQP QD P TP AP
Sbjct: 196 GAPGAPGQP--GQDAPSEPITPGAP 218
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = +3
Query: 564 CSAGTPRPAWTTRGRPGTPGQPRVNQDYPGTTWTPQAPPGQ 686
C G PA T G+PG PG+P PG P PP Q
Sbjct: 100 CLPGAAGPAGTP-GKPGRPGKPGA----PGLPGNPGRPPQQ 135
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +3
Query: 603 GRPGTPGQPRVNQDYPGTTWTPQAP 677
G PG PGQP QD P TP AP
Sbjct: 196 GAPGAPGQP--GQDAPSEPITPGAP 218
>Z34801-3|CAA84327.1| 520|Caenorhabditis elegans Hypothetical
protein F59A2.2 protein.
Length = 520
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = +2
Query: 401 QDTQVSQASRDTLDNQDSQEHQANRVSQDNQGSPEHQDKQVNQATQDKVDNL*SLLSRDT 580
Q + Q T+DN DS + + + Q Q + E ++N++ Q NL + +
Sbjct: 254 QQDKKEQQQLITVDNDDSVDPRIREMEQRIQKTEEEWTNRINESDQQHAINL-ATTKAEM 312
Query: 581 QASLDNQ 601
A+L+N+
Sbjct: 313 HAALENK 319
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = +3
Query: 564 CSAGTPRPAWTTRGRPGTPGQPRVNQDYPGTTWTPQAPPGQ 686
C G PA T G+PG PG+P PG P PP Q
Sbjct: 100 CLPGAAGPAGTP-GKPGRPGKPGA----PGLPGNPGRPPQQ 135
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +3
Query: 603 GRPGTPGQPRVNQDYPGTTWTPQAP 677
G PG PGQP QD P TP AP
Sbjct: 196 GAPGAPGQP--GQDAPSEPITPGAP 218
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = +3
Query: 564 CSAGTPRPAWTTRGRPGTPGQPRVNQDYPGTTWTPQAPPGQ 686
C G PA T G+PG PG+P PG P PP Q
Sbjct: 100 CLPGAAGPAGTP-GKPGRPGKPGA----PGLPGNPGRPPQQ 135
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +3
Query: 603 GRPGTPGQPRVNQDYPGTTWTPQAP 677
G PG PGQP QD P TP AP
Sbjct: 196 GAPGAPGQP--GQDAPSEPITPGAP 218
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein
73 protein.
Length = 285
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/39 (46%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +3
Query: 573 GTPRPAWT--TRGRPGTPGQPRVNQDYPGTTWTPQAPPG 683
G P P T G GTPGQP PG T APPG
Sbjct: 177 GAPGPQGPPGTAGNDGTPGQPGA----PGQVRTVPAPPG 211
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 5/35 (14%)
Frame = +3
Query: 597 TRGRPGTPGQPRVNQDYPGTTWTP-----QAPPGQ 686
T G+PG PGQ R PG P Q PPG+
Sbjct: 193 TPGQPGAPGQVRTVPAPPGNPGQPGEPGAQGPPGE 227
>AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen protein
101 protein.
Length = 314
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +3
Query: 570 AGTPRPAWT--TRGRPGTPGQPRVNQDYPGTTWTPQAPPG 683
AG P P+ + G G PG P D PGT P PPG
Sbjct: 209 AGPPGPSGQPGSNGNAGAPGAPGHVVDVPGTP-GPAGPPG 247
>Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical
protein F52B11.4 protein.
Length = 304
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +3
Query: 564 CSAGTPRPAWTTRGRPGTPGQPRVNQDYPGTTWTPQAPP 680
C G PA T G+PG PG+P PG P A P
Sbjct: 105 CLPGAAGPAGTP-GKPGRPGRPGA-AGLPGNPGRPPAQP 141
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +3
Query: 564 CSAGTPRPAWTTRGRPGTPGQPRVNQDYPGTTWTPQAPP 680
C G PA T G+PG PG+P PG P A P
Sbjct: 105 CLPGAAGPAGTP-GKPGRPGRPGA-AGLPGNPGRPPAQP 141
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +3
Query: 564 CSAGTPRPAWTTRGRPGTPGQPRVNQDYPGTTWTPQAPP 680
C G PA T G+PG PG+P PG P A P
Sbjct: 105 CLPGAAGPAGTP-GKPGRPGRPGA-AGLPGNPGRPPAQP 141
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +3
Query: 564 CSAGTPRPAWTTRGRPGTPGQPRVNQDYPGTTWTPQAPP 680
C G PA T G+PG PG+P PG P A P
Sbjct: 105 CLPGAAGPAGTP-GKPGRPGRPGA-AGLPGNPGRPPAQP 141
>AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical
protein Y41C4A.19 protein.
