Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5772
         (706 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    25   0.92 
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    23   3.7  
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              23   3.7  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    23   3.7  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    23   3.7  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 238 HKYIQQDPREALVDTFNNRVEILQELKILYERS 336
           H Y +Q PR+    T +   ++LQE +  Y  S
Sbjct: 329 HDYSRQFPRDLTTQTVSTTADVLQEEEEEYSPS 361


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +3

Query: 141 GVRWSWWTCLCPSYIKEIG*LHSSRTSAHRNIAQVHSAG 257
           G  W+W T L P+++        S  SAH    +   AG
Sbjct: 67  GSNWNWNTLLRPNFLDGWYQTLQSAISAHMKKVREQMAG 105


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 377 SCGKLANSAKYCLK 336
           +CG +A++ KYC K
Sbjct: 80  ACGDIAHTVKYCPK 93


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +3

Query: 141 GVRWSWWTCLCPSYIKEIG*LHSSRTSAHRNIAQVHSAG 257
           G  W+W T L P+++        S  SAH    +   AG
Sbjct: 67  GSNWNWNTLLRPNFLDGWYQTLQSAISAHMKKVREQMAG 105


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +3

Query: 141 GVRWSWWTCLCPSYIKEIG*LHSSRTSAHRNIAQVHSAG 257
           G  W+W T L P+++        S  SAH    +   AG
Sbjct: 67  GSNWNWNTLLRPNFLDGWYQTLQSAISAHMKKVREQMAG 105


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.134    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,375
Number of Sequences: 438
Number of extensions: 4613
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)