Length = 289
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +3
Query: 564 CSAGTPRPAWTTRGRPGTPGQPRVNQDYPGTTWTPQAPP 680
C G PA T G+PG PG+P PG P A P
Sbjct: 89 CLPGAAGPAGTP-GKPGRPGRPGA-AGLPGNPGRPPAQP 125
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/83 (15%), Positives = 38/83 (45%)
Frame = +2
Query: 296 ASPEHQDNQGSPEHQDNQVNQATQDKVDSL*SLVSQDTQVSQASRDTLDNQDSQEHQANR 475
A E + + E + ++ +DK + +++ + + S+D + ++ +
Sbjct: 71 AEKEKNEKEKKEEEKKEDGHEKKEDKKED--KKENENDEKKEKSKDDKKEESKEDKKEKT 128
Query: 476 VSQDNQGSPEHQDKQVNQATQDK 544
++DN+G E + K+ + +D+
Sbjct: 129 KTEDNEGKNEEKKKEKKEEKKDE 151
>U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protein
111 protein.
Length = 332
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +3
Query: 573 GTPRPAWTT--RGRPGTPGQPRVNQDYPGTTWTPQAPPGQ 686
G P PA RG PG G P V ++ P P PPG+
Sbjct: 214 GEPGPAGYPGPRGAPGPVGPPGVAEEGPDGLPGPAGPPGK 253
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +2
Query: 395 VSQDTQVSQASRDTLDNQDSQEHQANRVSQDNQGSPEHQDKQVNQATQ 538
V++ T + +R+ + +D QEH GSP +K V + +
Sbjct: 5644 VTETTTTTTVTREHFEPEDDQEHVVESQEYSASGSPVPSEKSVEKVIE 5691
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +2
Query: 395 VSQDTQVSQASRDTLDNQDSQEHQANRVSQDNQGSPEHQDKQVNQATQ 538
V++ T + +R+ + +D QEH GSP +K V + +
Sbjct: 5644 VTETTTTTTVTREHFEPEDDQEHVVESQEYSASGSPVPSEKSVEKVIE 5691
>AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen
protein 116 protein.
Length = 313
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +3
Query: 564 CSAGTPRPAWTTRGRPGTPGQPRVNQDYPGTTWTPQ 671
C G P + G GTPG+P ++ D PGTT T Q
Sbjct: 107 CPPGPPG-IFGPPGEDGTPGEPGLDGD-PGTTATRQ 140
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/41 (43%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Frame = +3
Query: 573 GTPRPAWT--TRGRPGTPGQPRVNQDYPGTTWTPQA--PPG 683
G P PA T G PG PG P + PGT A PPG
Sbjct: 214 GPPGPAGNPGTDGAPGNPGAPGQVTETPGTPGPAGAAGPPG 254
>Z93239-2|CAB07529.2| 1218|Caenorhabditis elegans Hypothetical
protein H03A11.2 protein.
Length = 1218
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/44 (27%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +2
Query: 404 DTQVSQASRDT-LDNQDSQEHQANRVSQDNQGSPEHQDKQVNQA 532
++Q+++ +++ D S ++ +N+ QDN SP++ KQ +A
Sbjct: 249 NSQINELFKESGADRATSSKNTSNKTPQDNINSPKYSKKQAVKA 292
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +3
Query: 561 ACSAGTPRPAWTTRGRPGTPGQP-RVNQDYPGTTWT--PQAPPG 683
A SAG+P A G PG+PG+ + + PG + PQ PPG
Sbjct: 177 AGSAGSPGQAGAP-GNPGSPGKSGQRGRGLPGPSGAPGPQGPPG 219
>Z69660-2|CAD57697.1| 1218|Caenorhabditis elegans Hypothetical
protein H03A11.2 protein.
Length = 1218
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/44 (27%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +2
Query: 404 DTQVSQASRDT-LDNQDSQEHQANRVSQDNQGSPEHQDKQVNQA 532
++Q+++ +++ D S ++ +N+ QDN SP++ KQ +A
Sbjct: 249 NSQINELFKESGADRATSSKNTSNKTPQDNINSPKYSKKQAVKA 292
>Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical
protein ZC373.7 protein.
Length = 297
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +3
Query: 564 CSAGTPRPAWTTRGRPGTPGQPRVNQDYPGTTWTP 668
C G P P G+PGTPG P TT+ P
Sbjct: 103 CPPGPPGPPGPA-GQPGTPGAPGPKGQDSTTTFAP 136
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 603 GRPGTPGQPRVNQDYPGTTWTPQAPPG 683
G PGTPGQ R PG P P G
Sbjct: 198 GNPGTPGQVRSLPSPPGEPGQPGEPGG 224
>U55364-5|AAQ23124.1| 368|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 31,
isoform b protein.
Length = 368
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/74 (24%), Positives = 32/74 (43%)
Frame = +2
Query: 305 EHQDNQGSPEHQDNQVNQATQDKVDSL*SLVSQDTQVSQASRDTLDNQDSQEHQANRVSQ 484
++Q+ Q ++ N NQ Q + Q++Q Q S ++NQ Q + +
Sbjct: 281 QYQNTQYQQQNGQNGQNQFQQSNGQN------QNSQYQQTSNQQMNNQQYQTGDYQQTNT 334
Query: 485 DNQGSPEHQDKQVN 526
+ GSP +Q N
Sbjct: 335 QSMGSPNTGTQQSN 348
>U55364-4|AAA97972.1| 382|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 31,
isoform a protein.
Length = 382
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/74 (24%), Positives = 32/74 (43%)
Frame = +2
Query: 305 EHQDNQGSPEHQDNQVNQATQDKVDSL*SLVSQDTQVSQASRDTLDNQDSQEHQANRVSQ 484
++Q+ Q ++ N NQ Q + Q++Q Q S ++NQ Q + +
Sbjct: 295 QYQNTQYQQQNGQNGQNQFQQSNGQN------QNSQYQQTSNQQMNNQQYQTGDYQQTNT 348
Query: 485 DNQGSPEHQDKQVN 526
+ GSP +Q N
Sbjct: 349 QSMGSPNTGTQQSN 362
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 23.8 bits (49), Expect(2) = 8.4
Identities = 12/27 (44%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Frame = +3
Query: 603 GRPGTPGQ--PRVNQDYPGTTWTPQAP 677
G PG+PGQ PR PG P P
Sbjct: 241 GAPGSPGQPGPRGGPGEPGQDGAPGQP 267
Score = 22.2 bits (45), Expect(2) = 8.4
Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = +3
Query: 558 KACSAGTPRP-AWTTRGRPGTPGQP 629
K S G P P + +PG PGQP
Sbjct: 198 KPGSQGPPGPPGHSDEPKPGQPGQP 222
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 23.8 bits (49), Expect(2) = 8.5
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 573 GTPRPAWTTRGRPGTPGQP 629
G P+P + G PG PGQP
Sbjct: 201 GEPQPG--SPGEPGRPGQP 217
Score = 22.2 bits (45), Expect(2) = 8.5
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 603 GRPGTPGQPRVNQDYPG 653
G+PG PGQP +PG
Sbjct: 251 GQPGRPGQPG-RDGHPG 266
>Z19152-2|CAA79544.1| 1150|Caenorhabditis elegans Hypothetical protein
B0464.2 protein.
Length = 1150
Score = 27.5 bits (58), Expect = 9.5
Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 3/96 (3%)
Frame = +2
Query: 401 QDTQVSQASRDTLDNQDSQEHQANRVSQDNQGSPEHQDKQVNQ---ATQDKVDNL*SLLS 571
+D +ASR + +DS +NR + + E +D+++ + A Q + LS
Sbjct: 979 KDKAAKKASRKKRERRDSGGPDSNRRDEKKRKRKEERDRKLQEKLSAKQSAKIKSRAFLS 1038
Query: 572 RDTQASLDNQGQARNTRTTQGQPGLPRNNLDTPGAT 679
+ D A ++ + P P + D+P T
Sbjct: 1039 SSESSDDDKPKPAADSSDDEVDPRPPVDEFDSPTRT 1074
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 27.5 bits (58), Expect = 9.5
Identities = 19/45 (42%), Positives = 20/45 (44%), Gaps = 7/45 (15%)
Frame = +3
Query: 570 AGTPRPAWT-----TRGRPGTPGQPRVNQDYPGTTWTPQA--PPG 683
AG P P T T G PG PG P + PGT A PPG
Sbjct: 200 AGPPGPPGTSGNPGTDGAPGNPGAPGQVTETPGTPGPAGAAGPPG 244
>CU457737-9|CAM36330.1| 281|Caenorhabditis elegans Hypothetical
protein C52D10.13 protein.
Length = 281
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -1
Query: 682 PGGAWGVQVVPG*SWLTLGCPGVPGLPLVVQAGLGVPAE 566
P G G PG LG PG PG+ V + +G P E
Sbjct: 177 PAGPVGADGEPG----ELGAPGAPGVQRTVASPVGEPGE 211
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +3
Query: 573 GTPRPAWT--TRGRPGTPGQP-RVNQDYPGTTWTPQAPPG 683
G P PA + G+PG PGQP R ++ G + P PPG
Sbjct: 221 GAPGPAGDAGSPGQPGAPGQPGRPGKNAQGGSSRP-GPPG 259
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 603 GRPGTPGQPRVNQDYPGTTWTPQAPPG 683
G PG PG P + PGT P PPG
Sbjct: 237 GNPGAPGVPGQVIEVPGTP-GPAGPPG 262
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.308 0.130 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,025,616
Number of Sequences: 27780
Number of extensions: 135038
Number of successful extensions: 979
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 852
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
- SilkBase 1999-2023 -